RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 RCC1LQ96I51 464 aaKnown RBP9.31□□□□□ -0.92
PTCD3-205ENST00000464541 APBA2Q99767 749 aa9.31□□□□□ -0.92
PTCD3-205ENST00000464541 KRTAP4-6Q9BYQ5 205 aa9.31□□□□□ -0.92
PTCD3-205ENST00000464541 RC3H2Q9HBD1 1191 aaKnown RBP9.31□□□□□ -0.92
PTCD3-205ENST00000464541 SUSD2Q9UGT4 822 aa9.31□□□□□ -0.92
PTCD3-205ENST00000464541 TCFL5Q9UL49 500 aa9.31□□□□□ -0.92
PTCD3-205ENST00000464541 DDAH1O94760 285 aa9.3□□□□□ -0.92
PTCD3-205ENST00000464541 GTF2F1P35269 517 aaKnown RBP eCLIP9.3□□□□□ -0.92
PTCD3-205ENST00000464541 CTSKP43235 329 aa9.3□□□□□ -0.92
PTCD3-205ENST00000464541 DDR2Q16832 855 aa9.3□□□□□ -0.92
PTCD3-205ENST00000464541 FIBCD1Q8N539 461 aa9.3□□□□□ -0.92
PTCD3-205ENST00000464541 TRIM55Q9BYV6 548 aa9.3□□□□□ -0.92
PTCD3-205ENST00000464541 EPN3Q9H201 632 aa9.3□□□□□ -0.92
PTCD3-205ENST00000464541 SLAMF8Q9P0V8 285 aa9.3□□□□□ -0.92
PTCD3-205ENST00000464541 TMEM59LQ9UK28 342 aa9.3□□□□□ -0.92
PTCD3-205ENST00000464541 ZNF205O95201 554 aa9.29□□□□□ -0.92
PTCD3-205ENST00000464541 SYPP08247 313 aa9.29□□□□□ -0.92
PTCD3-205ENST00000464541 GDNFP39905 211 aa9.29□□□□□ -0.92
PTCD3-205ENST00000464541 IRAK1P51617 712 aa9.29□□□□□ -0.92
PTCD3-205ENST00000464541 DUSP4Q13115 394 aa9.29□□□□□ -0.92
PTCD3-205ENST00000464541 EEPD1Q7L9B9 569 aa9.29□□□□□ -0.92
PTCD3-205ENST00000464541 ADAT2Q7Z6V5 191 aaKnown RBP9.29□□□□□ -0.92
PTCD3-205ENST00000464541 CRACR2BQ8N4Y2 399 aaPredicted RBP9.29□□□□□ -0.92
PTCD3-205ENST00000464541 FLAD1Q8NFF5 587 aa9.29□□□□□ -0.92
PTCD3-205ENST00000464541 PRDM7Q9NQW5 492 aa9.29□□□□□ -0.92
PTCD3-205ENST00000464541 PPP1R1BQ9UD71 204 aaPredicted RBP9.29□□□□□ -0.92
PTCD3-205ENST00000464541 BIN1O00499 593 aa9.28□□□□□ -0.92
PTCD3-205ENST00000464541 U2SURPO15042 1029 aaKnown RBP9.28□□□□□ -0.92
PTCD3-205ENST00000464541 NOP2P46087 812 aaKnown RBP9.28□□□□□ -0.92
PTCD3-205ENST00000464541 GRB10Q13322 594 aa9.28□□□□□ -0.92
PTCD3-205ENST00000464541 ATG4DQ86TL0 474 aaPredicted RBP9.28□□□□□ -0.92
PTCD3-205ENST00000464541 ARHGEF39Q8N4T4 335 aa9.28□□□□□ -0.92
PTCD3-205ENST00000464541 LRRN4CLQ8ND94 238 aa9.28□□□□□ -0.92
PTCD3-205ENST00000464541 BRF1Q92994 677 aa9.28□□□□□ -0.92
PTCD3-205ENST00000464541 DRC1Q96MC2 740 aa9.28□□□□□ -0.92
PTCD3-205ENST00000464541 FOXP3Q9BZS1 431 aa9.28□□□□□ -0.92
PTCD3-205ENST00000464541 MINPP1Q9UNW1 487 aa9.28□□□□□ -0.92
PTCD3-205ENST00000464541 MEIS1O00470 390 aa9.27□□□□□ -0.93
PTCD3-205ENST00000464541 GJB6O95452 261 aa9.27□□□□□ -0.93
PTCD3-205ENST00000464541 VAV1P15498 845 aa9.27□□□□□ -0.93
PTCD3-205ENST00000464541 POU4F1Q01851 419 aa9.27□□□□□ -0.93
PTCD3-205ENST00000464541 XP32Q5T750 250 aa9.27□□□□□ -0.93
PTCD3-205ENST00000464541 POMZP3Q6PJE2 187 aa9.27□□□□□ -0.93
PTCD3-205ENST00000464541 CRTC3Q6UUV7 619 aa9.27□□□□□ -0.93
PTCD3-205ENST00000464541 CELF2-AS1Q8N7Q2 184 aa9.27□□□□□ -0.93
PTCD3-205ENST00000464541 MICAL1Q8TDZ2 1067 aa9.27□□□□□ -0.93
PTCD3-205ENST00000464541 NOL6Q9H6R4 1146 aaKnown RBP9.27□□□□□ -0.93
PTCD3-205ENST00000464541 CTNND2Q9UQB3 1225 aa9.27□□□□□ -0.93
PTCD3-205ENST00000464541 DNAJC25-GNG10A0A024R161 153 aa9.26□□□□□ -0.93
PTCD3-205ENST00000464541 B2RBV5 119 aa9.26□□□□□ -0.93
PTCD3-205ENST00000464541 H0Y8X5 98 aa9.26□□□□□ -0.93
PTCD3-205ENST00000464541 SUSD5O60279 629 aa9.26□□□□□ -0.93
PTCD3-205ENST00000464541 ZNF513Q8N8E2 541 aaPredicted RBP9.26□□□□□ -0.93
PTCD3-205ENST00000464541 FGD4Q96M96 766 aa9.26□□□□□ -0.93
PTCD3-205ENST00000464541 ADAMTS10Q9H324 1103 aa9.26□□□□□ -0.93
PTCD3-205ENST00000464541 SIRPGQ9P1W8 387 aa9.26□□□□□ -0.93
PTCD3-205ENST00000464541 CGGBP1Q9UFW8 167 aaPredicted RBP9.26□□□□□ -0.93
PTCD3-205ENST00000464541 SUGT1Q9Y2Z0 365 aa9.26□□□□□ -0.93
PTCD3-205ENST00000464541 TMEM82A0PJX8 343 aa9.25□□□□□ -0.93
PTCD3-205ENST00000464541 ZGLP1P0C6A0 271 aa9.25□□□□□ -0.93
PTCD3-205ENST00000464541 JUNBP17275 347 aaPredicted RBP9.25□□□□□ -0.93
PTCD3-205ENST00000464541 CHRNEQ04844 493 aa9.25□□□□□ -0.93
PTCD3-205ENST00000464541 RALGPS1Q5JS13 557 aa9.25□□□□□ -0.93
PTCD3-205ENST00000464541 OXR1Q8N573 874 aa9.25□□□□□ -0.93
PTCD3-205ENST00000464541 BVESQ8NE79 360 aa9.25□□□□□ -0.93
PTCD3-205ENST00000464541 PDZD8Q8NEN9 1154 aa9.25□□□□□ -0.93
PTCD3-205ENST00000464541 NOP56O00567 594 aaKnown RBP9.24□□□□□ -0.93
PTCD3-205ENST00000464541 RAC2P15153 192 aa9.24□□□□□ -0.93
PTCD3-205ENST00000464541 ITGB5P18084 799 aa9.24□□□□□ -0.93
PTCD3-205ENST00000464541 RPL10P27635 214 aaKnown RBP9.24□□□□□ -0.93
PTCD3-205ENST00000464541 AFMP43652 599 aa9.24□□□□□ -0.93
PTCD3-205ENST00000464541 MRM1Q6IN84 353 aaKnown RBP9.24□□□□□ -0.93
PTCD3-205ENST00000464541 WAPLQ7Z5K2 1190 aa9.24□□□□□ -0.93
PTCD3-205ENST00000464541 ANKS4BQ8N8V4 417 aa9.24□□□□□ -0.93
PTCD3-205ENST00000464541 ADCY4Q8NFM4 1077 aa9.24□□□□□ -0.93
PTCD3-205ENST00000464541 LINC01599Q8WXQ3 324 aa9.24□□□□□ -0.93
PTCD3-205ENST00000464541 ZNF669Q96BR6 464 aaPredicted RBP9.24□□□□□ -0.93
PTCD3-205ENST00000464541 FCRL2Q96LA5 508 aaPredicted RBP9.24□□□□□ -0.93
PTCD3-205ENST00000464541 SLC12A9Q9BXP2 914 aa9.24□□□□□ -0.93
PTCD3-205ENST00000464541 C19orf73Q9NVV2 129 aa9.24□□□□□ -0.93
PTCD3-205ENST00000464541 AKT3Q9Y243 479 aa9.24□□□□□ -0.93
PTCD3-205ENST00000464541 EMC9Q9Y3B6 208 aa9.24□□□□□ -0.93
PTCD3-205ENST00000464541 MSRB2Q9Y3D2 182 aa9.24□□□□□ -0.93
PTCD3-205ENST00000464541 FITM1A5D6W6 292 aa9.23□□□□□ -0.93
PTCD3-205ENST00000464541 KIR2DL1P43626 348 aaPredicted RBP9.23□□□□□ -0.93
PTCD3-205ENST00000464541 KIR2DL2P43627 348 aaPredicted RBP9.23□□□□□ -0.93
PTCD3-205ENST00000464541 NR0B2Q15466 257 aa9.23□□□□□ -0.93
PTCD3-205ENST00000464541 SPPL2CQ8IUH8 684 aa9.23□□□□□ -0.93
PTCD3-205ENST00000464541 ST13P5Q8NFI4 369 aaPredicted RBP9.23□□□□□ -0.93
PTCD3-205ENST00000464541 UBXN4Q92575 508 aa9.23□□□□□ -0.93
PTCD3-205ENST00000464541 ZDHHC15Q96MV8 337 aa9.23□□□□□ -0.93
PTCD3-205ENST00000464541 G6PC3Q9BUM1 346 aa9.23□□□□□ -0.93
PTCD3-205ENST00000464541 ST7Q9NRC1 585 aa9.23□□□□□ -0.93
PTCD3-205ENST00000464541 APEX2Q9UBZ4 518 aa9.23□□□□□ -0.93
PTCD3-205ENST00000464541 AGRPO00253 132 aa9.22□□□□□ -0.93
PTCD3-205ENST00000464541 HPXP02790 462 aa9.22□□□□□ -0.93
PTCD3-205ENST00000464541 AMPD2Q01433 879 aa9.22□□□□□ -0.93
PTCD3-205ENST00000464541 SERINC3Q13530 473 aa9.22□□□□□ -0.93
PTCD3-205ENST00000464541 PPP2R5DQ14738 602 aa9.22□□□□□ -0.93
PTCD3-205ENST00000464541 RTP2Q5QGT7 225 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms