RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 PPFIA3O75145 1194 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 RPL13P26373 211 aaKnown RBP6.98□□□□□ -1.29
PTPN3-202ENST00000374541 RFC1P35251 1148 aaPredicted RBP6.98□□□□□ -1.29
PTPN3-202ENST00000374541 HAND2P61296 217 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 GUCY1B3Q02153 619 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 SP3Q02447 781 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 HDAC1Q13547 482 aaPredicted RBP6.98□□□□□ -1.29
PTPN3-202ENST00000374541 PPP1R7Q15435 360 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 TBC1D9Q6ZT07 1266 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 VPS52Q8N1B4 723 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 PRDM15P57071 1507 aaPredicted RBP6.98□□□□□ -1.29
PTPN3-202ENST00000374541 ERVV-1B6SEH8 477 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 UPP2O95045 317 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 F13A1P00488 732 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 ABL1P00519 1130 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 CEP85LQ5SZL2 805 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 SEPT14Q6ZU15 432 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 DPH6Q7L8W6 267 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 NECAB2Q7Z6G3 386 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 TMEM39AQ9NV64 488 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 INSRP06213 1382 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 RASSF2P50749 326 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 INHBEP58166 350 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 ZBTB17Q13105 803 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 WTAPQ15007 396 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 SSH1Q8WYL5 1049 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 CCT6BQ92526 530 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 SLC26A6Q9BXS9 759 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 HMX1Q9NP08 348 aaPredicted RBP6.97□□□□□ -1.29
PTPN3-202ENST00000374541 PLCB1Q9NQ66 1216 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 CCPG1Q9ULG6 757 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 GLTPD2A6NH11 291 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 USP17L5A8MUK1 530 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 ZBTB43O43298 467 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 RILPL1Q5EBL4 403 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 CCDC62Q6P9F0 684 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 GLT1D1Q96MS3 346 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 PPP1R9BQ96SB3 815 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 MGEA5O60502 916 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 ASIC1P78348 528 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 GBP7Q8N8V2 638 aaPredicted RBP6.97□□□□□ -1.29
PTPN3-202ENST00000374541 RGS22Q8NE09 1264 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 NLGN2Q8NFZ4 835 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 ALG1Q9BT22 464 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 MRVI1Q9Y6F6 885 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 MYO5BQ9ULV0 1848 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 BUB1BO60566 1050 aaPredicted RBP6.97□□□□□ -1.29
PTPN3-202ENST00000374541 GDF11O95390 407 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 HARSP12081 509 aaKnown RBP6.97□□□□□ -1.29
PTPN3-202ENST00000374541 NBPF20Q3BBV1 942 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 LGSNQ5TDP6 509 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 SRGAP1Q7Z6B7 1085 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 MCF2L2Q86YR7 1114 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 AOPEPQ8N6M6 819 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.97□□□□□ -1.29
PTPN3-202ENST00000374541 PRPF31Q8WWY3 499 aaKnown RBP6.97□□□□□ -1.29
PTPN3-202ENST00000374541 INTS4Q96HW7 963 aaKnown RBP6.97□□□□□ -1.29
PTPN3-202ENST00000374541 TMX3Q96JJ7 454 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 RPGRIP1Q96KN7 1286 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 KCNK9Q9NPC2 374 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 MYOZ2Q9NPC6 264 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 ASNSP08243 561 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 RGS2P41220 211 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 CRKP46108 304 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 CCT2P78371 535 aaKnown RBP6.97□□□□□ -1.29
PTPN3-202ENST00000374541 KRT79Q5XKE5 535 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 TFIP11Q9UBB9 837 aaKnown RBP6.97□□□□□ -1.29
PTPN3-202ENST00000374541 FAN1Q9Y2M0 1017 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 TACC3Q9Y6A5 838 aa6.97□□□□□ -1.29
PTPN3-202ENST00000374541 DDX39AO00148 427 aaKnown RBP6.96□□□□□ -1.29
PTPN3-202ENST00000374541 NDUFAB1O14561 156 aa6.96□□□□□ -1.29
PTPN3-202ENST00000374541 FAM13AO94988 1023 aa6.96□□□□□ -1.29
PTPN3-202ENST00000374541 C6orf222P0C671 652 aaPredicted RBP6.96□□□□□ -1.29
PTPN3-202ENST00000374541 EEF2P13639 858 aaKnown RBP6.96□□□□□ -1.29
PTPN3-202ENST00000374541 ERCC5P28715 1186 aaPredicted RBP6.96□□□□□ -1.29
PTPN3-202ENST00000374541 PPFIA1Q13136 1202 aa6.96□□□□□ -1.29
PTPN3-202ENST00000374541 MCUR1Q96AQ8 359 aa6.96□□□□□ -1.29
PTPN3-202ENST00000374541 HAUS8Q9BT25 410 aa6.96□□□□□ -1.29
PTPN3-202ENST00000374541 PPFIA2O75334 1257 aa6.96□□□□□ -1.29
PTPN3-202ENST00000374541 PLCB3Q01970 1234 aa6.96□□□□□ -1.29
PTPN3-202ENST00000374541 KIF23Q02241 960 aaPredicted RBP6.96□□□□□ -1.29
PTPN3-202ENST00000374541 PRR5LQ6MZQ0 368 aa6.96□□□□□ -1.29
PTPN3-202ENST00000374541 PHLDB3Q6NSJ2 640 aa6.96□□□□□ -1.29
PTPN3-202ENST00000374541 IFT20Q8IY31 132 aa6.96□□□□□ -1.29
PTPN3-202ENST00000374541 RBM46Q8TBY0 533 aaKnown RBP6.96□□□□□ -1.29
PTPN3-202ENST00000374541 CETN3O15182 167 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 TBC1D8O95759 1140 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 PPP2R3AQ06190 1150 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 TYRO3Q06418 890 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 RTN1Q16799 776 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 CCDC157Q569K6 752 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 C7orf61Q8IZ16 206 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 SPICE1Q8N0Z3 855 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 GANCQ8TET4 914 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 HVCN1Q96D96 273 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 ZFYVE9O95405 1425 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 SPTLC2O15270 562 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 PSMD2Q13200 908 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 RSBN1LQ6PCB5 846 aaPredicted RBP6.96□□□□□ -1.3
PTPN3-202ENST00000374541 MICU3Q86XE3 530 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms