RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 AGPAT5Q9NUQ2 364 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 LRP2BPQ9P2M1 347 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 ZC3H4Q9UPT8 1303 aaKnown RBP15.37■□□□□ 0.05
USP49-201ENST00000373006 AGPSO00116 658 aa15.36■□□□□ 0.05
USP49-201ENST00000373006 RPN1P04843 607 aaKnown RBP15.36■□□□□ 0.05
USP49-201ENST00000373006 VEGFAP15692 232 aaPredicted RBP15.36■□□□□ 0.05
USP49-201ENST00000373006 LIG3P49916 1009 aa15.36■□□□□ 0.05
USP49-201ENST00000373006 PDXDC2PQ6P474 469 aa15.36■□□□□ 0.05
USP49-201ENST00000373006 GIGYF2Q6Y7W6 1299 aaKnown RBP15.36■□□□□ 0.05
USP49-201ENST00000373006 MB21D1Q8N884 522 aa15.36■□□□□ 0.05
USP49-201ENST00000373006 KAT14Q9H8E8 782 aa15.36■□□□□ 0.05
USP49-201ENST00000373006 SPATA31A3Q5VYP0 1347 aa15.36■□□□□ 0.05
USP49-201ENST00000373006 CDHR2Q9BYE9 1310 aa15.36■□□□□ 0.05
USP49-201ENST00000373006 CCT5P48643 541 aa15.36■□□□□ 0.05
USP49-201ENST00000373006 KLK7P49862 253 aa15.36■□□□□ 0.05
USP49-201ENST00000373006 TRIM14Q14142 442 aa15.36■□□□□ 0.05
USP49-201ENST00000373006 GPIHBP1Q8IV16 184 aa15.36■□□□□ 0.05
USP49-201ENST00000373006 ENAHQ8N8S7 591 aaPredicted RBP15.36■□□□□ 0.05
USP49-201ENST00000373006 SEC23AQ15436 765 aa15.36■□□□□ 0.05
USP49-201ENST00000373006 ZNF658Q5TYW1 1059 aaPredicted RBP15.36■□□□□ 0.05
USP49-201ENST00000373006 ECM2O94769 699 aaPredicted RBP15.35■□□□□ 0.05
USP49-201ENST00000373006 MATR3P43243 847 aaKnown RBP eCLIP15.35■□□□□ 0.05
USP49-201ENST00000373006 EZH2Q15910 746 aaKnown RBP15.35■□□□□ 0.05
USP49-201ENST00000373006 CCNI2Q6ZMN8 369 aaPredicted RBP15.35■□□□□ 0.05
USP49-201ENST00000373006 NCAPGQ9BPX3 1015 aa15.35■□□□□ 0.05
USP49-201ENST00000373006 GEMIN8Q9NWZ8 242 aaKnown RBP15.35■□□□□ 0.05
USP49-201ENST00000373006 NID2Q14112 1375 aa15.35■□□□□ 0.05
USP49-201ENST00000373006 SOS2Q07890 1332 aaPredicted RBP15.35■□□□□ 0.05
USP49-201ENST00000373006 GTPBP6O43824 516 aaPredicted RBP15.35■□□□□ 0.05
USP49-201ENST00000373006 IDEP14735 1019 aa15.35■□□□□ 0.05
USP49-201ENST00000373006 ATP2C1P98194 919 aaPredicted RBP15.35■□□□□ 0.05
USP49-201ENST00000373006 FUT2Q10981 343 aa15.35■□□□□ 0.05
USP49-201ENST00000373006 NPY5RQ15761 445 aa15.35■□□□□ 0.05
USP49-201ENST00000373006 PAPD7Q5XG87 772 aaKnown RBP15.35■□□□□ 0.05
USP49-201ENST00000373006 ADGRA1Q86SQ6 560 aa15.35■□□□□ 0.05
USP49-201ENST00000373006 SMCR8Q8TEV9 937 aaPredicted RBP15.35■□□□□ 0.05
USP49-201ENST00000373006 HDAC7Q8WUI4 952 aa15.35■□□□□ 0.05
USP49-201ENST00000373006 ESR2Q92731 530 aa15.35■□□□□ 0.05
USP49-201ENST00000373006 RNF41Q9H4P4 317 aaPredicted RBP15.35■□□□□ 0.05
USP49-201ENST00000373006 BRMS1Q9HCU9 246 aa15.35■□□□□ 0.05
USP49-201ENST00000373006 ABCF2Q9UG63 623 aa15.35■□□□□ 0.05
USP49-201ENST00000373006 TRPM3Q9HCF6 1732 aaPredicted RBP15.35■□□□□ 0.05
USP49-201ENST00000373006 GOLGA6CA6NDK9 693 aa15.34■□□□□ 0.05
USP49-201ENST00000373006 B4DLN1 442 aa15.34■□□□□ 0.05
USP49-201ENST00000373006 GOLGA6DP0CG33 693 aa15.34■□□□□ 0.05
USP49-201ENST00000373006 IL2RBP14784 551 aa15.34■□□□□ 0.05
USP49-201ENST00000373006 IFIT1BQ5T764 474 aaKnown RBP15.34■□□□□ 0.05
USP49-201ENST00000373006 PSMB7Q99436 277 aa15.34■□□□□ 0.05
USP49-201ENST00000373006 GOLGA6AQ9NYA3 693 aa15.34■□□□□ 0.05
USP49-201ENST00000373006 KRT86O43790 486 aa15.34■□□□□ 0.05
USP49-201ENST00000373006 GUCY2CP25092 1073 aa15.34■□□□□ 0.05
USP49-201ENST00000373006 EIF5P55010 431 aaKnown RBP15.34■□□□□ 0.05
USP49-201ENST00000373006 RASSF8Q8NHQ8 419 aa15.34■□□□□ 0.05
USP49-201ENST00000373006 FAM76AQ8TAV0 307 aa15.34■□□□□ 0.05
USP49-201ENST00000373006 LRP6O75581 1613 aa15.34■□□□□ 0.05
USP49-201ENST00000373006 KCPQ6ZWJ8 1503 aa15.34■□□□□ 0.05
USP49-201ENST00000373006 GOLGA6BA6NDN3 693 aa15.34■□□□□ 0.05
USP49-201ENST00000373006 PRPF3O43395 683 aaKnown RBP15.34■□□□□ 0.05
USP49-201ENST00000373006 SLC5A1P13866 664 aa15.34■□□□□ 0.05
USP49-201ENST00000373006 TRIM21P19474 475 aaKnown RBP15.34■□□□□ 0.05
USP49-201ENST00000373006 FGFR2P21802 821 aa15.34■□□□□ 0.05
USP49-201ENST00000373006 CYP7A1P22680 504 aa15.34■□□□□ 0.05
USP49-201ENST00000373006 CATIPQ7Z7H3 387 aa15.34■□□□□ 0.05
USP49-201ENST00000373006 RRP36Q96EU6 259 aaKnown RBP15.34■□□□□ 0.05
USP49-201ENST00000373006 PCMTD1Q96MG8 357 aaPredicted RBP15.34■□□□□ 0.05
USP49-201ENST00000373006 ZSCAN10Q96SZ4 725 aaPredicted RBP15.34■□□□□ 0.05
USP49-201ENST00000373006 DNAJC7Q99615 494 aa15.34■□□□□ 0.05
USP49-201ENST00000373006 ZNF335Q9H4Z2 1342 aaPredicted RBP15.33■□□□□ 0.05
USP49-201ENST00000373006 EXOC5O00471 708 aa15.33■□□□□ 0.04
USP49-201ENST00000373006 MCM3P25205 808 aa15.33■□□□□ 0.04
USP49-201ENST00000373006 IRAK1P51617 712 aa15.33■□□□□ 0.04
USP49-201ENST00000373006 NLRP5P59047 1200 aa15.33■□□□□ 0.04
USP49-201ENST00000373006 SND1Q7KZF4 910 aaKnown RBP eCLIP15.33■□□□□ 0.04
USP49-201ENST00000373006 PP2D1A8MPX8 630 aa15.33■□□□□ 0.04
USP49-201ENST00000373006 H7C1D1 291 aa15.33■□□□□ 0.04
USP49-201ENST00000373006 BMP15O95972 392 aa15.33■□□□□ 0.04
USP49-201ENST00000373006 PDE6BP35913 854 aa15.33■□□□□ 0.04
USP49-201ENST00000373006 STAT6P42226 847 aa15.33■□□□□ 0.04
USP49-201ENST00000373006 KRT83P78385 493 aa15.33■□□□□ 0.04
USP49-201ENST00000373006 SLC7A5Q01650 507 aa15.33■□□□□ 0.04
USP49-201ENST00000373006 KRT26Q7Z3Y9 468 aa15.33■□□□□ 0.04
USP49-201ENST00000373006 TNFRSF25Q93038 417 aa15.33■□□□□ 0.04
USP49-201ENST00000373006 TRIM47Q96LD4 638 aa15.33■□□□□ 0.04
USP49-201ENST00000373006 NHEJ1Q9H9Q4 299 aaPredicted RBP15.33■□□□□ 0.04
USP49-201ENST00000373006 CAPN11Q9UMQ6 739 aa15.33■□□□□ 0.04
USP49-201ENST00000373006 LGALS16A8MUM7 142 aa15.32■□□□□ 0.04
USP49-201ENST00000373006 NMT2O60551 498 aa15.32■□□□□ 0.04
USP49-201ENST00000373006 GNAT2P19087 354 aa15.32■□□□□ 0.04
USP49-201ENST00000373006 TADA2BQ86TJ2 420 aa15.32■□□□□ 0.04
USP49-201ENST00000373006 EFCAB13Q8IY85 973 aa15.32■□□□□ 0.04
USP49-201ENST00000373006 EVX2Q03828 476 aa15.32■□□□□ 0.04
USP49-201ENST00000373006 CKAP4Q07065 602 aaKnown RBP15.32■□□□□ 0.04
USP49-201ENST00000373006 POLD4Q9HCU8 107 aa15.32■□□□□ 0.04
USP49-201ENST00000373006 SMARCAL1Q9NZC9 954 aa15.32■□□□□ 0.04
USP49-201ENST00000373006 DMGDHQ9UI17 866 aaKnown RBP15.32■□□□□ 0.04
USP49-201ENST00000373006 TARSL2A2RTX5 802 aaKnown RBP15.32■□□□□ 0.04
USP49-201ENST00000373006 PDE8AO60658 829 aa15.32■□□□□ 0.04
USP49-201ENST00000373006 IPO7O95373 1038 aaKnown RBP15.32■□□□□ 0.04
USP49-201ENST00000373006 CXCR5P32302 372 aa15.32■□□□□ 0.04
USP49-201ENST00000373006 CADPS2Q86UW7 1296 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms