RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 CRTC3Q6UUV7 619 aa8.13□□□□□ -1.11
HDAC9-221ENST00000471887 C6orf15Q6UXA7 325 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-221ENST00000471887 ATG4DQ86TL0 474 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-221ENST00000471887 HNRNPLLQ8WVV9 542 aaKnown RBP8.13□□□□□ -1.11
HDAC9-221ENST00000471887 DHX38Q92620 1227 aaKnown RBP8.13□□□□□ -1.11
HDAC9-221ENST00000471887 ANKRD34BA5PLL1 514 aa8.12□□□□□ -1.11
HDAC9-221ENST00000471887 DDAH1O94760 285 aa8.12□□□□□ -1.11
HDAC9-221ENST00000471887 NAT2P11245 290 aa8.12□□□□□ -1.11
HDAC9-221ENST00000471887 RPL10P27635 214 aaKnown RBP8.12□□□□□ -1.11
HDAC9-221ENST00000471887 FAM178BQ8IXR5 827 aa8.12□□□□□ -1.11
HDAC9-221ENST00000471887 FIBCD1Q8N539 461 aa8.12□□□□□ -1.11
HDAC9-221ENST00000471887 FGD4Q96M96 766 aa8.12□□□□□ -1.11
HDAC9-221ENST00000471887 ADAMTS10Q9H324 1103 aa8.12□□□□□ -1.11
HDAC9-221ENST00000471887 NOL6Q9H6R4 1146 aaKnown RBP8.12□□□□□ -1.11
HDAC9-221ENST00000471887 PPP1R1BQ9UD71 204 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-221ENST00000471887 CTNND2Q9UQB3 1225 aa8.12□□□□□ -1.11
HDAC9-221ENST00000471887 DIS3Q9Y2L1 958 aaKnown RBP8.12□□□□□ -1.11
HDAC9-221ENST00000471887 SF3B6Q9Y3B4 125 aaKnown RBP8.12□□□□□ -1.11
HDAC9-221ENST00000471887 H0Y8X5 98 aa8.11□□□□□ -1.11
HDAC9-221ENST00000471887 TAL1P17542 331 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-221ENST00000471887 ENDOUP21128 410 aaKnown RBP8.11□□□□□ -1.11
HDAC9-221ENST00000471887 ZNF143P52747 638 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-221ENST00000471887 DUSP4Q13115 394 aa8.11□□□□□ -1.11
HDAC9-221ENST00000471887 CKAP2LQ8IYA6 745 aa8.11□□□□□ -1.11
HDAC9-221ENST00000471887 FLAD1Q8NFF5 587 aa8.11□□□□□ -1.11
HDAC9-221ENST00000471887 C19orf73Q9NVV2 129 aa8.11□□□□□ -1.11
HDAC9-221ENST00000471887 SUGT1Q9Y2Z0 365 aa8.11□□□□□ -1.11
HDAC9-221ENST00000471887 KLF4O43474 513 aa8.1□□□□□ -1.11
HDAC9-221ENST00000471887 FKTNO75072 461 aa8.1□□□□□ -1.11
HDAC9-221ENST00000471887 ZNF205O95201 554 aa8.1□□□□□ -1.11
HDAC9-221ENST00000471887 ZGLP1P0C6A0 271 aa8.1□□□□□ -1.11
HDAC9-221ENST00000471887 GTF2F1P35269 517 aaKnown RBP eCLIP8.1□□□□□ -1.11
HDAC9-221ENST00000471887 HK2P52789 917 aa8.1□□□□□ -1.11
HDAC9-221ENST00000471887 WAPLQ7Z5K2 1190 aa8.1□□□□□ -1.11
HDAC9-221ENST00000471887 ADCY4Q8NFM4 1077 aa8.1□□□□□ -1.11
HDAC9-221ENST00000471887 ARMC5Q96C12 935 aa8.1□□□□□ -1.11
HDAC9-221ENST00000471887 APBA2Q99767 749 aa8.1□□□□□ -1.11
HDAC9-221ENST00000471887 SUSD2Q9UGT4 822 aa8.1□□□□□ -1.11
HDAC9-221ENST00000471887 ZNF281Q9Y2X9 895 aa8.1□□□□□ -1.11
HDAC9-221ENST00000471887 TMEM82A0PJX8 343 aa8.09□□□□□ -1.11
HDAC9-221ENST00000471887 B2RBV5 119 aa8.09□□□□□ -1.11
HDAC9-221ENST00000471887 RAC2P15153 192 aa8.09□□□□□ -1.11
HDAC9-221ENST00000471887 VAV1P15498 845 aa8.09□□□□□ -1.11
HDAC9-221ENST00000471887 JUNBP17275 347 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-221ENST00000471887 ITGB5P18084 799 aa8.09□□□□□ -1.11
HDAC9-221ENST00000471887 AFMP43652 599 aa8.09□□□□□ -1.11
HDAC9-221ENST00000471887 NOP2P46087 812 aaKnown RBP8.09□□□□□ -1.11
HDAC9-221ENST00000471887 PPP2R5DQ14738 602 aa8.09□□□□□ -1.11
HDAC9-221ENST00000471887 MCTP1Q6DN14 999 aa8.09□□□□□ -1.11
HDAC9-221ENST00000471887 CELF2-AS1Q8N7Q2 184 aa8.09□□□□□ -1.11
HDAC9-221ENST00000471887 PDZD8Q8NEN9 1154 aa8.09□□□□□ -1.11
HDAC9-221ENST00000471887 RCC1LQ96I51 464 aaKnown RBP8.09□□□□□ -1.11
HDAC9-221ENST00000471887 TRIM55Q9BYV6 548 aa8.09□□□□□ -1.11
HDAC9-221ENST00000471887 ZMYM5Q9UJ78 669 aa8.09□□□□□ -1.11
HDAC9-221ENST00000471887 GJB6O95452 261 aa8.08□□□□□ -1.12
HDAC9-221ENST00000471887 POU4F1Q01851 419 aa8.08□□□□□ -1.12
HDAC9-221ENST00000471887 RAB33AQ14088 237 aa8.08□□□□□ -1.12
HDAC9-221ENST00000471887 DDR2Q16832 855 aa8.08□□□□□ -1.12
HDAC9-221ENST00000471887 OXR1Q8N573 874 aa8.08□□□□□ -1.12
HDAC9-221ENST00000471887 MICAL1Q8TDZ2 1067 aa8.08□□□□□ -1.12
HDAC9-221ENST00000471887 ZDHHC15Q96MV8 337 aa8.08□□□□□ -1.12
HDAC9-221ENST00000471887 HIRIP3Q9BW71 556 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-221ENST00000471887 CDADC1Q9BWV3 514 aa8.08□□□□□ -1.12
HDAC9-221ENST00000471887 ST7Q9NRC1 585 aa8.08□□□□□ -1.12
HDAC9-221ENST00000471887 U2SURPO15042 1029 aaKnown RBP8.07□□□□□ -1.12
HDAC9-221ENST00000471887 PAPLNO95428 1278 aa8.07□□□□□ -1.12
HDAC9-221ENST00000471887 CHRNEQ04844 493 aa8.07□□□□□ -1.12
HDAC9-221ENST00000471887 EEPD1Q7L9B9 569 aa8.07□□□□□ -1.12
HDAC9-221ENST00000471887 ARHGEF39Q8N4T4 335 aa8.07□□□□□ -1.12
HDAC9-221ENST00000471887 CRACR2BQ8N4Y2 399 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-221ENST00000471887 ANKS4BQ8N8V4 417 aa8.07□□□□□ -1.12
HDAC9-221ENST00000471887 SREK1Q8WXA9 508 aaKnown RBP8.07□□□□□ -1.12
HDAC9-221ENST00000471887 FCRL2Q96LA5 508 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-221ENST00000471887 APEX2Q9UBZ4 518 aa8.07□□□□□ -1.12
HDAC9-221ENST00000471887 CGGBP1Q9UFW8 167 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-221ENST00000471887 FITM1A5D6W6 292 aa8.06□□□□□ -1.12
HDAC9-221ENST00000471887 SUSD5O60279 629 aa8.06□□□□□ -1.12
HDAC9-221ENST00000471887 HPXP02790 462 aa8.06□□□□□ -1.12
HDAC9-221ENST00000471887 NBPF6Q5VWK0 638 aa8.06□□□□□ -1.12
HDAC9-221ENST00000471887 MRM1Q6IN84 353 aaKnown RBP8.06□□□□□ -1.12
HDAC9-221ENST00000471887 ZPBP2Q6X784 338 aa8.06□□□□□ -1.12
HDAC9-221ENST00000471887 SPPL2CQ8IUH8 684 aa8.06□□□□□ -1.12
HDAC9-221ENST00000471887 ZNF513Q8N8E2 541 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-221ENST00000471887 BVESQ8NE79 360 aa8.06□□□□□ -1.12
HDAC9-221ENST00000471887 LINC01599Q8WXQ3 324 aa8.06□□□□□ -1.12
HDAC9-221ENST00000471887 PPP1R14AQ96A00 147 aa8.06□□□□□ -1.12
HDAC9-221ENST00000471887 KIRREL1Q96J84 757 aa8.06□□□□□ -1.12
HDAC9-221ENST00000471887 MAP6Q96JE9 813 aa8.06□□□□□ -1.12
HDAC9-221ENST00000471887 NBPF4Q96M43 638 aa8.06□□□□□ -1.12
HDAC9-221ENST00000471887 G6PC3Q9BUM1 346 aa8.06□□□□□ -1.12
HDAC9-221ENST00000471887 SLC12A9Q9BXP2 914 aa8.06□□□□□ -1.12
HDAC9-221ENST00000471887 AP5S1Q9NUS5 200 aa8.06□□□□□ -1.12
HDAC9-221ENST00000471887 AKT3Q9Y243 479 aa8.06□□□□□ -1.12
HDAC9-221ENST00000471887 NOP56O00567 594 aaKnown RBP8.05□□□□□ -1.12
HDAC9-221ENST00000471887 CD3EP07766 207 aa8.05□□□□□ -1.12
HDAC9-221ENST00000471887 GSTM1P09488 218 aa8.05□□□□□ -1.12
HDAC9-221ENST00000471887 GRB10Q13322 594 aa8.05□□□□□ -1.12
HDAC9-221ENST00000471887 SV2CQ496J9 727 aa8.05□□□□□ -1.12
HDAC9-221ENST00000471887 RTP2Q5QGT7 225 aa8.05□□□□□ -1.12
HDAC9-221ENST00000471887 POMZP3Q6PJE2 187 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms