RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 STAT2P52630 851 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 C1QTNF8P60827 252 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 HTRA3P83110 453 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 USP17L24Q0WX57 530 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 DEFB115Q30KQ5 88 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 CMTR1Q8N1G2 835 aaKnown RBP12.96□□□□□ -0.33
VCP-204ENST00000466100 SMARCC2Q8TAQ2 1214 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 CAPNS2Q96L46 248 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 ZIC5Q96T25 663 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 LZTS2Q9BRK4 669 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 FEM1BQ9UK73 627 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 PPP1R9AQ9ULJ8 1098 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 MYPNQ86TC9 1320 aa12.95□□□□□ -0.34
VCP-204ENST00000466100 IGF2BP3O00425 579 aaKnown RBP eCLIP12.95□□□□□ -0.34
VCP-204ENST00000466100 JAK2O60674 1132 aa12.95□□□□□ -0.34
VCP-204ENST00000466100 DTNBO60941 627 aa12.95□□□□□ -0.34
VCP-204ENST00000466100 SLC16A2P36021 539 aa12.95□□□□□ -0.34
VCP-204ENST00000466100 ANP32AP39687 249 aaKnown RBP12.95□□□□□ -0.34
VCP-204ENST00000466100 SYDE2Q5VT97 1194 aa12.95□□□□□ -0.34
VCP-204ENST00000466100 POTEEQ6S8J3 1075 aa12.95□□□□□ -0.34
VCP-204ENST00000466100 ANKRD23Q86SG2 305 aa12.95□□□□□ -0.34
VCP-204ENST00000466100 FAM160B2Q86V87 743 aa12.95□□□□□ -0.34
VCP-204ENST00000466100 ADGRF4Q8IZF3 695 aa12.95□□□□□ -0.34
VCP-204ENST00000466100 FAM43AQ8N2R8 423 aa12.95□□□□□ -0.34
VCP-204ENST00000466100 SLF1Q9BQI6 1058 aa12.95□□□□□ -0.34
VCP-204ENST00000466100 LLPHQ9BRT6 129 aaKnown RBP12.95□□□□□ -0.34
VCP-204ENST00000466100 TANGO6Q9C0B7 1094 aa12.95□□□□□ -0.34
VCP-204ENST00000466100 UBA5Q9GZZ9 404 aa12.95□□□□□ -0.34
VCP-204ENST00000466100 JMJD4Q9H9V9 463 aa12.95□□□□□ -0.34
VCP-204ENST00000466100 PRR12Q9ULL5 1215 aa12.95□□□□□ -0.34
VCP-204ENST00000466100 ADAMTS5Q9UNA0 930 aa12.95□□□□□ -0.34
VCP-204ENST00000466100 SLC45A1Q9Y2W3 748 aa12.95□□□□□ -0.34
VCP-204ENST00000466100 STK36Q9NRP7 1315 aa12.94□□□□□ -0.34
VCP-204ENST00000466100 PTPDC1A2A3K4 754 aa12.94□□□□□ -0.34
VCP-204ENST00000466100 SPDYE16A6NNV3 312 aaPredicted RBP12.94□□□□□ -0.34
VCP-204ENST00000466100 DHX16O60231 1041 aaKnown RBP12.94□□□□□ -0.34
VCP-204ENST00000466100 FLOT1O75955 427 aa12.94□□□□□ -0.34
VCP-204ENST00000466100 FMNL1O95466 1100 aaPredicted RBP12.94□□□□□ -0.34
VCP-204ENST00000466100 HSPA6P17066 643 aa12.94□□□□□ -0.34
VCP-204ENST00000466100 NOGQ13253 232 aa12.94□□□□□ -0.34
VCP-204ENST00000466100 BECN1Q14457 450 aa12.94□□□□□ -0.34
VCP-204ENST00000466100 LBX2Q6XYB7 198 aa12.94□□□□□ -0.34
VCP-204ENST00000466100 REPS2Q8NFH8 660 aa12.94□□□□□ -0.34
VCP-204ENST00000466100 CHURC1Q8WUH1 139 aa12.94□□□□□ -0.34
VCP-204ENST00000466100 PHKBQ93100 1093 aa12.94□□□□□ -0.34
VCP-204ENST00000466100 INTS4Q96HW7 963 aaKnown RBP12.94□□□□□ -0.34
VCP-204ENST00000466100 RNF26Q9BY78 433 aaPredicted RBP12.94□□□□□ -0.34
VCP-204ENST00000466100 ASCC2Q9H1I8 757 aaPredicted RBP12.94□□□□□ -0.34
VCP-204ENST00000466100 ZCCHC17Q9NP64 241 aaKnown RBP12.94□□□□□ -0.34
VCP-204ENST00000466100 ADGRA2Q96PE1 1338 aa12.93□□□□□ -0.34
VCP-204ENST00000466100 WDR33Q9C0J8 1336 aaKnown RBP12.93□□□□□ -0.34
VCP-204ENST00000466100 CPLX1O14810 134 aa12.93□□□□□ -0.34
VCP-204ENST00000466100 AOC2O75106 756 aa12.93□□□□□ -0.34
VCP-204ENST00000466100 FDPSP14324 419 aaKnown RBP12.93□□□□□ -0.34
VCP-204ENST00000466100 DSG3P32926 999 aa12.93□□□□□ -0.34
VCP-204ENST00000466100 TM4SF4P48230 202 aa12.93□□□□□ -0.34
VCP-204ENST00000466100 VEGFBP49765 207 aa12.93□□□□□ -0.34
VCP-204ENST00000466100 KIF23Q02241 960 aaPredicted RBP12.93□□□□□ -0.34
VCP-204ENST00000466100 PKN1Q16512 942 aa12.93□□□□□ -0.34
VCP-204ENST00000466100 PAXIP1Q6ZW49 1069 aaPredicted RBP12.93□□□□□ -0.34
VCP-204ENST00000466100 CCDC82Q8N4S0 544 aa12.93□□□□□ -0.34
VCP-204ENST00000466100 PRPF38AQ8NAV1 312 aaKnown RBP12.93□□□□□ -0.34
VCP-204ENST00000466100 ATG4CQ96DT6 458 aa12.93□□□□□ -0.34
VCP-204ENST00000466100 RANBP17Q9H2T7 1088 aaKnown RBP12.93□□□□□ -0.34
VCP-204ENST00000466100 ISY1Q9ULR0 285 aaKnown RBP12.93□□□□□ -0.34
VCP-204ENST00000466100 LCTP09848 1927 aa12.92□□□□□ -0.34
VCP-204ENST00000466100 PDHXO00330 501 aa12.92□□□□□ -0.34
VCP-204ENST00000466100 PRPF3O43395 683 aaKnown RBP12.92□□□□□ -0.34
VCP-204ENST00000466100 PPP1R11O60927 126 aaPredicted RBP12.92□□□□□ -0.34
VCP-204ENST00000466100 PPFIA3O75145 1194 aa12.92□□□□□ -0.34
VCP-204ENST00000466100 CDKL5O76039 1030 aa12.92□□□□□ -0.34
VCP-204ENST00000466100 INHBEP58166 350 aa12.92□□□□□ -0.34
VCP-204ENST00000466100 SREBF2Q12772 1141 aa12.92□□□□□ -0.34
VCP-204ENST00000466100 PABPC4Q13310 644 aaKnown RBP eCLIP12.92□□□□□ -0.345e-10■□□□□ 8.9
VCP-204ENST00000466100 COG2Q14746 738 aa12.92□□□□□ -0.34
VCP-204ENST00000466100 CDC37Q16543 378 aaPredicted RBP12.92□□□□□ -0.34
VCP-204ENST00000466100 CPLX2Q6PUV4 134 aaKnown RBP12.92□□□□□ -0.34
VCP-204ENST00000466100 IFNL1Q8IU54 200 aa12.92□□□□□ -0.34
VCP-204ENST00000466100 KIFC2Q96AC6 838 aa12.92□□□□□ -0.34
VCP-204ENST00000466100 SHISA4Q96DD7 197 aa12.92□□□□□ -0.34
VCP-204ENST00000466100 PIGSQ96S52 555 aa12.92□□□□□ -0.34
VCP-204ENST00000466100 P2RX7Q99572 595 aaKnown RBP12.92□□□□□ -0.34
VCP-204ENST00000466100 SLC26A6Q9BXS9 759 aa12.92□□□□□ -0.34
VCP-204ENST00000466100 SLC38A10Q9HBR0 1119 aa12.92□□□□□ -0.34
VCP-204ENST00000466100 ZNF536O15090 1300 aa12.91□□□□□ -0.34
VCP-204ENST00000466100 hCG_1642624A0A1W2PR95 340 aa12.91□□□□□ -0.34
VCP-204ENST00000466100 VWA5AO00534 786 aa12.91□□□□□ -0.34
VCP-204ENST00000466100 ZBTB5O15062 677 aa12.91□□□□□ -0.34
VCP-204ENST00000466100 CNMDO75829 334 aa12.91□□□□□ -0.34
VCP-204ENST00000466100 SNAP25P60880 206 aa12.91□□□□□ -0.34
VCP-204ENST00000466100 HERVK_113P62684 666 aa12.91□□□□□ -0.34
VCP-204ENST00000466100 IRX3P78415 501 aaPredicted RBP12.91□□□□□ -0.34
VCP-204ENST00000466100 IKQ13123 557 aaPredicted RBP12.91□□□□□ -0.34
VCP-204ENST00000466100 GRM1Q13255 1194 aa12.91□□□□□ -0.34
VCP-204ENST00000466100 PFKFB3Q16875 520 aaPredicted RBP12.91□□□□□ -0.34
VCP-204ENST00000466100 QRICH1Q2TAL8 776 aa12.91□□□□□ -0.34
VCP-204ENST00000466100 RBM27Q9P2N5 1060 aaKnown RBP12.91□□□□□ -0.34
VCP-204ENST00000466100 PNMA3Q9UL41 463 aa12.91□□□□□ -0.34
VCP-204ENST00000466100 V9GY48 417 aaPredicted RBP12.91□□□□□ -0.34
VCP-204ENST00000466100 HTTP42858 3142 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms