RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 TSPY3P0CV98 308 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 TSPY8P0CW00 308 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 MARCKSP29966 332 aaPredicted RBP7.21□□□□□ -1.26
VPS13B-202ENST00000357162 NOP14P78316 857 aaKnown RBP7.21□□□□□ -1.26
VPS13B-202ENST00000357162 PLCB3Q01970 1234 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 SMAPO00193 183 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 ASIC2Q16515 512 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 CCDC105Q8IYK2 499 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 REXO1Q8N1G1 1221 aaKnown RBP7.21□□□□□ -1.26
VPS13B-202ENST00000357162 ARMC2Q8NEN0 867 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 PDE11AQ9HCR9 933 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 CABP5Q9NP86 173 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 BAIAP2L1Q9UHR4 511 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 DENND4BO75064 1496 aaPredicted RBP7.21□□□□□ -1.26
VPS13B-202ENST00000357162 AATKQ6ZMQ8 1374 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 ARL6IP4Q66PJ3 421 aaKnown RBP7.2□□□□□ -1.26
VPS13B-202ENST00000357162 CLCN6P51797 869 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 KRR1Q13601 381 aaKnown RBP7.2□□□□□ -1.26
VPS13B-202ENST00000357162 IFNL2Q8IZJ0 200 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 DONSONQ9NYP3 566 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 ABCC12Q96J65 1359 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 GSTA2P09210 222 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 P4HA1P13674 534 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 ILF2Q12905 390 aaKnown RBP7.2□□□□□ -1.26
VPS13B-202ENST00000357162 ZNF579Q8NAF0 562 aaKnown RBP7.2□□□□□ -1.26
VPS13B-202ENST00000357162 TACC3Q9Y6A5 838 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 MIF4GDA9UHW6 222 aaKnown RBP7.2□□□□□ -1.26
VPS13B-202ENST00000357162 ZBTB7BO15156 539 aaPredicted RBP7.2□□□□□ -1.26
VPS13B-202ENST00000357162 KRT5P13647 590 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 ATP5JP18859 108 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 MORC4Q8TE76 937 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 KIF9Q9HAQ2 790 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.2□□□□□ -1.26
VPS13B-202ENST00000357162 HOOK2Q96ED9 719 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 XPO4Q9C0E2 1151 aaKnown RBP7.2□□□□□ -1.26
VPS13B-202ENST00000357162 AKAP4Q5JQC9 854 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 DDAH1O94760 285 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 TSC22D3Q99576 134 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 CDCA7Q9BWT1 371 aaPredicted RBP7.2□□□□□ -1.26
VPS13B-202ENST00000357162 ADAMTS12P58397 1594 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 ZPR1O75312 459 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 KLHL30Q0D2K2 578 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 THOC1Q96FV9 657 aaKnown RBP7.2□□□□□ -1.26
VPS13B-202ENST00000357162 ZSWIM6Q9HCJ5 1215 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 NUP153P49790 1475 aaKnown RBP7.2□□□□□ -1.26
VPS13B-202ENST00000357162 LONRF2Q1L5Z9 754 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 CCDC125Q86Z20 511 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 TRIM15Q9C019 465 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 MRPS35P82673 323 aaKnown RBP7.2□□□□□ -1.26
VPS13B-202ENST00000357162 PSMD2Q13200 908 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 PROM2Q8N271 834 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 DHX58Q96C10 678 aa7.2□□□□□ -1.26
VPS13B-202ENST00000357162 GCFC2P16383 781 aaKnown RBP7.19□□□□□ -1.26
VPS13B-202ENST00000357162 PSMC4P43686 418 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 E7ENQ6 273 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 GOLGA8TH3BQL2 631 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 GOLGA8HP0CJ92 632 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 LRRC63Q05C16 580 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 ELOA2Q8IYF1 753 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-202ENST00000357162 HELBQ8NG08 1087 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-202ENST00000357162 MTRQ99707 1265 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 NDUFA13Q9P0J0 144 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 CD109Q6YHK3 1445 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 DYTNA2CJ06 578 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 NR1D1P20393 614 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 TMED1Q13445 227 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 CCDC92Q53HC0 331 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-202ENST00000357162 HEATR3Q7Z4Q2 680 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 SLFN12Q8IYM2 578 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 ANKIB1Q9P2G1 1089 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 MAP3K7O43318 606 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 SCP2P22307 547 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 PRR16Q569H4 304 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 CCT6BQ92526 530 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 FAM210AQ96ND0 272 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 FAM204AQ9H8W3 233 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 USP40Q9NVE5 1235 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 MIS18AQ9NYP9 233 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 ASIC3Q9UHC3 531 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 CPSF1Q10570 1443 aaKnown RBP7.19□□□□□ -1.26
VPS13B-202ENST00000357162 SERPINB10P48595 397 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 BEND3Q5T5X7 828 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 ENOX1Q8TC92 643 aaKnown RBP7.19□□□□□ -1.26
VPS13B-202ENST00000357162 APPBP2Q92624 585 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 CARD10Q9BWT7 1032 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 PACSIN2Q9UNF0 486 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-202ENST00000357162 GOLGA8MH3BSY2 632 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 KRT3P12035 628 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 PUF60Q9UHX1 559 aaKnown RBP7.19□□□□□ -1.26
VPS13B-202ENST00000357162 MAST3O60307 1309 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 SYNGAP1Q96PV0 1343 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 CITO14578 2027 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 PODXLO00592 558 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 EEF2P13639 858 aaKnown RBP7.19□□□□□ -1.26
VPS13B-202ENST00000357162 LONP1P36776 959 aaKnown RBP7.19□□□□□ -1.26
VPS13B-202ENST00000357162 PUM3Q15397 648 aaKnown RBP7.19□□□□□ -1.26
VPS13B-202ENST00000357162 TMEM63CQ9P1W3 806 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 PDP2Q9P2J9 529 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 TBCCQ15814 346 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 TMEM60Q9H2L4 133 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms