RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 ANKRD39Q53RE8 183 aa4.47□□□□□ -1.69
VCL-203ENST00000461383 BEND4Q6ZU67 534 aa4.47□□□□□ -1.69
VCL-203ENST00000461383 ZNF227Q86WZ6 799 aa4.47□□□□□ -1.69
VCL-203ENST00000461383 CLEC10AQ8IUN9 316 aa4.47□□□□□ -1.69
VCL-203ENST00000461383 FAM20CQ8IXL6 584 aa4.47□□□□□ -1.69
VCL-203ENST00000461383 DHRS4Q9BTZ2 278 aa4.47□□□□□ -1.69
VCL-203ENST00000461383 NOL6Q9H6R4 1146 aaKnown RBP4.47□□□□□ -1.69
VCL-203ENST00000461383 GP6Q9HCN6 339 aa4.47□□□□□ -1.69
VCL-203ENST00000461383 PRDM5Q9NQX1 630 aaPredicted RBP4.47□□□□□ -1.69
VCL-203ENST00000461383 NOP58Q9Y2X3 529 aaKnown RBP4.47□□□□□ -1.69
VCL-203ENST00000461383 COL4A3BPQ9Y5P4 624 aa4.47□□□□□ -1.69
VCL-203ENST00000461383 PRODHO43272 600 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 ADCY3O60266 1144 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 APPP05067 770 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 FAM87AP0C7U9 286 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 GRIK1P39086 918 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 KCNJ6P48051 423 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 GP2P55259 537 aaKnown RBP4.46□□□□□ -1.7
VCL-203ENST00000461383 CLEC16AQ2KHT3 1053 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 CT47A1Q5JQC4 288 aaPredicted RBP4.46□□□□□ -1.7
VCL-203ENST00000461383 FAM209AQ5JX71 171 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 SFRP5Q5T4F7 317 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 NSMFQ6X4W1 530 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 ARHGAP27Q6ZUM4 889 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 SCUBE1Q8IWY4 988 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 BRF1Q92994 677 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 GPATCH3Q96I76 525 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 COX4I2Q96KJ9 171 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 FBXL18Q96ME1 805 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 TBC1D32Q96NH3 1257 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 FAM83CQ9BQN1 747 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 LGR4Q9BXB1 951 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 ARHGEF4Q9NR80 690 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 SUSD2Q9UGT4 822 aa4.46□□□□□ -1.7
VCL-203ENST00000461383 SF3B6Q9Y3B4 125 aaKnown RBP4.46□□□□□ -1.7
VCL-203ENST00000461383 MRPS23Q9Y3D9 190 aaKnown RBP4.46□□□□□ -1.7
VCL-203ENST00000461383 OAS3Q9Y6K5 1087 aaKnown RBP4.46□□□□□ -1.7
VCL-203ENST00000461383 GNAT3A8MTJ3 354 aa4.45□□□□□ -1.7
VCL-203ENST00000461383 MEIS1O00470 390 aa4.45□□□□□ -1.7
VCL-203ENST00000461383 LRRN2O75325 713 aa4.45□□□□□ -1.7
VCL-203ENST00000461383 KCNH1O95259 989 aa4.45□□□□□ -1.7
VCL-203ENST00000461383 IRAK1P51617 712 aa4.45□□□□□ -1.7
VCL-203ENST00000461383 ZNF445P59923 1031 aa4.45□□□□□ -1.7
VCL-203ENST00000461383 SUMO1P63165 101 aaKnown RBP4.45□□□□□ -1.7
VCL-203ENST00000461383 CPSF6Q16630 551 aaKnown RBP eCLIP4.45□□□□□ -1.7
VCL-203ENST00000461383 YOD1Q5VVQ6 348 aaPredicted RBP4.45□□□□□ -1.7
VCL-203ENST00000461383 FOXB2Q5VYV0 432 aa4.45□□□□□ -1.7
VCL-203ENST00000461383 CWF19L1Q69YN2 538 aaKnown RBP4.45□□□□□ -1.7
VCL-203ENST00000461383 DHX37Q8IY37 1157 aaKnown RBP4.45□□□□□ -1.7
VCL-203ENST00000461383 NIM1KQ8IY84 436 aa4.45□□□□□ -1.7
VCL-203ENST00000461383 FIBCD1Q8N539 461 aa4.45□□□□□ -1.7
VCL-203ENST00000461383 MFSD3Q96ES6 412 aa4.45□□□□□ -1.7
VCL-203ENST00000461383 RCC1LQ96I51 464 aaKnown RBP4.45□□□□□ -1.7
VCL-203ENST00000461383 EXOC2Q96KP1 924 aa4.45□□□□□ -1.7
VCL-203ENST00000461383 ZDHHC15Q96MV8 337 aa4.45□□□□□ -1.7
VCL-203ENST00000461383 DUSP23Q9BVJ7 150 aa4.45□□□□□ -1.7
VCL-203ENST00000461383 PRDM14Q9GZV8 571 aa4.45□□□□□ -1.7
VCL-203ENST00000461383 PCDH12Q9NPG4 1184 aa4.45□□□□□ -1.7
VCL-203ENST00000461383 GFOD1Q9NXC2 390 aa4.45□□□□□ -1.7
VCL-203ENST00000461383 CGGBP1Q9UFW8 167 aaPredicted RBP4.45□□□□□ -1.7
VCL-203ENST00000461383 GTF2IRD1Q9UHL9 959 aa4.45□□□□□ -1.7
VCL-203ENST00000461383 DIS3Q9Y2L1 958 aaKnown RBP4.45□□□□□ -1.7
VCL-203ENST00000461383 FHOD1Q9Y613 1164 aa4.45□□□□□ -1.7
VCL-203ENST00000461383 A0A087WZG4 1122 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 HMX2A2RU54 273 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 IRS4O14654 1257 aaPredicted RBP4.44□□□□□ -1.7
VCL-203ENST00000461383 PLD2O14939 933 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 SHOXO15266 292 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 ADAMTS4O75173 837 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 LEFTY1O75610 366 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 EOMESO95936 686 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 SNRPB2P08579 225 aaKnown RBP4.44□□□□□ -1.7
VCL-203ENST00000461383 FGFR1P11362 822 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 PABPC1P11940 636 aaKnown RBP4.44□□□□□ -1.7
VCL-203ENST00000461383 MYCLP1P12525 358 aaPredicted RBP4.44□□□□□ -1.7
VCL-203ENST00000461383 TXKP42681 527 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 KIR3DL1P43629 444 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 MASP1P48740 699 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 AMPD2Q01433 879 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 PABPC4Q13310 644 aaKnown RBP eCLIP4.44□□□□□ -1.7
VCL-203ENST00000461383 CYP27C1Q4G0S4 372 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 DALRD3Q5D0E6 543 aaKnown RBP4.44□□□□□ -1.7
VCL-203ENST00000461383 TRIM59Q8IWR1 403 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 SYTL5Q8TDW5 730 aaPredicted RBP4.44□□□□□ -1.7
VCL-203ENST00000461383 BTN2A2Q8WVV5 523 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 NINJ1Q92982 152 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 VWCEQ96DN2 955 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 IER2Q9BTL4 223 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 BRINP2Q9C0B6 783 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 NCOA5Q9HCD5 579 aaKnown RBP4.44□□□□□ -1.7
VCL-203ENST00000461383 C1GALT1Q9NS00 363 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 CHST7Q9NS84 486 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 SFMBT1Q9UHJ3 866 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 EMC9Q9Y3B6 208 aa4.44□□□□□ -1.7
VCL-203ENST00000461383 KRTAP4-8A0A0G2JLE6 195 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 FAM155AB1AL88 458 aaPredicted RBP4.43□□□□□ -1.7
VCL-203ENST00000461383 TBX1O43435 398 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 SIGLEC6O43699 453 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 RAPGEF3O95398 923 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 TAL1P17542 331 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms