RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 GMCL1P1Q8NEA9 526 aa11.16□□□□□ -0.62
ITM2A-201ENST00000373298 BRF1Q92994 677 aa11.16□□□□□ -0.62
ITM2A-201ENST00000373298 TTC14Q96N46 770 aa11.16□□□□□ -0.62
ITM2A-201ENST00000373298 P2RX7Q99572 595 aaKnown RBP11.16□□□□□ -0.62
ITM2A-201ENST00000373298 TBC1D2Q9BYX2 928 aa11.16□□□□□ -0.62
ITM2A-201ENST00000373298 TM6SF1Q9BZW5 370 aa11.16□□□□□ -0.62
ITM2A-201ENST00000373298 ASCC2Q9H1I8 757 aaPredicted RBP11.16□□□□□ -0.62
ITM2A-201ENST00000373298 RNF186Q9NXI6 227 aa11.16□□□□□ -0.62
ITM2A-201ENST00000373298 TMOD4Q9NZQ9 345 aa11.16□□□□□ -0.62
ITM2A-201ENST00000373298 DOCK3Q8IZD9 2030 aa11.15□□□□□ -0.62
ITM2A-201ENST00000373298 CD2BP2O95400 341 aaKnown RBP11.15□□□□□ -0.62
ITM2A-201ENST00000373298 SLC16A2P36021 539 aa11.15□□□□□ -0.62
ITM2A-201ENST00000373298 ANAPC15P60006 121 aa11.15□□□□□ -0.62
ITM2A-201ENST00000373298 CRHR2Q13324 411 aa11.15□□□□□ -0.62
ITM2A-201ENST00000373298 CATSPERGQ6ZRH7 1159 aa11.15□□□□□ -0.62
ITM2A-201ENST00000373298 ANKRD23Q86SG2 305 aa11.15□□□□□ -0.62
ITM2A-201ENST00000373298 NBPF11Q86T75 865 aa11.15□□□□□ -0.62
ITM2A-201ENST00000373298 KHSRPQ92945 711 aaKnown RBP eCLIP11.15□□□□□ -0.62
ITM2A-201ENST00000373298 TANGO6Q9C0B7 1094 aa11.15□□□□□ -0.62
ITM2A-201ENST00000373298 KAT14Q9H8E8 782 aa11.15□□□□□ -0.62
ITM2A-201ENST00000373298 TXNRD2Q9NNW7 524 aa11.15□□□□□ -0.62
ITM2A-201ENST00000373298 GPCPD1Q9NPB8 672 aa11.15□□□□□ -0.62
ITM2A-201ENST00000373298 ECM2O94769 699 aaPredicted RBP11.14□□□□□ -0.63
ITM2A-201ENST00000373298 SNHG28P0DPA3 235 aa11.14□□□□□ -0.63
ITM2A-201ENST00000373298 SLC1A4P43007 532 aa11.14□□□□□ -0.63
ITM2A-201ENST00000373298 USP14P54578 494 aa11.14□□□□□ -0.63
ITM2A-201ENST00000373298 SREBF2Q12772 1141 aa11.14□□□□□ -0.63
ITM2A-201ENST00000373298 NOL8Q76FK4 1167 aaKnown RBP11.14□□□□□ -0.63
ITM2A-201ENST00000373298 FASTKD5Q7L8L6 764 aaKnown RBP11.14□□□□□ -0.63
ITM2A-201ENST00000373298 ZNF654Q8IZM8 581 aa11.14□□□□□ -0.63
ITM2A-201ENST00000373298 CMTR1Q8N1G2 835 aaKnown RBP11.14□□□□□ -0.63
ITM2A-201ENST00000373298 JMYQ8N9B5 988 aa11.14□□□□□ -0.63
ITM2A-201ENST00000373298 TMEM87BQ96K49 555 aa11.14□□□□□ -0.63
ITM2A-201ENST00000373298 UBA5Q9GZZ9 404 aa11.14□□□□□ -0.63
ITM2A-201ENST00000373298 GOPCQ9HD26 462 aa11.14□□□□□ -0.63
ITM2A-201ENST00000373298 WBP1LQ9NX94 342 aa11.14□□□□□ -0.63
ITM2A-201ENST00000373298 MAD2L2Q9UI95 211 aa11.14□□□□□ -0.63
ITM2A-201ENST00000373298 HPS5Q9UPZ3 1129 aa11.14□□□□□ -0.63
ITM2A-201ENST00000373298 CYP46A1Q9Y6A2 500 aa11.14□□□□□ -0.63
ITM2A-201ENST00000373298 ADGRA2Q96PE1 1338 aa11.14□□□□□ -0.63
ITM2A-201ENST00000373298 TMEM232C9JQI7 657 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 WDR46O15213 610 aaKnown RBP11.13□□□□□ -0.63
ITM2A-201ENST00000373298 PPFIA3O75145 1194 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 LARGE1O95461 756 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 BMP3P12645 472 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 PSMA5P28066 241 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 HOXA7P31268 230 aaPredicted RBP11.13□□□□□ -0.63
ITM2A-201ENST00000373298 LIFRP42702 1097 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 NEK4P51957 841 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 TAF1CQ15572 869 aaPredicted RBP11.13□□□□□ -0.63
ITM2A-201ENST00000373298 LPAR1Q92633 364 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 ATG4CQ96DT6 458 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 GMCL1Q96IK5 515 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 AGXT2Q9BYV1 514 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 SH2D4AQ9H788 454 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 PDRG1Q9NUG6 133 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 ISY1Q9ULR0 285 aaKnown RBP11.13□□□□□ -0.63
ITM2A-201ENST00000373298 CASP8AP2Q9UKL3 1982 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 WDR19Q8NEZ3 1342 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 KLF18A0A0U1RQI7 1052 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 ERICH2A1L162 156 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 SPDYE16A6NNV3 312 aaPredicted RBP11.13□□□□□ -0.63
ITM2A-201ENST00000373298 USP17L15C9J2P7 530 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 USP17L13C9JLJ4 530 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 USP17L11C9JVI0 530 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 USP17L18D6R9N7 530 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 USP17L22D6RA61 530 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 USP17L17D6RBQ6 530 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 USP17L19D6RCP7 530 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 USP17L20D6RJB6 530 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 CNMDO75829 334 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 FLOT1O75955 427 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 HMGB1P09429 215 aaKnown RBP11.13□□□□□ -0.63
ITM2A-201ENST00000373298 CDC27P30260 824 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 AK2P54819 239 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 INHBEP58166 350 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 ZNF543Q08ER8 600 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 USP17L24Q0WX57 530 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 SART3Q15020 963 aaKnown RBP11.13□□□□□ -0.63
ITM2A-201ENST00000373298 CCDC96Q2M329 555 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 Q3C1V9 767 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 APOA5Q6Q788 366 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 NFXL1Q6ZNB6 911 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 SGMS1Q86VZ5 419 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 MICU3Q86XE3 530 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 NUP133Q8WUM0 1156 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 FAM217BQ9NTX9 383 aaPredicted RBP11.13□□□□□ -0.63
ITM2A-201ENST00000373298 BTBD7Q9P203 1132 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 RBPJLQ9UBG7 517 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 CPA4Q9UI42 421 aa11.13□□□□□ -0.63
ITM2A-201ENST00000373298 A0A0G2JMZ2 1700 aa11.12□□□□□ -0.63
ITM2A-201ENST00000373298 CA12O43570 354 aa11.12□□□□□ -0.63
ITM2A-201ENST00000373298 CYTH3O43739 400 aa11.12□□□□□ -0.63
ITM2A-201ENST00000373298 PLEKHA8P1O95397 391 aa11.12□□□□□ -0.63
ITM2A-201ENST00000373298 CTGFP29279 349 aa11.12□□□□□ -0.63
ITM2A-201ENST00000373298 NT5C2P49902 561 aa11.12□□□□□ -0.63
ITM2A-201ENST00000373298 HERVK_113P62684 666 aa11.12□□□□□ -0.63
ITM2A-201ENST00000373298 IRX3P78415 501 aaPredicted RBP11.12□□□□□ -0.63
ITM2A-201ENST00000373298 LSM11P83369 360 aaKnown RBP eCLIP11.12□□□□□ -0.63
ITM2A-201ENST00000373298 CCDC178Q5BJE1 867 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms