RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 BRI3BPQ8WY22 251 aa19.78■□□□□ 0.76
ERCC2-202ENST00000391942 LZTS2Q9BRK4 669 aa19.78■□□□□ 0.76
ERCC2-202ENST00000391942 DAXXQ9UER7 740 aaPredicted RBP19.78■□□□□ 0.76
ERCC2-202ENST00000391942 FEM1BQ9UK73 627 aa19.78■□□□□ 0.76
ERCC2-202ENST00000391942 BAZ2BQ9UIF8 2168 aaKnown RBP19.77■□□□□ 0.76
ERCC2-202ENST00000391942 USP17L15C9J2P7 530 aa19.77■□□□□ 0.76
ERCC2-202ENST00000391942 USP17L13C9JLJ4 530 aa19.77■□□□□ 0.76
ERCC2-202ENST00000391942 USP17L11C9JVI0 530 aa19.77■□□□□ 0.76
ERCC2-202ENST00000391942 USP17L18D6R9N7 530 aa19.77■□□□□ 0.76
ERCC2-202ENST00000391942 USP17L22D6RA61 530 aa19.77■□□□□ 0.76
ERCC2-202ENST00000391942 USP17L17D6RBQ6 530 aa19.77■□□□□ 0.76
ERCC2-202ENST00000391942 USP17L19D6RCP7 530 aa19.77■□□□□ 0.76
ERCC2-202ENST00000391942 USP17L20D6RJB6 530 aa19.77■□□□□ 0.76
ERCC2-202ENST00000391942 CDKL5O76039 1030 aa19.77■□□□□ 0.76
ERCC2-202ENST00000391942 IFNAR1P17181 557 aa19.77■□□□□ 0.76
ERCC2-202ENST00000391942 USP17L24Q0WX57 530 aa19.77■□□□□ 0.76
ERCC2-202ENST00000391942 SYDE2Q5VT97 1194 aa19.77■□□□□ 0.76
ERCC2-202ENST00000391942 GPAT2Q6NUI2 795 aa19.77■□□□□ 0.76
ERCC2-202ENST00000391942 AGTPBP1Q9UPW5 1226 aa19.77■□□□□ 0.76
ERCC2-202ENST00000391942 RASSF10A6NK89 507 aa19.76■□□□□ 0.75
ERCC2-202ENST00000391942 SSRP1Q08945 709 aaKnown RBP19.76■□□□□ 0.75
ERCC2-202ENST00000391942 BTNL9Q6UXG8 535 aa19.76■□□□□ 0.75
ERCC2-202ENST00000391942 CATSPERGQ6ZRH7 1159 aa19.76■□□□□ 0.75
ERCC2-202ENST00000391942 HOMER1Q86YM7 354 aa19.76■□□□□ 0.75
ERCC2-202ENST00000391942 CHURC1Q8WUH1 139 aa19.76■□□□□ 0.75
ERCC2-202ENST00000391942 ZIC5Q96T25 663 aa19.76■□□□□ 0.75
ERCC2-202ENST00000391942 SLF1Q9BQI6 1058 aa19.76■□□□□ 0.75
ERCC2-202ENST00000391942 LLPHQ9BRT6 129 aaKnown RBP19.76■□□□□ 0.75
ERCC2-202ENST00000391942 SPZ1Q9BXG8 430 aa19.76■□□□□ 0.75
ERCC2-202ENST00000391942 PRR12Q9ULL5 1215 aa19.76■□□□□ 0.75
ERCC2-202ENST00000391942 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.76■□□□□ 0.75
ERCC2-202ENST00000391942 V9GY48 417 aaPredicted RBP19.76■□□□□ 0.75
ERCC2-202ENST00000391942 BTBD19C9JJ37 291 aa19.75■□□□□ 0.75
ERCC2-202ENST00000391942 FAM160B2Q86V87 743 aa19.75■□□□□ 0.75
ERCC2-202ENST00000391942 CAPNS2Q96L46 248 aa19.75■□□□□ 0.75
ERCC2-202ENST00000391942 PIGSQ96S52 555 aa19.75■□□□□ 0.75
ERCC2-202ENST00000391942 RIOX1Q9H6W3 641 aa19.75■□□□□ 0.75
ERCC2-202ENST00000391942 JMJD4Q9H9V9 463 aa19.75■□□□□ 0.75
ERCC2-202ENST00000391942 SMC3Q9UQE7 1217 aa19.75■□□□□ 0.75
ERCC2-202ENST00000391942 PARP14Q460N5 1801 aa19.75■□□□□ 0.75
ERCC2-202ENST00000391942 MANSC4A6NHS7 340 aaPredicted RBP19.74■□□□□ 0.75
ERCC2-202ENST00000391942 AOC2O75106 756 aa19.74■□□□□ 0.75
ERCC2-202ENST00000391942 FMNL1O95466 1100 aaPredicted RBP19.74■□□□□ 0.75
ERCC2-202ENST00000391942 AKAP17AQ02040 695 aaKnown RBP19.74■□□□□ 0.75
ERCC2-202ENST00000391942 TRIM22Q8IYM9 498 aa19.74■□□□□ 0.75
ERCC2-202ENST00000391942 SMARCC2Q8TAQ2 1214 aa19.74■□□□□ 0.75
ERCC2-202ENST00000391942 PTPN18Q99952 460 aa19.74■□□□□ 0.75
ERCC2-202ENST00000391942 ORC3Q9UBD5 711 aaPredicted RBP19.74■□□□□ 0.75
ERCC2-202ENST00000391942 PPP1R9AQ9ULJ8 1098 aa19.74■□□□□ 0.75
ERCC2-202ENST00000391942 MYH6P13533 1939 aa19.74■□□□□ 0.75
ERCC2-202ENST00000391942 PLA2G6O60733 806 aa19.73■□□□□ 0.75
ERCC2-202ENST00000391942 FDPSP14324 419 aaKnown RBP19.73■□□□□ 0.75
ERCC2-202ENST00000391942 GJB2P29033 226 aa19.73■□□□□ 0.75
ERCC2-202ENST00000391942 FOSBP53539 338 aa19.73■□□□□ 0.75
ERCC2-202ENST00000391942 IRX3P78415 501 aaPredicted RBP19.73■□□□□ 0.75
ERCC2-202ENST00000391942 COG2Q14746 738 aa19.73■□□□□ 0.75
ERCC2-202ENST00000391942 FAM43AQ8N2R8 423 aa19.73■□□□□ 0.75
ERCC2-202ENST00000391942 PRPF38AQ8NAV1 312 aaKnown RBP19.73■□□□□ 0.75
ERCC2-202ENST00000391942 ATG4CQ96DT6 458 aa19.73■□□□□ 0.75
ERCC2-202ENST00000391942 RRP36Q96EU6 259 aaKnown RBP19.73■□□□□ 0.75
ERCC2-202ENST00000391942 INTS4Q96HW7 963 aaKnown RBP19.73■□□□□ 0.75
ERCC2-202ENST00000391942 IPO9Q96P70 1041 aaKnown RBP19.73■□□□□ 0.75
ERCC2-202ENST00000391942 ASCC2Q9H1I8 757 aaPredicted RBP19.73■□□□□ 0.75
ERCC2-202ENST00000391942 RLFQ13129 1914 aa19.73■□□□□ 0.75
ERCC2-202ENST00000391942 PDHXO00330 501 aa19.73■□□□□ 0.75
ERCC2-202ENST00000391942 PRPF3O43395 683 aaKnown RBP19.73■□□□□ 0.75
ERCC2-202ENST00000391942 SMARCA1P28370 1054 aa19.73■□□□□ 0.75
ERCC2-202ENST00000391942 HOXA7P31268 230 aaPredicted RBP19.73■□□□□ 0.75
ERCC2-202ENST00000391942 KIF23Q02241 960 aaPredicted RBP19.73■□□□□ 0.75
ERCC2-202ENST00000391942 PABPC4Q13310 644 aaKnown RBP eCLIP19.73■□□□□ 0.757e-6■□□□□ 8.5
ERCC2-202ENST00000391942 CDC37Q16543 378 aaPredicted RBP19.73■□□□□ 0.75
ERCC2-202ENST00000391942 CCDC174Q6PII3 467 aa19.73■□□□□ 0.75
ERCC2-202ENST00000391942 AIFM3Q96NN9 605 aa19.73■□□□□ 0.75
ERCC2-202ENST00000391942 RNF26Q9BY78 433 aaPredicted RBP19.73■□□□□ 0.75
ERCC2-202ENST00000391942 TESPA1A2RU30 521 aaPredicted RBP19.72■□□□□ 0.75
ERCC2-202ENST00000391942 OSBPP22059 807 aa19.72■□□□□ 0.75
ERCC2-202ENST00000391942 DSG3P32926 999 aa19.72■□□□□ 0.75
ERCC2-202ENST00000391942 C1QTNF8P60827 252 aa19.72■□□□□ 0.75
ERCC2-202ENST00000391942 ANKRD23Q86SG2 305 aa19.72■□□□□ 0.75
ERCC2-202ENST00000391942 P2RX7Q99572 595 aaKnown RBP19.72■□□□□ 0.75
ERCC2-202ENST00000391942 SEC63Q9UGP8 760 aaKnown RBP19.72■□□□□ 0.75
ERCC2-202ENST00000391942 STK36Q9NRP7 1315 aa19.71■□□□□ 0.75
ERCC2-202ENST00000391942 SPDYE16A6NNV3 312 aaPredicted RBP19.71■□□□□ 0.75
ERCC2-202ENST00000391942 IGF2BP3O00425 579 aaKnown RBP eCLIP19.71■□□□□ 0.75
ERCC2-202ENST00000391942 CYP2C8P10632 490 aa19.71■□□□□ 0.75
ERCC2-202ENST00000391942 HMGN5P82970 282 aaKnown RBP19.71■□□□□ 0.75
ERCC2-202ENST00000391942 PKN1Q16512 942 aa19.71■□□□□ 0.75
ERCC2-202ENST00000391942 QRICH1Q2TAL8 776 aa19.71■□□□□ 0.75
ERCC2-202ENST00000391942 FAM184AQ8NB25 1140 aa19.71■□□□□ 0.75
ERCC2-202ENST00000391942 GPKOWQ92917 476 aaPredicted RBP eCLIP19.71■□□□□ 0.75
ERCC2-202ENST00000391942 CTDP1Q9Y5B0 961 aaPredicted RBP19.71■□□□□ 0.75
ERCC2-202ENST00000391942 VWA5AO00534 786 aa19.7■□□□□ 0.74
ERCC2-202ENST00000391942 ZBTB5O15062 677 aa19.7■□□□□ 0.74
ERCC2-202ENST00000391942 DEXIO95424 95 aa19.7■□□□□ 0.74
ERCC2-202ENST00000391942 TAL1P17542 331 aaPredicted RBP19.7■□□□□ 0.74
ERCC2-202ENST00000391942 VEGFBP49765 207 aa19.7■□□□□ 0.74
ERCC2-202ENST00000391942 SREBF2Q12772 1141 aa19.7■□□□□ 0.74
ERCC2-202ENST00000391942 NOGQ13253 232 aa19.7■□□□□ 0.74
ERCC2-202ENST00000391942 MTMR8Q96EF0 704 aa19.7■□□□□ 0.74
ERCC2-202ENST00000391942 RANBP17Q9H2T7 1088 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms