RNA–Protein interactions for RNA: ENST00000412827.6

PUDP-202, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 1,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-202ENST00000412827 LOC285556D6RIA3 1793 aa17.5■□□□□ 0.39
PUDP-202ENST00000412827 MYH6P13533 1939 aa17.5■□□□□ 0.39
PUDP-202ENST00000412827 AKAP17AQ02040 695 aaKnown RBP17.5■□□□□ 0.39
PUDP-202ENST00000412827 DCAF4Q8WV16 495 aa17.5■□□□□ 0.39
PUDP-202ENST00000412827 C8orf76Q96K31 380 aa17.5■□□□□ 0.39
PUDP-202ENST00000412827 AGTPBP1Q9UPW5 1226 aa17.5■□□□□ 0.39
PUDP-202ENST00000412827 SLC45A1Q9Y2W3 748 aa17.5■□□□□ 0.39
PUDP-202ENST00000412827 TESPA1A2RU30 521 aaPredicted RBP17.49■□□□□ 0.39
PUDP-202ENST00000412827 F5H6K3 240 aa17.49■□□□□ 0.39
PUDP-202ENST00000412827 PRPF3O43395 683 aaKnown RBP17.49■□□□□ 0.39
PUDP-202ENST00000412827 ALDH1A1P00352 501 aa17.49■□□□□ 0.39
PUDP-202ENST00000412827 VCAM1P19320 739 aa17.49■□□□□ 0.39
PUDP-202ENST00000412827 VEGFBP49765 207 aa17.49■□□□□ 0.39
PUDP-202ENST00000412827 HTRA3P83110 453 aa17.49■□□□□ 0.39
PUDP-202ENST00000412827 KIF23Q02241 960 aaPredicted RBP17.49■□□□□ 0.39
PUDP-202ENST00000412827 KLRC3Q07444 240 aa17.49■□□□□ 0.39
PUDP-202ENST00000412827 GRM4Q14833 912 aa17.49■□□□□ 0.39
PUDP-202ENST00000412827 SLFN13Q68D06 897 aa17.49■□□□□ 0.39
PUDP-202ENST00000412827 TMTC3Q6ZXV5 915 aa17.49■□□□□ 0.39
PUDP-202ENST00000412827 ANKRD23Q86SG2 305 aa17.49■□□□□ 0.39
PUDP-202ENST00000412827 NBPF11Q86T75 865 aa17.49■□□□□ 0.39
PUDP-202ENST00000412827 TMEM87AQ8NBN3 555 aa17.49■□□□□ 0.39
PUDP-202ENST00000412827 GMCL1Q96IK5 515 aa17.49■□□□□ 0.39
PUDP-202ENST00000412827 MS4A4AQ96JQ5 239 aa17.49■□□□□ 0.39
PUDP-202ENST00000412827 MYL10Q9BUA6 226 aa17.49■□□□□ 0.39
PUDP-202ENST00000412827 ISY1Q9ULR0 285 aaKnown RBP17.49■□□□□ 0.39
PUDP-202ENST00000412827 MYH4Q9Y623 1939 aa17.48■□□□□ 0.39
PUDP-202ENST00000412827 NDUFB10O96000 172 aa17.48■□□□□ 0.39
PUDP-202ENST00000412827 XBP1P17861 261 aa17.48■□□□□ 0.39
PUDP-202ENST00000412827 RXRAP19793 462 aa17.48■□□□□ 0.39
PUDP-202ENST00000412827 SLC1A4P43007 532 aa17.48■□□□□ 0.39
PUDP-202ENST00000412827 TRIM29Q14134 588 aa17.48■□□□□ 0.39
PUDP-202ENST00000412827 NBR1Q14596 966 aa17.48■□□□□ 0.39
PUDP-202ENST00000412827 CCDC96Q2M329 555 aa17.48■□□□□ 0.39
PUDP-202ENST00000412827 BRAPQ7Z569 592 aa17.48■□□□□ 0.39
PUDP-202ENST00000412827 SIAH1Q8IUQ4 282 aa17.48■□□□□ 0.39
PUDP-202ENST00000412827 BRI3BPQ8WY22 251 aa17.48■□□□□ 0.39
PUDP-202ENST00000412827 PARK7Q99497 189 aaKnown RBP17.48■□□□□ 0.39
PUDP-202ENST00000412827 ALG1Q9BT22 464 aa17.48■□□□□ 0.39
PUDP-202ENST00000412827 PTPRFP10586 1907 aa17.47■□□□□ 0.39
PUDP-202ENST00000412827 IRX3P78415 501 aaPredicted RBP17.47■□□□□ 0.39
PUDP-202ENST00000412827 FUT2Q10981 343 aa17.47■□□□□ 0.39
PUDP-202ENST00000412827 RESTQ13127 1097 aa17.47■□□□□ 0.39
PUDP-202ENST00000412827 GPATCH4Q5T3I0 446 aaKnown RBP17.47■□□□□ 0.39
PUDP-202ENST00000412827 RAB11FIP4Q86YS3 637 aa17.47■□□□□ 0.39
PUDP-202ENST00000412827 CCDC144CPQ8IYA2 1237 aa17.47■□□□□ 0.39
PUDP-202ENST00000412827 GTF3C2Q8WUA4 911 aaPredicted RBP17.47■□□□□ 0.39
PUDP-202ENST00000412827 SLC26A6Q9BXS9 759 aa17.47■□□□□ 0.39
PUDP-202ENST00000412827 TANGO6Q9C0B7 1094 aa17.47■□□□□ 0.39
PUDP-202ENST00000412827 EMILIN3Q9NT22 766 aa17.47■□□□□ 0.39
PUDP-202ENST00000412827 USP17L15C9J2P7 530 aa17.46■□□□□ 0.39
PUDP-202ENST00000412827 USP17L13C9JLJ4 530 aa17.46■□□□□ 0.39
PUDP-202ENST00000412827 USP17L11C9JVI0 530 aa17.46■□□□□ 0.39
PUDP-202ENST00000412827 USP17L18D6R9N7 530 aa17.46■□□□□ 0.39
PUDP-202ENST00000412827 USP17L22D6RA61 530 aa17.46■□□□□ 0.39
PUDP-202ENST00000412827 USP17L17D6RBQ6 530 aa17.46■□□□□ 0.39
PUDP-202ENST00000412827 USP17L19D6RCP7 530 aa17.46■□□□□ 0.39
PUDP-202ENST00000412827 USP17L20D6RJB6 530 aa17.46■□□□□ 0.39
PUDP-202ENST00000412827 AOC2O75106 756 aa17.46■□□□□ 0.39
PUDP-202ENST00000412827 BMP3P12645 472 aa17.46■□□□□ 0.39
PUDP-202ENST00000412827 OSBPP22059 807 aa17.46■□□□□ 0.39
PUDP-202ENST00000412827 KRT85P78386 507 aa17.46■□□□□ 0.39
PUDP-202ENST00000412827 USP17L24Q0WX57 530 aa17.46■□□□□ 0.39
PUDP-202ENST00000412827 ASPRV1Q53RT3 343 aa17.46■□□□□ 0.39
PUDP-202ENST00000412827 MCTP1Q6DN14 999 aa17.46■□□□□ 0.39
PUDP-202ENST00000412827 SPICE1Q8N0Z3 855 aa17.46■□□□□ 0.39
PUDP-202ENST00000412827 RPAP3Q9H6T3 665 aaPredicted RBP17.46■□□□□ 0.39
PUDP-202ENST00000412827 TCHHQ07283 1943 aa17.45■□□□□ 0.38
PUDP-202ENST00000412827 MYH15Q9Y2K3 1946 aa17.45■□□□□ 0.38
PUDP-202ENST00000412827 MYPNQ86TC9 1320 aa17.45■□□□□ 0.38
PUDP-202ENST00000412827 PALM3A6NDB9 673 aaPredicted RBP17.45■□□□□ 0.38
PUDP-202ENST00000412827 PARP1P09874 1014 aaKnown RBP17.45■□□□□ 0.38
PUDP-202ENST00000412827 TM4SF4P48230 202 aa17.45■□□□□ 0.38
PUDP-202ENST00000412827 IFNL1Q8IU54 200 aa17.45■□□□□ 0.38
PUDP-202ENST00000412827 BEGAINQ9BUH8 593 aa17.45■□□□□ 0.38
PUDP-202ENST00000412827 SCAND2PQ9GZW5 306 aaPredicted RBP17.45■□□□□ 0.38
PUDP-202ENST00000412827 CFAP45Q9UL16 551 aa17.45■□□□□ 0.38
PUDP-202ENST00000412827 MTMR7Q9Y216 660 aa17.45■□□□□ 0.38
PUDP-202ENST00000412827 PDHBP11177 359 aa17.44■□□□□ 0.38
PUDP-202ENST00000412827 HOXA7P31268 230 aaPredicted RBP17.44■□□□□ 0.38
PUDP-202ENST00000412827 MAP2K1Q02750 393 aaPredicted RBP17.44■□□□□ 0.38
PUDP-202ENST00000412827 IKQ13123 557 aaPredicted RBP17.44■□□□□ 0.38
PUDP-202ENST00000412827 SAFBQ15424 915 aaKnown RBP eCLIP17.44■□□□□ 0.38
PUDP-202ENST00000412827 FAM83BQ5T0W9 1011 aa17.44■□□□□ 0.38
PUDP-202ENST00000412827 FOXD4L5Q5VV16 416 aaPredicted RBP17.44■□□□□ 0.38
PUDP-202ENST00000412827 FAM160B2Q86V87 743 aa17.44■□□□□ 0.38
PUDP-202ENST00000412827 FOXD4L4Q8WXT5 416 aaPredicted RBP17.44■□□□□ 0.38
PUDP-202ENST00000412827 PHKBQ93100 1093 aa17.44■□□□□ 0.38
PUDP-202ENST00000412827 ZNF396Q96N95 335 aaPredicted RBP17.44■□□□□ 0.38
PUDP-202ENST00000412827 LMBRD1Q9NUN5 540 aa17.44■□□□□ 0.38
PUDP-202ENST00000412827 ELP1O95163 1332 aa17.44■□□□□ 0.38
PUDP-202ENST00000412827 CNTNAP5Q8WYK1 1306 aa17.44■□□□□ 0.38
PUDP-202ENST00000412827 BTBD19C9JJ37 291 aa17.43■□□□□ 0.38
PUDP-202ENST00000412827 PDHXO00330 501 aa17.43■□□□□ 0.38
PUDP-202ENST00000412827 FLOT1O75955 427 aa17.43■□□□□ 0.38
PUDP-202ENST00000412827 MBD3O95983 291 aa17.43■□□□□ 0.38
PUDP-202ENST00000412827 SNHG28P0DPA3 235 aa17.43■□□□□ 0.38
PUDP-202ENST00000412827 NCLP19338 710 aaKnown RBP17.43■□□□□ 0.38
PUDP-202ENST00000412827 STAT2P52630 851 aa17.43■□□□□ 0.38
PUDP-202ENST00000412827 MOGSQ13724 837 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms