RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 NT5C2P49902 561 aa15.58■□□□□ 0.08
PRPF39-202ENST00000424478 HEATR3Q7Z4Q2 680 aa15.58■□□□□ 0.08
PRPF39-202ENST00000424478 ALG1Q9BT22 464 aa15.58■□□□□ 0.08
PRPF39-202ENST00000424478 TMOD4Q9NZQ9 345 aa15.58■□□□□ 0.08
PRPF39-202ENST00000424478 SYT1P21579 422 aa15.57■□□□□ 0.08
PRPF39-202ENST00000424478 STAT2P52630 851 aa15.57■□□□□ 0.08
PRPF39-202ENST00000424478 CPXCR1Q8N123 301 aa15.57■□□□□ 0.08
PRPF39-202ENST00000424478 NID2Q14112 1375 aa15.57■□□□□ 0.08
PRPF39-202ENST00000424478 TMEM88BA6NKF7 163 aa15.57■□□□□ 0.08
PRPF39-202ENST00000424478 PPIL2Q13356 520 aa15.57■□□□□ 0.08
PRPF39-202ENST00000424478 LARP1BQ659C4 914 aaKnown RBP15.57■□□□□ 0.08
PRPF39-202ENST00000424478 CPLX2Q6PUV4 134 aaKnown RBP15.57■□□□□ 0.08
PRPF39-202ENST00000424478 ATG4CQ96DT6 458 aa15.57■□□□□ 0.08
PRPF39-202ENST00000424478 INTS4Q96HW7 963 aaKnown RBP15.57■□□□□ 0.08
PRPF39-202ENST00000424478 CYP2C8P10632 490 aa15.57■□□□□ 0.08
PRPF39-202ENST00000424478 MOGSQ13724 837 aa15.57■□□□□ 0.08
PRPF39-202ENST00000424478 SPRYD7Q5W111 196 aa15.57■□□□□ 0.08
PRPF39-202ENST00000424478 RASAL3Q86YV0 1011 aa15.57■□□□□ 0.08
PRPF39-202ENST00000424478 SYDE2Q5VT97 1194 aa15.56■□□□□ 0.08
PRPF39-202ENST00000424478 FAM173BQ6P4H8 233 aa15.56■□□□□ 0.08
PRPF39-202ENST00000424478 POTEEQ6S8J3 1075 aa15.56■□□□□ 0.08
PRPF39-202ENST00000424478 TRIM22Q8IYM9 498 aa15.56■□□□□ 0.08
PRPF39-202ENST00000424478 CCL15-CCL14A0A0B4J2E2 113 aa15.56■□□□□ 0.08
PRPF39-202ENST00000424478 A0A0G2JLL6 359 aaPredicted RBP15.56■□□□□ 0.08
PRPF39-202ENST00000424478 FKBP1BP68106 108 aa15.56■□□□□ 0.08
PRPF39-202ENST00000424478 AKAP17AQ02040 695 aaKnown RBP15.56■□□□□ 0.08
PRPF39-202ENST00000424478 CDC37Q16543 378 aaPredicted RBP15.56■□□□□ 0.08
PRPF39-202ENST00000424478 CCL15Q16663 113 aa15.56■□□□□ 0.08
PRPF39-202ENST00000424478 QRICH1Q2TAL8 776 aa15.56■□□□□ 0.08
PRPF39-202ENST00000424478 PPP4R3BQ5MIZ7 849 aa15.56■□□□□ 0.08
PRPF39-202ENST00000424478 GPATCH4Q5T3I0 446 aaKnown RBP15.56■□□□□ 0.08
PRPF39-202ENST00000424478 WWC2Q6AWC2 1192 aa15.56■□□□□ 0.08
PRPF39-202ENST00000424478 RGMBQ6NW40 437 aa15.56■□□□□ 0.08
PRPF39-202ENST00000424478 PRRT2Q7Z6L0 340 aaPredicted RBP15.56■□□□□ 0.08
PRPF39-202ENST00000424478 BRI3BPQ8WY22 251 aa15.56■□□□□ 0.08
PRPF39-202ENST00000424478 MS4A4AQ96JQ5 239 aa15.56■□□□□ 0.08
PRPF39-202ENST00000424478 BRCA2P51587 3418 aa15.56■□□□□ 0.08
PRPF39-202ENST00000424478 PTPN18Q99952 460 aa15.55■□□□□ 0.08
PRPF39-202ENST00000424478 HOMER2Q9NSB8 354 aa15.55■□□□□ 0.08
PRPF39-202ENST00000424478 ZDHHC9Q9Y397 364 aa15.55■□□□□ 0.08
PRPF39-202ENST00000424478 WDR46O15213 610 aaKnown RBP15.55■□□□□ 0.08
PRPF39-202ENST00000424478 USP14P54578 494 aa15.55■□□□□ 0.08
PRPF39-202ENST00000424478 NOM1Q5C9Z4 860 aaKnown RBP15.55■□□□□ 0.08
PRPF39-202ENST00000424478 LLPHQ9BRT6 129 aaKnown RBP15.55■□□□□ 0.08
PRPF39-202ENST00000424478 R3HDMLQ9H3Y0 253 aa15.55■□□□□ 0.08
PRPF39-202ENST00000424478 RIOX1Q9H6W3 641 aa15.55■□□□□ 0.08
PRPF39-202ENST00000424478 GINM1Q9NU53 330 aa15.55■□□□□ 0.08
PRPF39-202ENST00000424478 TLL2Q9Y6L7 1015 aa15.55■□□□□ 0.08
PRPF39-202ENST00000424478 AOC2O75106 756 aa15.55■□□□□ 0.08
PRPF39-202ENST00000424478 CDKL5O76039 1030 aa15.55■□□□□ 0.08
PRPF39-202ENST00000424478 RCAN1P53805 252 aa15.55■□□□□ 0.08
PRPF39-202ENST00000424478 MCTP1Q6DN14 999 aa15.55■□□□□ 0.08
PRPF39-202ENST00000424478 FAM43AQ8N2R8 423 aa15.55■□□□□ 0.08
PRPF39-202ENST00000424478 AGBL1Q96MI9 1066 aa15.55■□□□□ 0.08
PRPF39-202ENST00000424478 RAVER2Q9HCJ3 691 aaKnown RBP15.55■□□□□ 0.08
PRPF39-202ENST00000424478 KCNH4Q9UQ05 1017 aa15.55■□□□□ 0.08
PRPF39-202ENST00000424478 C19orf81C9J6K1 198 aa15.54■□□□□ 0.08
PRPF39-202ENST00000424478 RASGRP4Q8TDF6 673 aa15.54■□□□□ 0.08
PRPF39-202ENST00000424478 LPAR1Q92633 364 aa15.54■□□□□ 0.08
PRPF39-202ENST00000424478 RRP36Q96EU6 259 aaKnown RBP15.54■□□□□ 0.08
PRPF39-202ENST00000424478 MAP3K14Q99558 947 aa15.54■□□□□ 0.08
PRPF39-202ENST00000424478 RNF26Q9BY78 433 aaPredicted RBP15.54■□□□□ 0.08
PRPF39-202ENST00000424478 COL11A1P12107 1806 aaPredicted RBP15.54■□□□□ 0.08
PRPF39-202ENST00000424478 PRPF3O43395 683 aaKnown RBP15.54■□□□□ 0.08
PRPF39-202ENST00000424478 DDIT3P35638 169 aa15.54■□□□□ 0.08
PRPF39-202ENST00000424478 SNAPC2Q13487 334 aa15.54■□□□□ 0.08
PRPF39-202ENST00000424478 GPAT2Q6NUI2 795 aa15.54■□□□□ 0.08
PRPF39-202ENST00000424478 OXER1Q8TDS5 423 aa15.54■□□□□ 0.08
PRPF39-202ENST00000424478 C8orf76Q96K31 380 aa15.54■□□□□ 0.08
PRPF39-202ENST00000424478 P2RX7Q99572 595 aaKnown RBP15.54■□□□□ 0.08
PRPF39-202ENST00000424478 SLF1Q9BQI6 1058 aa15.54■□□□□ 0.08
PRPF39-202ENST00000424478 SPZ1Q9BXG8 430 aa15.54■□□□□ 0.08
PRPF39-202ENST00000424478 SCG2P13521 617 aa15.53■□□□□ 0.08
PRPF39-202ENST00000424478 GNAQP50148 359 aa15.53■□□□□ 0.08
PRPF39-202ENST00000424478 PAGR1Q9BTK6 254 aa15.53■□□□□ 0.08
PRPF39-202ENST00000424478 RLFQ13129 1914 aa15.53■□□□□ 0.08
PRPF39-202ENST00000424478 BTBD19C9JJ37 291 aa15.53■□□□□ 0.08
PRPF39-202ENST00000424478 DEXIO95424 95 aa15.53■□□□□ 0.08
PRPF39-202ENST00000424478 PLS1Q14651 629 aa15.53■□□□□ 0.08
PRPF39-202ENST00000424478 SEC63Q9UGP8 760 aaKnown RBP15.53■□□□□ 0.08
PRPF39-202ENST00000424478 H3BQV1 296 aa15.52■□□□□ 0.08
PRPF39-202ENST00000424478 PFKFB3Q16875 520 aaPredicted RBP15.52■□□□□ 0.08
PRPF39-202ENST00000424478 SH3D19Q5HYK7 790 aa15.52■□□□□ 0.08
PRPF39-202ENST00000424478 IFFO2Q5TF58 517 aa15.52■□□□□ 0.08
PRPF39-202ENST00000424478 KRT40Q6A162 431 aa15.52■□□□□ 0.08
PRPF39-202ENST00000424478 CATSPERGQ6ZRH7 1159 aa15.52■□□□□ 0.08
PRPF39-202ENST00000424478 ASCC2Q9H1I8 757 aaPredicted RBP15.52■□□□□ 0.08
PRPF39-202ENST00000424478 PARP14Q460N5 1801 aa15.52■□□□□ 0.08
PRPF39-202ENST00000424478 FAM155AB1AL88 458 aaPredicted RBP15.52■□□□□ 0.08
PRPF39-202ENST00000424478 CXCL11O14625 94 aa15.52■□□□□ 0.08
PRPF39-202ENST00000424478 STX6O43752 255 aa15.52■□□□□ 0.08
PRPF39-202ENST00000424478 HMGN5P82970 282 aaKnown RBP15.52■□□□□ 0.08
PRPF39-202ENST00000424478 PGBD1Q96JS3 809 aa15.52■□□□□ 0.08
PRPF39-202ENST00000424478 MTMR6Q9Y217 621 aa15.52■□□□□ 0.08
PRPF39-202ENST00000424478 FAM205CA6NFA0 338 aa15.52■□□□□ 0.07
PRPF39-202ENST00000424478 KIF28PB7ZC32 967 aa15.52■□□□□ 0.07
PRPF39-202ENST00000424478 FSTL1Q12841 308 aa15.52■□□□□ 0.07
PRPF39-202ENST00000424478 NR5A1Q13285 461 aa15.52■□□□□ 0.07
PRPF39-202ENST00000424478 TBC1D5Q92609 795 aa15.52■□□□□ 0.07
PRPF39-202ENST00000424478 C12orf42Q96LP6 360 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms