RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 NCAPHQ15003 741 aa16.24■□□□□ 0.19
CDC42SE2-202ENST00000395246 KRT25Q7Z3Z0 450 aa16.24■□□□□ 0.19
CDC42SE2-202ENST00000395246 JMJD4Q9H9V9 463 aa16.24■□□□□ 0.19
CDC42SE2-202ENST00000395246 ANO10Q9NW15 660 aa16.24■□□□□ 0.19
CDC42SE2-202ENST00000395246 ZNF70Q9UC06 446 aaPredicted RBP16.24■□□□□ 0.19
CDC42SE2-202ENST00000395246 PPIP5K2O43314 1243 aa16.24■□□□□ 0.19
CDC42SE2-202ENST00000395246 C21orf2O43822 256 aa16.24■□□□□ 0.19
CDC42SE2-202ENST00000395246 AKAP17AQ02040 695 aaKnown RBP16.24■□□□□ 0.19
CDC42SE2-202ENST00000395246 MRFAP1L1Q96HT8 127 aa16.24■□□□□ 0.19
CDC42SE2-202ENST00000395246 SCN4AP35499 1836 aa16.24■□□□□ 0.19
CDC42SE2-202ENST00000395246 KINO60870 393 aaKnown RBP16.24■□□□□ 0.19
CDC42SE2-202ENST00000395246 TTC38Q5R3I4 469 aa16.24■□□□□ 0.19
CDC42SE2-202ENST00000395246 PDXDC2PQ6P474 469 aa16.24■□□□□ 0.19
CDC42SE2-202ENST00000395246 TEPSINQ96N21 525 aa16.24■□□□□ 0.19
CDC42SE2-202ENST00000395246 ZNF112Q9UJU3 913 aa16.24■□□□□ 0.19
CDC42SE2-202ENST00000395246 PPP1R11O60927 126 aaPredicted RBP16.23■□□□□ 0.19
CDC42SE2-202ENST00000395246 MORC3Q14149 939 aa16.23■□□□□ 0.19
CDC42SE2-202ENST00000395246 HYIQ5T013 277 aa16.23■□□□□ 0.19
CDC42SE2-202ENST00000395246 CMTR1Q8N1G2 835 aaKnown RBP16.23■□□□□ 0.19
CDC42SE2-202ENST00000395246 KCTD17Q8N5Z5 321 aa16.23■□□□□ 0.19
CDC42SE2-202ENST00000395246 SAMD3Q8N6K7 520 aa16.23■□□□□ 0.19
CDC42SE2-202ENST00000395246 TOMM22Q9NS69 142 aa16.23■□□□□ 0.19
CDC42SE2-202ENST00000395246 KCNH3Q9ULD8 1083 aa16.23■□□□□ 0.19
CDC42SE2-202ENST00000395246 LCTP09848 1927 aa16.23■□□□□ 0.19
CDC42SE2-202ENST00000395246 GOLGA6L4A6NEF3 574 aa16.23■□□□□ 0.19
CDC42SE2-202ENST00000395246 USP17L5A8MUK1 530 aa16.23■□□□□ 0.19
CDC42SE2-202ENST00000395246 PHF20L1A8MW92 1017 aa16.23■□□□□ 0.19
CDC42SE2-202ENST00000395246 RRP36Q96EU6 259 aaKnown RBP16.23■□□□□ 0.19
CDC42SE2-202ENST00000395246 FRMPD4Q14CM0 1322 aa16.23■□□□□ 0.19
CDC42SE2-202ENST00000395246 GNA11P29992 359 aa16.22■□□□□ 0.19
CDC42SE2-202ENST00000395246 IGSF22Q8N9C0 903 aa16.22■□□□□ 0.19
CDC42SE2-202ENST00000395246 CUEDC2Q9H467 287 aa16.22■□□□□ 0.19
CDC42SE2-202ENST00000395246 FXR2P51116 673 aaKnown RBP eCLIP16.22■□□□□ 0.19
CDC42SE2-202ENST00000395246 CABP5Q9NP86 173 aa16.22■□□□□ 0.19
CDC42SE2-202ENST00000395246 TMX2Q9Y320 296 aa16.22■□□□□ 0.19
CDC42SE2-202ENST00000395246 SLFN14P0C7P3 912 aa16.22■□□□□ 0.19
CDC42SE2-202ENST00000395246 SYKP43405 635 aa16.22■□□□□ 0.19
CDC42SE2-202ENST00000395246 RRP1BQ14684 758 aaKnown RBP16.22■□□□□ 0.19
CDC42SE2-202ENST00000395246 NAP1L4Q99733 375 aaKnown RBP16.22■□□□□ 0.19
CDC42SE2-202ENST00000395246 PRELPP51888 382 aa16.21■□□□□ 0.19
CDC42SE2-202ENST00000395246 DALRD3Q5D0E6 543 aaKnown RBP16.21■□□□□ 0.19
CDC42SE2-202ENST00000395246 NAP1L2Q9ULW6 460 aaPredicted RBP16.21■□□□□ 0.19
CDC42SE2-202ENST00000395246 PCDHAC2Q9Y5I4 1007 aa16.21■□□□□ 0.19
CDC42SE2-202ENST00000395246 A0A1B0GVL5 298 aa16.21■□□□□ 0.19
CDC42SE2-202ENST00000395246 ZBTB5O15062 677 aa16.21■□□□□ 0.19
CDC42SE2-202ENST00000395246 TPM3P06753 285 aa16.21■□□□□ 0.19
CDC42SE2-202ENST00000395246 SCNN1DP51172 638 aa16.21■□□□□ 0.19
CDC42SE2-202ENST00000395246 FOXD4L6Q3SYB3 417 aaPredicted RBP16.21■□□□□ 0.19
CDC42SE2-202ENST00000395246 ANO6Q4KMQ2 910 aa16.21■□□□□ 0.19
CDC42SE2-202ENST00000395246 FOXD4L3Q6VB84 417 aaPredicted RBP16.21■□□□□ 0.19
CDC42SE2-202ENST00000395246 HDAC9Q9UKV0 1011 aa16.21■□□□□ 0.19
CDC42SE2-202ENST00000395246 SSC5DA1L4H1 1573 aa16.21■□□□□ 0.18
CDC42SE2-202ENST00000395246 CLCN1P35523 988 aa16.2■□□□□ 0.18
CDC42SE2-202ENST00000395246 DPYDQ12882 1025 aa16.2■□□□□ 0.18
CDC42SE2-202ENST00000395246 LONRF3Q496Y0 759 aa16.2■□□□□ 0.18
CDC42SE2-202ENST00000395246 JAG1P78504 1218 aa16.2■□□□□ 0.18
CDC42SE2-202ENST00000395246 GRIN1Q05586 938 aa16.2■□□□□ 0.18
CDC42SE2-202ENST00000395246 CSRNP2Q9H175 543 aa16.2■□□□□ 0.18
CDC42SE2-202ENST00000395246 A0A087X0B3 334 aa16.2■□□□□ 0.18
CDC42SE2-202ENST00000395246 FAM205CA6NFA0 338 aa16.2■□□□□ 0.18
CDC42SE2-202ENST00000395246 CXCL9Q07325 125 aa16.2■□□□□ 0.18
CDC42SE2-202ENST00000395246 PDIA5Q14554 519 aa16.2■□□□□ 0.18
CDC42SE2-202ENST00000395246 CERKLQ49MI3 558 aaPredicted RBP16.2■□□□□ 0.18
CDC42SE2-202ENST00000395246 ADGRF4Q8IZF3 695 aa16.2■□□□□ 0.18
CDC42SE2-202ENST00000395246 GTPBP4Q9BZE4 634 aaKnown RBP16.2■□□□□ 0.18
CDC42SE2-202ENST00000395246 CYP3A4P08684 503 aa16.19■□□□□ 0.18
CDC42SE2-202ENST00000395246 TNIP1Q15025 636 aa16.19■□□□□ 0.18
CDC42SE2-202ENST00000395246 SASS6Q6UVJ0 657 aa16.19■□□□□ 0.18
CDC42SE2-202ENST00000395246 C11orf57Q6ZUT1 292 aaPredicted RBP16.19■□□□□ 0.18
CDC42SE2-202ENST00000395246 C6orf50Q9HD87 102 aa16.19■□□□□ 0.18
CDC42SE2-202ENST00000395246 PPP2R3BQ9Y5P8 575 aa16.19■□□□□ 0.18
CDC42SE2-202ENST00000395246 BMP6P22004 513 aa16.19■□□□□ 0.18
CDC42SE2-202ENST00000395246 KIAA0825Q8IV33 1275 aa16.19■□□□□ 0.18
CDC42SE2-202ENST00000395246 FAM13BQ9NYF5 915 aa16.19■□□□□ 0.18
CDC42SE2-202ENST00000395246 CCDC39Q9UFE4 941 aa16.19■□□□□ 0.18
CDC42SE2-202ENST00000395246 PITPNM2Q9BZ72 1349 aa16.19■□□□□ 0.18
CDC42SE2-202ENST00000395246 COL11A1P12107 1806 aaPredicted RBP16.18■□□□□ 0.18
CDC42SE2-202ENST00000395246 NOM1Q5C9Z4 860 aaKnown RBP16.18■□□□□ 0.18
CDC42SE2-202ENST00000395246 UPF1Q92900 1129 aaKnown RBP eCLIP16.18■□□□□ 0.18
CDC42SE2-202ENST00000395246 RANBP17Q9H2T7 1088 aaKnown RBP16.18■□□□□ 0.18
CDC42SE2-202ENST00000395246 CIITAP33076 1130 aa16.18■□□□□ 0.18
CDC42SE2-202ENST00000395246 AP3B2Q13367 1082 aa16.18■□□□□ 0.18
CDC42SE2-202ENST00000395246 USP17L2Q6R6M4 530 aa16.18■□□□□ 0.18
CDC42SE2-202ENST00000395246 GSDMAQ96QA5 445 aa16.18■□□□□ 0.18
CDC42SE2-202ENST00000395246 GCFC2P16383 781 aaKnown RBP16.18■□□□□ 0.18
CDC42SE2-202ENST00000395246 ZNF18P17022 549 aa16.18■□□□□ 0.18
CDC42SE2-202ENST00000395246 POLD1P28340 1107 aa16.18■□□□□ 0.18
CDC42SE2-202ENST00000395246 ERCC5P28715 1186 aaPredicted RBP16.18■□□□□ 0.18
CDC42SE2-202ENST00000395246 NLRP5P59047 1200 aa16.18■□□□□ 0.18
CDC42SE2-202ENST00000395246 TAOK3Q9H2K8 898 aa16.18■□□□□ 0.18
CDC42SE2-202ENST00000395246 EEF2P13639 858 aaKnown RBP16.17■□□□□ 0.18
CDC42SE2-202ENST00000395246 KCNJ6P48051 423 aa16.17■□□□□ 0.18
CDC42SE2-202ENST00000395246 USP11P51784 963 aa16.17■□□□□ 0.18
CDC42SE2-202ENST00000395246 KCNB1Q14721 858 aa16.17■□□□□ 0.18
CDC42SE2-202ENST00000395246 NIM1KQ8IY84 436 aa16.17■□□□□ 0.18
CDC42SE2-202ENST00000395246 CLIC6Q96NY7 704 aa16.17■□□□□ 0.18
CDC42SE2-202ENST00000395246 NAT10Q9H0A0 1025 aaKnown RBP16.17■□□□□ 0.18
CDC42SE2-202ENST00000395246 KBTBD4Q9NVX7 518 aa16.17■□□□□ 0.18
CDC42SE2-202ENST00000395246 PTGDRQ13258 359 aa16.17■□□□□ 0.18
CDC42SE2-202ENST00000395246 DHX8Q14562 1220 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms