RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 SLFN14P0C7P3 912 aa14.36□□□□□ -0.11
PRPF4-202ENST00000374199 LONP1P36776 959 aaKnown RBP14.36□□□□□ -0.11
PRPF4-202ENST00000374199 SEMA3FQ13275 785 aa14.36□□□□□ -0.11
PRPF4-202ENST00000374199 PICALMQ13492 652 aa14.36□□□□□ -0.11
PRPF4-202ENST00000374199 GPATCH4Q5T3I0 446 aaKnown RBP14.36□□□□□ -0.11
PRPF4-202ENST00000374199 DEFB132Q7Z7B7 95 aa14.36□□□□□ -0.11
PRPF4-202ENST00000374199 AGBL3Q8NEM8 1001 aa14.36□□□□□ -0.11
PRPF4-202ENST00000374199 CCDC12Q8WUD4 166 aaPredicted RBP14.36□□□□□ -0.11
PRPF4-202ENST00000374199 DCAF4Q8WV16 495 aa14.36□□□□□ -0.11
PRPF4-202ENST00000374199 GMCL1Q96IK5 515 aa14.36□□□□□ -0.11
PRPF4-202ENST00000374199 C21orf2O43822 256 aa14.36□□□□□ -0.11
PRPF4-202ENST00000374199 PPP1R11O60927 126 aaPredicted RBP14.36□□□□□ -0.11
PRPF4-202ENST00000374199 TPM3P06753 285 aa14.36□□□□□ -0.11
PRPF4-202ENST00000374199 PTGDRQ13258 359 aa14.36□□□□□ -0.11
PRPF4-202ENST00000374199 USP49Q70CQ1 688 aa14.36□□□□□ -0.11
PRPF4-202ENST00000374199 KIAA0825Q8IV33 1275 aa14.36□□□□□ -0.11
PRPF4-202ENST00000374199 NAT10Q9H0A0 1025 aaKnown RBP14.36□□□□□ -0.11
PRPF4-202ENST00000374199 FAM13BQ9NYF5 915 aa14.36□□□□□ -0.11
PRPF4-202ENST00000374199 SPDYE2Q495Y8 402 aa14.35□□□□□ -0.11
PRPF4-202ENST00000374199 BTNL9Q6UXG8 535 aa14.35□□□□□ -0.11
PRPF4-202ENST00000374199 RRP36Q96EU6 259 aaKnown RBP14.35□□□□□ -0.11
PRPF4-202ENST00000374199 PYM1Q9BRP8 204 aaKnown RBP14.35□□□□□ -0.11
PRPF4-202ENST00000374199 JMJD4Q9H9V9 463 aa14.35□□□□□ -0.11
PRPF4-202ENST00000374199 CFAP100Q494V2 611 aa14.35□□□□□ -0.11
PRPF4-202ENST00000374199 PIK3AP1Q6ZUJ8 805 aa14.35□□□□□ -0.11
PRPF4-202ENST00000374199 PRMT6Q96LA8 375 aaPredicted RBP14.35□□□□□ -0.11
PRPF4-202ENST00000374199 SDF4Q9BRK5 362 aa14.35□□□□□ -0.11
PRPF4-202ENST00000374199 KCNF1Q9H3M0 494 aa14.35□□□□□ -0.11
PRPF4-202ENST00000374199 PHIPQ8WWQ0 1821 aa14.35□□□□□ -0.11
PRPF4-202ENST00000374199 PPIP5K2O43314 1243 aa14.34□□□□□ -0.11
PRPF4-202ENST00000374199 DPYDQ12882 1025 aa14.34□□□□□ -0.11
PRPF4-202ENST00000374199 POSTNQ15063 836 aa14.34□□□□□ -0.11
PRPF4-202ENST00000374199 KRT25Q7Z3Z0 450 aa14.34□□□□□ -0.11
PRPF4-202ENST00000374199 SPTLC3Q9NUV7 552 aa14.34□□□□□ -0.11
PRPF4-202ENST00000374199 HERC5Q9UII4 1024 aaKnown RBP14.34□□□□□ -0.11
PRPF4-202ENST00000374199 ATF5Q9Y2D1 282 aaPredicted RBP14.34□□□□□ -0.11
PRPF4-202ENST00000374199 PNMA6FA0A0J9YX94 578 aa14.34□□□□□ -0.11
PRPF4-202ENST00000374199 PNOCQ13519 176 aa14.34□□□□□ -0.11
PRPF4-202ENST00000374199 TMEM179Q6ZVK1 233 aa14.34□□□□□ -0.11
PRPF4-202ENST00000374199 CRYGNQ8WXF5 182 aa14.34□□□□□ -0.11
PRPF4-202ENST00000374199 SYMPKQ92797 1274 aaKnown RBP14.34□□□□□ -0.11
PRPF4-202ENST00000374199 KANSL2Q9H9L4 492 aa14.34□□□□□ -0.11
PRPF4-202ENST00000374199 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.34□□□□□ -0.11
PRPF4-202ENST00000374199 GOLGA8HP0CJ92 632 aa14.34□□□□□ -0.11
PRPF4-202ENST00000374199 RIC8AQ9NPQ8 531 aa14.34□□□□□ -0.11
PRPF4-202ENST00000374199 RRP1BQ14684 758 aaKnown RBP14.33□□□□□ -0.12
PRPF4-202ENST00000374199 FAM83AQ86UY5 434 aa14.33□□□□□ -0.12
PRPF4-202ENST00000374199 MTMR9Q96QG7 549 aa14.33□□□□□ -0.12
PRPF4-202ENST00000374199 PIGSQ96S52 555 aa14.33□□□□□ -0.12
PRPF4-202ENST00000374199 CCSER1Q9C0I3 900 aa14.33□□□□□ -0.12
PRPF4-202ENST00000374199 KCND1Q9NSA2 647 aa14.33□□□□□ -0.12
PRPF4-202ENST00000374199 MAN1B1Q9UKM7 699 aa14.33□□□□□ -0.12
PRPF4-202ENST00000374199 PCDHA5Q9Y5H7 936 aa14.33□□□□□ -0.12
PRPF4-202ENST00000374199 DOCK1Q14185 1865 aa14.33□□□□□ -0.12
PRPF4-202ENST00000374199 PSMD14O00487 310 aa14.33□□□□□ -0.12
PRPF4-202ENST00000374199 FOXN1O15353 648 aa14.33□□□□□ -0.12
PRPF4-202ENST00000374199 POLR2DO15514 142 aaKnown RBP14.33□□□□□ -0.12
PRPF4-202ENST00000374199 GNA11P29992 359 aa14.33□□□□□ -0.12
PRPF4-202ENST00000374199 ZNF280AP59817 542 aaPredicted RBP14.33□□□□□ -0.12
PRPF4-202ENST00000374199 JAG1P78504 1218 aa14.33□□□□□ -0.12
PRPF4-202ENST00000374199 EPSTI1Q96J88 318 aa14.33□□□□□ -0.12
PRPF4-202ENST00000374199 MTRQ99707 1265 aa14.33□□□□□ -0.12
PRPF4-202ENST00000374199 SERTAD1Q9UHV2 236 aa14.33□□□□□ -0.12
PRPF4-202ENST00000374199 ZNRF3Q9ULT6 936 aa14.33□□□□□ -0.12
PRPF4-202ENST00000374199 PRR29P0C7W0 189 aa14.32□□□□□ -0.12
PRPF4-202ENST00000374199 ADGRF4Q8IZF3 695 aa14.32□□□□□ -0.12
PRPF4-202ENST00000374199 CNNM3Q8NE01 707 aa14.32□□□□□ -0.12
PRPF4-202ENST00000374199 FAM151AQ8WW52 585 aa14.32□□□□□ -0.12
PRPF4-202ENST00000374199 ERCC4Q92889 916 aaPredicted RBP14.32□□□□□ -0.12
PRPF4-202ENST00000374199 MBOAT7Q96N66 472 aa14.32□□□□□ -0.12
PRPF4-202ENST00000374199 MED15Q96RN5 788 aa14.32□□□□□ -0.12
PRPF4-202ENST00000374199 ZNF18P17022 549 aa14.32□□□□□ -0.12
PRPF4-202ENST00000374199 TPRNQ4KMQ1 711 aa14.32□□□□□ -0.12
PRPF4-202ENST00000374199 PAGE5Q96GU1 130 aa14.32□□□□□ -0.12
PRPF4-202ENST00000374199 PLA2G6O60733 806 aa14.32□□□□□ -0.12
PRPF4-202ENST00000374199 ZNF174Q15697 407 aa14.32□□□□□ -0.12
PRPF4-202ENST00000374199 MTFR1LQ9H019 292 aa14.32□□□□□ -0.12
PRPF4-202ENST00000374199 C6orf50Q9HD87 102 aa14.32□□□□□ -0.12
PRPF4-202ENST00000374199 CLIP2Q9UDT6 1046 aa14.32□□□□□ -0.12
PRPF4-202ENST00000374199 NAALADL2Q58DX5 795 aa14.31□□□□□ -0.12
PRPF4-202ENST00000374199 HEATR3Q7Z4Q2 680 aa14.31□□□□□ -0.12
PRPF4-202ENST00000374199 IGSF22Q8N9C0 903 aa14.31□□□□□ -0.12
PRPF4-202ENST00000374199 FBXW7Q969H0 707 aa14.31□□□□□ -0.12
PRPF4-202ENST00000374199 AK8Q96MA6 479 aa14.31□□□□□ -0.12
PRPF4-202ENST00000374199 HOOK1Q9UJC3 728 aaKnown RBP14.31□□□□□ -0.12
PRPF4-202ENST00000374199 A0A087WWV3 80 aa14.31□□□□□ -0.12
PRPF4-202ENST00000374199 G3V3G9 751 aa14.31□□□□□ -0.12
PRPF4-202ENST00000374199 ZBTB5O15062 677 aa14.31□□□□□ -0.12
PRPF4-202ENST00000374199 CERKLQ49MI3 558 aaPredicted RBP14.31□□□□□ -0.12
PRPF4-202ENST00000374199 DCAF8Q5TAQ9 597 aa14.31□□□□□ -0.12
PRPF4-202ENST00000374199 PPP4R3AQ6IN85 833 aa14.31□□□□□ -0.12
PRPF4-202ENST00000374199 LRRC47Q8N1G4 583 aaKnown RBP14.31□□□□□ -0.12
PRPF4-202ENST00000374199 MLKLQ8NB16 471 aa14.31□□□□□ -0.12
PRPF4-202ENST00000374199 GSDMAQ96QA5 445 aa14.31□□□□□ -0.12
PRPF4-202ENST00000374199 TMEM60Q9H2L4 133 aa14.31□□□□□ -0.12
PRPF4-202ENST00000374199 ZNF70Q9UC06 446 aaPredicted RBP14.31□□□□□ -0.12
PRPF4-202ENST00000374199 SBF1O95248 1867 aa14.31□□□□□ -0.12
PRPF4-202ENST00000374199 SMCO2A6NFE2 343 aa14.3□□□□□ -0.12
PRPF4-202ENST00000374199 MYL1P05976 194 aa14.3□□□□□ -0.12
PRPF4-202ENST00000374199 EEF2P13639 858 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms