RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 USP17L2Q6R6M4 530 aa15.86■□□□□ 0.13
HOXC4-202ENST00000430889 APTXQ7Z2E3 356 aaKnown RBP15.86■□□□□ 0.13
HOXC4-202ENST00000430889 HEATR3Q7Z4Q2 680 aa15.86■□□□□ 0.13
HOXC4-202ENST00000430889 IQUBQ8NA54 791 aa15.86■□□□□ 0.13
HOXC4-202ENST00000430889 ZC3H12CQ9C0D7 883 aaKnown RBP15.86■□□□□ 0.13
HOXC4-202ENST00000430889 TMEM60Q9H2L4 133 aa15.86■□□□□ 0.13
HOXC4-202ENST00000430889 MTMR4Q9NYA4 1195 aa15.86■□□□□ 0.13
HOXC4-202ENST00000430889 ESYT2A0FGR8 921 aa15.85■□□□□ 0.13
HOXC4-202ENST00000430889 PPP1R3GB7ZBB8 358 aa15.85■□□□□ 0.13
HOXC4-202ENST00000430889 SERPINC1P01008 464 aa15.85■□□□□ 0.13
HOXC4-202ENST00000430889 PDHBP11177 359 aa15.85■□□□□ 0.13
HOXC4-202ENST00000430889 PRPHP41219 470 aa15.85■□□□□ 0.13
HOXC4-202ENST00000430889 AFMP43652 599 aa15.85■□□□□ 0.13
HOXC4-202ENST00000430889 APOBEC3HQ6NTF7 200 aaKnown RBP15.85■□□□□ 0.13
HOXC4-202ENST00000430889 DPP8Q6V1X1 898 aaPredicted RBP15.85■□□□□ 0.13
HOXC4-202ENST00000430889 C16orf45Q96MC5 204 aaPredicted RBP15.85■□□□□ 0.13
HOXC4-202ENST00000430889 MXD3Q9BW11 206 aa15.85■□□□□ 0.13
HOXC4-202ENST00000430889 CPVLQ9H3G5 476 aa15.85■□□□□ 0.13
HOXC4-202ENST00000430889 TTF2Q9UNY4 1162 aaKnown RBP15.85■□□□□ 0.13
HOXC4-202ENST00000430889 PSME4Q14997 1843 aa15.84■□□□□ 0.13
HOXC4-202ENST00000430889 CCDC194A0A1B0GVG4 234 aa15.84■□□□□ 0.13
HOXC4-202ENST00000430889 USP17L5A8MUK1 530 aa15.84■□□□□ 0.13
HOXC4-202ENST00000430889 RIOK3O14730 519 aaKnown RBP15.84■□□□□ 0.13
HOXC4-202ENST00000430889 GTPBP6O43824 516 aaPredicted RBP15.84■□□□□ 0.13
HOXC4-202ENST00000430889 TNNT1P13805 278 aa15.84■□□□□ 0.13
HOXC4-202ENST00000430889 AKR1B1P15121 316 aa15.84■□□□□ 0.13
HOXC4-202ENST00000430889 SFPQP23246 707 aaKnown RBP eCLIP15.84■□□□□ 0.13
HOXC4-202ENST00000430889 E4F1Q66K89 784 aaPredicted RBP15.84■□□□□ 0.13
HOXC4-202ENST00000430889 TRMT44Q8IYL2 757 aaKnown RBP15.84■□□□□ 0.13
HOXC4-202ENST00000430889 LAD1O00515 517 aa15.83■□□□□ 0.13
HOXC4-202ENST00000430889 APBA3O96018 575 aa15.83■□□□□ 0.13
HOXC4-202ENST00000430889 SHMT1P34896 483 aa15.83■□□□□ 0.13
HOXC4-202ENST00000430889 FKBP1AP62942 108 aaKnown RBP15.83■□□□□ 0.13
HOXC4-202ENST00000430889 TPD52L1Q16890 204 aaPredicted RBP15.83■□□□□ 0.13
HOXC4-202ENST00000430889 DOK7Q18PE1 504 aa15.83■□□□□ 0.13
HOXC4-202ENST00000430889 INF2Q27J81 1249 aa15.83■□□□□ 0.13
HOXC4-202ENST00000430889 CFAP100Q494V2 611 aa15.83■□□□□ 0.13
HOXC4-202ENST00000430889 NAALADL2Q58DX5 795 aa15.83■□□□□ 0.13
HOXC4-202ENST00000430889 CDKAL1Q5VV42 579 aa15.83■□□□□ 0.13
HOXC4-202ENST00000430889 SPATA1Q5VX52 437 aa15.83■□□□□ 0.13
HOXC4-202ENST00000430889 CDC42EP5Q6NZY7 148 aa15.83■□□□□ 0.13
HOXC4-202ENST00000430889 CCDC12Q8WUD4 166 aaPredicted RBP15.83■□□□□ 0.13
HOXC4-202ENST00000430889 MRIQ9BWK5 157 aa15.83■□□□□ 0.13
HOXC4-202ENST00000430889 CCSER1Q9C0I3 900 aa15.83■□□□□ 0.13
HOXC4-202ENST00000430889 SWAP70Q9UH65 585 aa15.83■□□□□ 0.13
HOXC4-202ENST00000430889 PARP3Q9Y6F1 533 aa15.83■□□□□ 0.13
HOXC4-202ENST00000430889 ARFGEF1Q9Y6D6 1849 aa15.83■□□□□ 0.12
HOXC4-202ENST00000430889 A0A1B0GTH6 734 aa15.83■□□□□ 0.12
HOXC4-202ENST00000430889 PSDA5PKW4 1024 aaPredicted RBP15.83■□□□□ 0.12
HOXC4-202ENST00000430889 hCG_1984214I3L0E3 225 aa15.83■□□□□ 0.12
HOXC4-202ENST00000430889 CTIFO43310 598 aaKnown RBP15.83■□□□□ 0.12
HOXC4-202ENST00000430889 ASPRV1Q53RT3 343 aa15.83■□□□□ 0.12
HOXC4-202ENST00000430889 KRT25Q7Z3Z0 450 aa15.83■□□□□ 0.12
HOXC4-202ENST00000430889 TMEM139Q8IV31 216 aa15.83■□□□□ 0.12
HOXC4-202ENST00000430889 ZNF713Q8N859 430 aaPredicted RBP15.83■□□□□ 0.12
HOXC4-202ENST00000430889 RRP36Q96EU6 259 aaKnown RBP15.83■□□□□ 0.12
HOXC4-202ENST00000430889 SAMSN1Q9NSI8 373 aaKnown RBP15.83■□□□□ 0.12
HOXC4-202ENST00000430889 USP40Q9NVE5 1235 aa15.83■□□□□ 0.12
HOXC4-202ENST00000430889 F8W031 263 aaPredicted RBP15.82■□□□□ 0.12
HOXC4-202ENST00000430889 NAPAP54920 295 aa15.82■□□□□ 0.12
HOXC4-202ENST00000430889 PICALMQ13492 652 aa15.82■□□□□ 0.12
HOXC4-202ENST00000430889 NR1I3Q14994 352 aa15.82■□□□□ 0.12
HOXC4-202ENST00000430889 STYK1Q6J9G0 422 aa15.82■□□□□ 0.12
HOXC4-202ENST00000430889 ZDHHC15Q96MV8 337 aa15.82■□□□□ 0.12
HOXC4-202ENST00000430889 PIGSQ96S52 555 aa15.82■□□□□ 0.12
HOXC4-202ENST00000430889 EHD4Q9H223 541 aa15.82■□□□□ 0.12
HOXC4-202ENST00000430889 DISC1Q9NRI5 854 aa15.82■□□□□ 0.12
HOXC4-202ENST00000430889 SERPINB13Q9UIV8 391 aa15.82■□□□□ 0.12
HOXC4-202ENST00000430889 MTMR7Q9Y216 660 aa15.82■□□□□ 0.12
HOXC4-202ENST00000430889 SYNRGQ9UMZ2 1314 aa15.81■□□□□ 0.12
HOXC4-202ENST00000430889 ORC2Q13416 577 aaPredicted RBP15.81■□□□□ 0.12
HOXC4-202ENST00000430889 ZNF772Q68DY9 489 aaPredicted RBP15.81■□□□□ 0.12
HOXC4-202ENST00000430889 DTHD1Q6ZMT9 781 aa15.81■□□□□ 0.12
HOXC4-202ENST00000430889 PODNQ7Z5L7 613 aa15.81■□□□□ 0.12
HOXC4-202ENST00000430889 CCDC112Q8NEF3 446 aa15.81■□□□□ 0.12
HOXC4-202ENST00000430889 LRRC15Q8TF66 581 aa15.81■□□□□ 0.12
HOXC4-202ENST00000430889 TEKT1Q969V4 418 aa15.81■□□□□ 0.12
HOXC4-202ENST00000430889 SMCO2A6NFE2 343 aa15.8■□□□□ 0.12
HOXC4-202ENST00000430889 RRP9O43818 475 aaKnown RBP15.8■□□□□ 0.12
HOXC4-202ENST00000430889 EDIL3O43854 480 aa15.8■□□□□ 0.12
HOXC4-202ENST00000430889 GNA11P29992 359 aa15.8■□□□□ 0.12
HOXC4-202ENST00000430889 PBX1P40424 430 aa15.8■□□□□ 0.12
HOXC4-202ENST00000430889 CRKP46108 304 aa15.8■□□□□ 0.12
HOXC4-202ENST00000430889 SCNN1DP51172 638 aa15.8■□□□□ 0.12
HOXC4-202ENST00000430889 NONOQ15233 471 aaKnown RBP eCLIP15.8■□□□□ 0.12
HOXC4-202ENST00000430889 STAMQ92783 540 aa15.8■□□□□ 0.12
HOXC4-202ENST00000430889 C6orf50Q9HD87 102 aa15.8■□□□□ 0.12
HOXC4-202ENST00000430889 PAXBP1Q9Y5B6 917 aa15.8■□□□□ 0.12
HOXC4-202ENST00000430889 TTLL1O95922 423 aa15.79■□□□□ 0.12
HOXC4-202ENST00000430889 HDLBPQ00341 1268 aaKnown RBP15.79■□□□□ 0.12
HOXC4-202ENST00000430889 ZNF543Q08ER8 600 aa15.79■□□□□ 0.12
HOXC4-202ENST00000430889 NFIAQ12857 509 aa15.79■□□□□ 0.12
HOXC4-202ENST00000430889 KARSQ15046 597 aaKnown RBP15.79■□□□□ 0.12
HOXC4-202ENST00000430889 DACT2Q5SW24 774 aa15.79■□□□□ 0.12
HOXC4-202ENST00000430889 CEP135Q66GS9 1140 aa15.79■□□□□ 0.12
HOXC4-202ENST00000430889 SMYD4Q8IYR2 804 aaPredicted RBP15.79■□□□□ 0.12
HOXC4-202ENST00000430889 ZNF710Q8N1W2 664 aa15.79■□□□□ 0.12
HOXC4-202ENST00000430889 MTMR8Q96EF0 704 aa15.79■□□□□ 0.12
HOXC4-202ENST00000430889 PPP1R13BQ96KQ4 1090 aa15.79■□□□□ 0.12
HOXC4-202ENST00000430889 UBA5Q9GZZ9 404 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms