RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 USP6NLQ92738 828 aa28.14■■■□□ 2.1
C9orf3-207ENST00000445181 KIFC2Q96AC6 838 aa28.14■■■□□ 2.1
C9orf3-207ENST00000445181 CTDP1Q9Y5B0 961 aaPredicted RBP28.14■■■□□ 2.1
C9orf3-207ENST00000445181 TAF6LQ9Y6J9 622 aa28.14■■■□□ 2.1
C9orf3-207ENST00000445181 TMEM232C9JQI7 657 aa28.13■■■□□ 2.09
C9orf3-207ENST00000445181 CCDC96Q2M329 555 aa28.13■■■□□ 2.09
C9orf3-207ENST00000445181 RCSD1Q6JBY9 416 aa28.13■■■□□ 2.09
C9orf3-207ENST00000445181 SPATC1LQ9H0A9 340 aa28.13■■■□□ 2.09
C9orf3-207ENST00000445181 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.13■■■□□ 2.093e-15■■■■■ 42.5
C9orf3-207ENST00000445181 TNKSO95271 1327 aa28.13■■■□□ 2.09
C9orf3-207ENST00000445181 MKI67P46013 3256 aaKnown RBP28.12■■■□□ 2.09
C9orf3-207ENST00000445181 VWA5AO00534 786 aa28.12■■■□□ 2.09
C9orf3-207ENST00000445181 SLC27A2O14975 620 aa28.12■■■□□ 2.09
C9orf3-207ENST00000445181 RGS2P41220 211 aa28.12■■■□□ 2.09
C9orf3-207ENST00000445181 KCTD1Q719H9 257 aa28.12■■■□□ 2.09
C9orf3-207ENST00000445181 DCAF4Q8WV16 495 aa28.12■■■□□ 2.09
C9orf3-207ENST00000445181 KAT14Q9H8E8 782 aa28.12■■■□□ 2.09
C9orf3-207ENST00000445181 PARP14Q460N5 1801 aa28.12■■■□□ 2.09
C9orf3-207ENST00000445181 STAT2P52630 851 aa28.11■■■□□ 2.09
C9orf3-207ENST00000445181 RNF20Q5VTR2 975 aa28.11■■■□□ 2.09
C9orf3-207ENST00000445181 CREB3L3Q68CJ9 461 aa28.11■■■□□ 2.09
C9orf3-207ENST00000445181 CYB5R4Q7L1T6 521 aa28.11■■■□□ 2.09
C9orf3-207ENST00000445181 UBE2Q1Q7Z7E8 422 aa28.11■■■□□ 2.09
C9orf3-207ENST00000445181 TRMT44Q8IYL2 757 aaKnown RBP28.11■■■□□ 2.09
C9orf3-207ENST00000445181 CHURC1Q8WUH1 139 aa28.11■■■□□ 2.09
C9orf3-207ENST00000445181 HMX1Q9NP08 348 aaPredicted RBP28.11■■■□□ 2.09
C9orf3-207ENST00000445181 ADAMTS5Q9UNA0 930 aa28.11■■■□□ 2.09
C9orf3-207ENST00000445181 A0A0G2JMZ2 1700 aa28.11■■■□□ 2.09
C9orf3-207ENST00000445181 RPTORQ8N122 1335 aa28.11■■■□□ 2.09
C9orf3-207ENST00000445181 ZBED4O75132 1171 aa28.1■■■□□ 2.09
C9orf3-207ENST00000445181 FARP2O94887 1054 aaPredicted RBP28.1■■■□□ 2.09
C9orf3-207ENST00000445181 CAPN2P17655 700 aa28.1■■■□□ 2.09
C9orf3-207ENST00000445181 TMEM132BQ14DG7 1078 aa28.1■■■□□ 2.09
C9orf3-207ENST00000445181 NECTIN1Q15223 517 aa28.1■■■□□ 2.09
C9orf3-207ENST00000445181 STOX1Q6ZVD7 989 aa28.1■■■□□ 2.09
C9orf3-207ENST00000445181 RASGRP2Q7LDG7 609 aa28.1■■■□□ 2.09
C9orf3-207ENST00000445181 ENAHQ8N8S7 591 aaPredicted RBP28.1■■■□□ 2.09
C9orf3-207ENST00000445181 MOV10L1Q9BXT6 1211 aaKnown RBP28.1■■■□□ 2.09
C9orf3-207ENST00000445181 ZKSCAN1P17029 563 aaPredicted RBP28.09■■■□□ 2.09
C9orf3-207ENST00000445181 PTPREP23469 700 aa28.09■■■□□ 2.09
C9orf3-207ENST00000445181 MAP2K5Q13163 448 aa28.09■■■□□ 2.09
C9orf3-207ENST00000445181 FAM160B2Q86V87 743 aa28.09■■■□□ 2.09
C9orf3-207ENST00000445181 CRISPLD2Q9H0B8 497 aa28.09■■■□□ 2.09
C9orf3-207ENST00000445181 IVNS1ABPQ9Y6Y0 642 aa28.09■■■□□ 2.09
C9orf3-207ENST00000445181 ERICH2A1L162 156 aa28.08■■■□□ 2.09
C9orf3-207ENST00000445181 SLC15A5A6NIM6 579 aa28.08■■■□□ 2.09
C9orf3-207ENST00000445181 SART3Q15020 963 aaKnown RBP28.08■■■□□ 2.09
C9orf3-207ENST00000445181 CCL14Q16627 93 aa28.08■■■□□ 2.09
C9orf3-207ENST00000445181 IFIT1BQ5T764 474 aaKnown RBP28.08■■■□□ 2.09
C9orf3-207ENST00000445181 NCAPG2Q86XI2 1143 aa28.08■■■□□ 2.09
C9orf3-207ENST00000445181 PNMA1Q8ND90 353 aa28.08■■■□□ 2.09
C9orf3-207ENST00000445181 APBA2Q99767 749 aa28.08■■■□□ 2.09
C9orf3-207ENST00000445181 COL11A1P12107 1806 aaPredicted RBP28.07■■■□□ 2.08
C9orf3-207ENST00000445181 REC8O95072 547 aa28.07■■■□□ 2.08
C9orf3-207ENST00000445181 PRKAR2AP13861 404 aaKnown RBP28.07■■■□□ 2.08
C9orf3-207ENST00000445181 ERCC3P19447 782 aa28.07■■■□□ 2.08
C9orf3-207ENST00000445181 STAT3P40763 770 aa28.07■■■□□ 2.08
C9orf3-207ENST00000445181 MAP3K21Q5TCX8 1036 aa28.07■■■□□ 2.08
C9orf3-207ENST00000445181 ANKS1AQ92625 1134 aa28.07■■■□□ 2.08
C9orf3-207ENST00000445181 DPF3Q92784 378 aa28.07■■■□□ 2.08
C9orf3-207ENST00000445181 FRMPD2Q68DX3 1309 aaPredicted RBP28.07■■■□□ 2.08
C9orf3-207ENST00000445181 IFIT3O14879 490 aaKnown RBP28.06■■■□□ 2.08
C9orf3-207ENST00000445181 PDHBP11177 359 aa28.06■■■□□ 2.08
C9orf3-207ENST00000445181 SLC4A3P48751 1232 aa28.06■■■□□ 2.08
C9orf3-207ENST00000445181 CHST3Q7LGC8 479 aa28.06■■■□□ 2.08
C9orf3-207ENST00000445181 SHCBP1Q8NEM2 672 aa28.06■■■□□ 2.08
C9orf3-207ENST00000445181 MROH8Q9H579 483 aa28.06■■■□□ 2.08
C9orf3-207ENST00000445181 GPCPD1Q9NPB8 672 aa28.06■■■□□ 2.08
C9orf3-207ENST00000445181 PLA2G6O60733 806 aa28.05■■■□□ 2.08
C9orf3-207ENST00000445181 SLC25A27O95847 323 aa28.05■■■□□ 2.08
C9orf3-207ENST00000445181 CPXCR1Q8N123 301 aa28.05■■■□□ 2.08
C9orf3-207ENST00000445181 REPS2Q8NFH8 660 aa28.05■■■□□ 2.08
C9orf3-207ENST00000445181 HTATIP2Q9BUP3 242 aa28.05■■■□□ 2.08
C9orf3-207ENST00000445181 SLC38A10Q9HBR0 1119 aa28.05■■■□□ 2.08
C9orf3-207ENST00000445181 ZNF214Q9UL59 606 aaPredicted RBP28.05■■■□□ 2.08
C9orf3-207ENST00000445181 FDX1P10109 184 aa28.04■■■□□ 2.08
C9orf3-207ENST00000445181 CACNB2Q08289 660 aaPredicted RBP28.04■■■□□ 2.08
C9orf3-207ENST00000445181 GRB14Q14449 540 aa28.04■■■□□ 2.08
C9orf3-207ENST00000445181 SNRNP48Q6IEG0 339 aaKnown RBP28.04■■■□□ 2.08
C9orf3-207ENST00000445181 MB21D2Q8IYB1 491 aaPredicted RBP28.04■■■□□ 2.08
C9orf3-207ENST00000445181 TEX13BQ9BXU2 312 aa28.04■■■□□ 2.08
C9orf3-207ENST00000445181 COPB2P35606 906 aa28.03■■■□□ 2.08
C9orf3-207ENST00000445181 SLC16A2P36021 539 aa28.03■■■□□ 2.08
C9orf3-207ENST00000445181 SEC23AQ15436 765 aa28.03■■■□□ 2.08
C9orf3-207ENST00000445181 TTBK2Q6IQ55 1244 aa28.03■■■□□ 2.08
C9orf3-207ENST00000445181 RIOX2Q8IUF8 465 aa28.03■■■□□ 2.08
C9orf3-207ENST00000445181 RAVER2Q9HCJ3 691 aaKnown RBP28.03■■■□□ 2.08
C9orf3-207ENST00000445181 PRR12Q9ULL5 1215 aa28.03■■■□□ 2.08
C9orf3-207ENST00000445181 SNHG28P0DPA3 235 aa28.02■■■□□ 2.08
C9orf3-207ENST00000445181 MCM5P33992 734 aa28.02■■■□□ 2.08
C9orf3-207ENST00000445181 ZNF543Q08ER8 600 aa28.02■■■□□ 2.08
C9orf3-207ENST00000445181 WTAPQ15007 396 aa28.02■■■□□ 2.08
C9orf3-207ENST00000445181 TMEM67Q5HYA8 995 aa28.02■■■□□ 2.08
C9orf3-207ENST00000445181 H0YGN5 161 aa28.01■■■□□ 2.07
C9orf3-207ENST00000445181 PRC1O43663 620 aa28.01■■■□□ 2.07
C9orf3-207ENST00000445181 STRNO43815 780 aa28.01■■■□□ 2.07
C9orf3-207ENST00000445181 HOXC6P09630 235 aa28.01■■■□□ 2.07
C9orf3-207ENST00000445181 GOLGA8HP0CJ92 632 aa28.01■■■□□ 2.07
C9orf3-207ENST00000445181 ANTXR2P58335 489 aa28.01■■■□□ 2.07
C9orf3-207ENST00000445181 GPATCH4Q5T3I0 446 aaKnown RBP28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms