RNA–Protein interactions for RNA: ENST00000367818.3

XCL1-201, Transcript of X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCL1, Length 1,367 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1-201ENST00000367818 VWCEQ96DN2 955 aa6.2□□□□□ -1.42
XCL1-201ENST00000367818 CEP44Q9C0F1 390 aa6.2□□□□□ -1.42
XCL1-201ENST00000367818 NIF3L1Q9GZT8 377 aa6.2□□□□□ -1.42
XCL1-201ENST00000367818 EBF1Q9UH73 591 aa6.2□□□□□ -1.42
XCL1-201ENST00000367818 EGFL7Q9UHF1 273 aa6.2□□□□□ -1.42
XCL1-201ENST00000367818 C9orf84Q5VXU9 1444 aa6.2□□□□□ -1.42
XCL1-201ENST00000367818 LMTK3Q96Q04 1460 aa6.2□□□□□ -1.42
XCL1-201ENST00000367818 CDC42BPAQ5VT25 1732 aa6.2□□□□□ -1.42
XCL1-201ENST00000367818 ZMYM4Q5VZL5 1548 aa6.19□□□□□ -1.42
XCL1-201ENST00000367818 KCNC1P48547 511 aa6.19□□□□□ -1.42
XCL1-201ENST00000367818 UBXN11Q5T124 520 aa6.19□□□□□ -1.42
XCL1-201ENST00000367818 PWWP2AQ96N64 755 aa6.19□□□□□ -1.42
XCL1-201ENST00000367818 CITED4Q96RK1 184 aa6.19□□□□□ -1.42
XCL1-201ENST00000367818 CFDP1Q9UEE9 299 aaPredicted RBP6.19□□□□□ -1.42
XCL1-201ENST00000367818 MTUS2Q5JR59 1369 aa6.19□□□□□ -1.42
XCL1-201ENST00000367818 CCNB3Q8WWL7 1395 aa6.19□□□□□ -1.42
XCL1-201ENST00000367818 CCDC18Q5T9S5 1454 aa6.19□□□□□ -1.42
XCL1-201ENST00000367818 ZNF518AQ6AHZ1 1483 aa6.19□□□□□ -1.42
XCL1-201ENST00000367818 TMEM88BA6NKF7 163 aa6.18□□□□□ -1.42
XCL1-201ENST00000367818 H3BRB1 525 aa6.18□□□□□ -1.42
XCL1-201ENST00000367818 PLCB3Q01970 1234 aa6.18□□□□□ -1.42
XCL1-201ENST00000367818 GGT6Q6P531 493 aa6.18□□□□□ -1.42
XCL1-201ENST00000367818 C3orf58Q8NDZ4 430 aa6.18□□□□□ -1.42
XCL1-201ENST00000367818 TUT1Q9H6E5 874 aaKnown RBP6.18□□□□□ -1.42
XCL1-201ENST00000367818 SPAG9O60271 1321 aaKnown RBP6.18□□□□□ -1.42
XCL1-201ENST00000367818 MAGI2Q86UL8 1455 aa6.18□□□□□ -1.42
XCL1-201ENST00000367818 DIP2CQ9Y2E4 1556 aa6.18□□□□□ -1.42
XCL1-201ENST00000367818 PREX2Q70Z35 1606 aa6.18□□□□□ -1.42
XCL1-201ENST00000367818 ABCA6Q8N139 1617 aa6.18□□□□□ -1.42
XCL1-201ENST00000367818 ITSN2Q9NZM3 1697 aa6.18□□□□□ -1.42
XCL1-201ENST00000367818 NOTOA8MTQ0 251 aa6.18□□□□□ -1.42
XCL1-201ENST00000367818 EFEMP2O95967 443 aa6.18□□□□□ -1.42
XCL1-201ENST00000367818 YBX1P67809 324 aaKnown RBP6.18□□□□□ -1.42
XCL1-201ENST00000367818 TEKQ02763 1124 aa6.18□□□□□ -1.42
XCL1-201ENST00000367818 WIPI1Q5MNZ9 446 aaPredicted RBP6.18□□□□□ -1.42
XCL1-201ENST00000367818 PHLDB3Q6NSJ2 640 aa6.18□□□□□ -1.42
XCL1-201ENST00000367818 IGDCC3Q8IVU1 814 aa6.18□□□□□ -1.42
XCL1-201ENST00000367818 DTWD2Q8NBA8 298 aa6.18□□□□□ -1.42
XCL1-201ENST00000367818 LINC01599Q8WXQ3 324 aa6.18□□□□□ -1.42
XCL1-201ENST00000367818 CRTAC1Q9NQ79 661 aa6.18□□□□□ -1.42
XCL1-201ENST00000367818 CYP8B1Q9UNU6 501 aa6.18□□□□□ -1.42
XCL1-201ENST00000367818 SUPT6HQ7KZ85 1726 aaKnown RBP6.18□□□□□ -1.42
XCL1-201ENST00000367818 FYCO1Q9BQS8 1478 aa6.17□□□□□ -1.42
XCL1-201ENST00000367818 SYCP2Q9BX26 1530 aa6.17□□□□□ -1.42
XCL1-201ENST00000367818 GPATCH8Q9UKJ3 1502 aaKnown RBP6.17□□□□□ -1.42
XCL1-201ENST00000367818 SAMD9LQ8IVG5 1584 aa6.17□□□□□ -1.42
XCL1-201ENST00000367818 GRK4P32298 578 aa6.17□□□□□ -1.42
XCL1-201ENST00000367818 ARHGAP4P98171 946 aa6.17□□□□□ -1.42
XCL1-201ENST00000367818 NXPE4Q6UWF7 544 aa6.17□□□□□ -1.42
XCL1-201ENST00000367818 GLYCTKQ8IVS8 523 aa6.17□□□□□ -1.42
XCL1-201ENST00000367818 DNAJB8Q8NHS0 232 aa6.17□□□□□ -1.42
XCL1-201ENST00000367818 FBXO41Q8TF61 875 aa6.17□□□□□ -1.42
XCL1-201ENST00000367818 DPH2Q9BQC3 489 aaPredicted RBP6.17□□□□□ -1.42
XCL1-201ENST00000367818 GTF3C3Q9Y5Q9 886 aa6.17□□□□□ -1.42
XCL1-201ENST00000367818 SNCAIPQ9Y6H5 919 aa6.17□□□□□ -1.42
XCL1-201ENST00000367818 CEP162Q5TB80 1403 aa6.16□□□□□ -1.42
XCL1-201ENST00000367818 ABCC1P33527 1531 aa6.16□□□□□ -1.42
XCL1-201ENST00000367818 KIDINS220Q9ULH0 1771 aa6.16□□□□□ -1.42
XCL1-201ENST00000367818 C1QTNF3-AMACRE9PGA6 284 aa6.16□□□□□ -1.42
XCL1-201ENST00000367818 ABLIM1O14639 778 aa6.16□□□□□ -1.42
XCL1-201ENST00000367818 SLURP1P55000 103 aa6.16□□□□□ -1.42
XCL1-201ENST00000367818 PTPN11Q06124 597 aaPredicted RBP6.16□□□□□ -1.42
XCL1-201ENST00000367818 MRPL41Q8IXM3 137 aaKnown RBP6.16□□□□□ -1.42
XCL1-201ENST00000367818 G6PC3Q9BUM1 346 aa6.16□□□□□ -1.42
XCL1-201ENST00000367818 SCAND2PQ9GZW5 306 aaPredicted RBP6.16□□□□□ -1.42
XCL1-201ENST00000367818 SMPD4Q9NXE4 827 aa6.16□□□□□ -1.42
XCL1-201ENST00000367818 KCNH3Q9ULD8 1083 aa6.16□□□□□ -1.42
XCL1-201ENST00000367818 PPM1HQ9ULR3 514 aa6.16□□□□□ -1.42
XCL1-201ENST00000367818 KDM5CP41229 1560 aa6.16□□□□□ -1.42
XCL1-201ENST00000367818 FFAR3O14843 346 aa6.15□□□□□ -1.43
XCL1-201ENST00000367818 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.15□□□□□ -1.43
XCL1-201ENST00000367818 GAL3ST3Q96A11 431 aa6.15□□□□□ -1.43
XCL1-201ENST00000367818 ALKBH8Q96BT7 664 aaKnown RBP6.15□□□□□ -1.43
XCL1-201ENST00000367818 C3P01024 1663 aa6.14□□□□□ -1.43
XCL1-201ENST00000367818 MLH3Q9UHC1 1453 aa6.14□□□□□ -1.43
XCL1-201ENST00000367818 FBXO24O75426 580 aa6.14□□□□□ -1.43
XCL1-201ENST00000367818 USP2O75604 605 aaPredicted RBP6.14□□□□□ -1.43
XCL1-201ENST00000367818 CAP1Q01518 475 aa6.14□□□□□ -1.43
XCL1-201ENST00000367818 PCNX4Q63HM2 1172 aa6.14□□□□□ -1.43
XCL1-201ENST00000367818 TMC1Q8TDI8 760 aa6.14□□□□□ -1.43
XCL1-201ENST00000367818 MRIQ9BWK5 157 aa6.14□□□□□ -1.43
XCL1-201ENST00000367818 SLITRK6Q9H5Y7 841 aa6.14□□□□□ -1.43
XCL1-201ENST00000367818 USP40Q9NVE5 1235 aa6.14□□□□□ -1.43
XCL1-201ENST00000367818 UHRF1BP1Q6BDS2 1440 aa6.13□□□□□ -1.43
XCL1-201ENST00000367818 NRDCO43847 1150 aa6.13□□□□□ -1.43
XCL1-201ENST00000367818 GSTT1P30711 240 aa6.13□□□□□ -1.43
XCL1-201ENST00000367818 LDHDQ86WU2 507 aa6.13□□□□□ -1.43
XCL1-201ENST00000367818 TJP2Q9UDY2 1190 aa6.13□□□□□ -1.43
XCL1-201ENST00000367818 PREX1Q8TCU6 1659 aa6.13□□□□□ -1.43
XCL1-201ENST00000367818 TIAM1Q13009 1591 aa6.13□□□□□ -1.43
XCL1-201ENST00000367818 ATP7AQ04656 1500 aa6.12□□□□□ -1.43
XCL1-201ENST00000367818 ZMYM3Q14202 1370 aa6.12□□□□□ -1.43
XCL1-201ENST00000367818 KIF3BO15066 747 aa6.12□□□□□ -1.43
XCL1-201ENST00000367818 C6P13671 934 aa6.12□□□□□ -1.43
XCL1-201ENST00000367818 SDHBP21912 280 aa6.12□□□□□ -1.43
XCL1-201ENST00000367818 GDF5P43026 501 aa6.12□□□□□ -1.43
XCL1-201ENST00000367818 CDK8P49336 464 aa6.12□□□□□ -1.43
XCL1-201ENST00000367818 FERMT3Q86UX7 667 aa6.12□□□□□ -1.43
XCL1-201ENST00000367818 TMEM87BQ96K49 555 aa6.12□□□□□ -1.43
XCL1-201ENST00000367818 DMRTB1Q96MA1 342 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms