RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 ZNF541Q9H0D2 1346 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 MYH3P11055 1940 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 A0A1B0GTH6 734 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 SEMA3EO15041 775 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 PHACTR2O75167 634 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 INHBEP58166 350 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 TBC1D8BQ0IIM8 1120 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 STK38Q15208 465 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 CWF19L2Q2TBE0 894 aaKnown RBP11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 CCDC40Q4G0X9 1142 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 ZNF569Q5MCW4 686 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 CEP85LQ5SZL2 805 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 NT5DC1Q5TFE4 455 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 CCNI2Q6ZMN8 369 aaPredicted RBP11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 KIAA1328Q86T90 577 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 TMTC1Q8IUR5 882 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 RTKN2Q8IZC4 609 aa11.94□□□□□ -0.5
NIF3L1-204ENST00000409357 SPEF2Q9C093 1822 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 LTBP1Q14766 1721 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 GOLGA6L7A0A1B0GV03 622 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 PTPDC1A2A3K4 754 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 TTC36A6NLP5 189 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 TMEM232C9JQI7 657 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 PSMD14O00487 310 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 PES1O00541 588 aaKnown RBP11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 IRS4O14654 1257 aaPredicted RBP11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 NEBLO76041 1014 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 DDNO94850 711 aaPredicted RBP11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 CTDNEP1O95476 244 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 RHOXF2BP0C7M4 288 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 GGCXP38435 758 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 PBX1P40424 430 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 TRAF1Q13077 416 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 BIRC2Q13490 618 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 SF3A1Q15459 793 aaKnown RBP11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 C6orf89Q6UWU4 347 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 KSR2Q6VAB6 950 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 TRAPPC11Q7Z392 1133 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 ZNF483Q8TF39 744 aaPredicted RBP11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 CELF1Q92879 486 aaKnown RBP11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 RHOXF2Q9BQY4 288 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 SPATS2LQ9NUQ6 558 aaKnown RBP11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 FANCLQ9NW38 375 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 ETAA1Q9NY74 926 aa11.93□□□□□ -0.5
NIF3L1-204ENST00000409357 A0A087WWV3 80 aa11.92□□□□□ -0.5
NIF3L1-204ENST00000409357 GOLGA6BA6NDN3 693 aa11.92□□□□□ -0.5
NIF3L1-204ENST00000409357 IRF6O14896 467 aa11.92□□□□□ -0.5
NIF3L1-204ENST00000409357 TOMM70O94826 608 aa11.92□□□□□ -0.5
NIF3L1-204ENST00000409357 PFKFB1P16118 471 aa11.92□□□□□ -0.5
NIF3L1-204ENST00000409357 ATP5JP18859 108 aa11.92□□□□□ -0.5
NIF3L1-204ENST00000409357 ERCC5P28715 1186 aaPredicted RBP11.92□□□□□ -0.5
NIF3L1-204ENST00000409357 IARSP41252 1262 aaKnown RBP11.92□□□□□ -0.5
NIF3L1-204ENST00000409357 NNTQ13423 1086 aa11.92□□□□□ -0.5
NIF3L1-204ENST00000409357 SNCBQ16143 134 aa11.92□□□□□ -0.5
NIF3L1-204ENST00000409357 PAPD7Q5XG87 772 aaKnown RBP11.92□□□□□ -0.5
NIF3L1-204ENST00000409357 WWC2Q6AWC2 1192 aa11.92□□□□□ -0.5
NIF3L1-204ENST00000409357 Q6ZUG5 572 aa11.92□□□□□ -0.5
NIF3L1-204ENST00000409357 DHX32Q7L7V1 743 aaKnown RBP11.92□□□□□ -0.5
NIF3L1-204ENST00000409357 ZBTB38Q8NAP3 1195 aaPredicted RBP11.92□□□□□ -0.5
NIF3L1-204ENST00000409357 AENQ8WTP8 325 aaKnown RBP11.92□□□□□ -0.5
NIF3L1-204ENST00000409357 HOOK1Q9UJC3 728 aaKnown RBP11.92□□□□□ -0.5
NIF3L1-204ENST00000409357 FAM184BQ9ULE4 1060 aa11.92□□□□□ -0.5
NIF3L1-204ENST00000409357 ATP6V0A2Q9Y487 856 aa11.92□□□□□ -0.5
NIF3L1-204ENST00000409357 DDX58O95786 925 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 TNFRSF8P28908 595 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 PRPHP41219 470 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 CDR1P51861 262 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 NAP1L1P55209 391 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 GNGT1P63211 74 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 EXOSC10Q01780 885 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 CEBPZQ03701 1054 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 GRAPQ13588 217 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 SLC39A14Q15043 492 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 KARSQ15046 597 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 AP1ARQ63HQ0 302 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 IQCEQ6IPM2 695 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 DDX46Q7L014 1031 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 ZNF572Q7Z3I7 529 aaPredicted RBP11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 CNGA4Q8IV77 575 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 SLC35F6Q8N357 371 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 NOA1Q8NC60 698 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 GRAPLQ8TC17 118 aaPredicted RBP11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 CCDC85AQ96PX6 553 aaPredicted RBP11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 EPN3Q9H201 632 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 PLEKHA4Q9H4M7 779 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 CWC25Q9NXE8 425 aaPredicted RBP11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 MYO1FO00160 1098 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 NDUFAB1O14561 156 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 LIN7AO14910 233 aaPredicted RBP11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 POTEIP0CG38 1075 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 POTEJP0CG39 1038 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 SYKP43405 635 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 STK3Q13188 491 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 SF3B3Q15393 1217 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 FILIP1LQ4L180 1135 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 MYSM1Q5VVJ2 828 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 CRELD2Q6UXH1 353 aaPredicted RBP11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 RAD9BQ6WBX8 426 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 KDM7AQ6ZMT4 941 aa11.91□□□□□ -0.5
NIF3L1-204ENST00000409357 CCDC26Q8TAB7 109 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms