RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 COL16A1Q07092 1604 aaPredicted RBP19.99■□□□□ 0.79
VHL-202ENST00000345392 IRF2BP1Q8IU81 584 aa19.98■□□□□ 0.79
VHL-202ENST00000345392 PPM1EQ8WY54 764 aa19.98■□□□□ 0.79
VHL-202ENST00000345392 LPIN2Q92539 896 aa19.98■□□□□ 0.79
VHL-202ENST00000345392 JAKMIP2Q96AA8 810 aa19.98■□□□□ 0.79
VHL-202ENST00000345392 DUSP10Q9Y6W6 482 aa19.98■□□□□ 0.79
VHL-202ENST00000345392 AGPSO00116 658 aa19.98■□□□□ 0.79
VHL-202ENST00000345392 PARP1P09874 1014 aaKnown RBP19.98■□□□□ 0.79
VHL-202ENST00000345392 DNAJC21Q5F1R6 531 aaKnown RBP19.98■□□□□ 0.79
VHL-202ENST00000345392 PDXDC2PQ6P474 469 aa19.98■□□□□ 0.79
VHL-202ENST00000345392 CAGE1Q8TC20 777 aa19.98■□□□□ 0.79
VHL-202ENST00000345392 CRACR2AQ9BSW2 395 aa19.98■□□□□ 0.79
VHL-202ENST00000345392 LACRTQ9GZZ8 138 aa19.98■□□□□ 0.79
VHL-202ENST00000345392 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.98■□□□□ 0.79
VHL-202ENST00000345392 RCCD1A6NED2 376 aa19.97■□□□□ 0.79
VHL-202ENST00000345392 PDE2AO00408 941 aaPredicted RBP19.97■□□□□ 0.79
VHL-202ENST00000345392 IL17AQ16552 155 aa19.97■□□□□ 0.79
VHL-202ENST00000345392 KIAA1328Q86T90 577 aa19.97■□□□□ 0.79
VHL-202ENST00000345392 SELENOOQ9BVL4 669 aa19.97■□□□□ 0.79
VHL-202ENST00000345392 CHD4Q14839 1912 aa19.97■□□□□ 0.79
VHL-202ENST00000345392 FGFR2P21802 821 aa19.97■□□□□ 0.79
VHL-202ENST00000345392 MCM7P33993 719 aa19.97■□□□□ 0.79
VHL-202ENST00000345392 PMS1P54277 932 aaKnown RBP19.97■□□□□ 0.79
VHL-202ENST00000345392 PPARAQ07869 468 aa19.97■□□□□ 0.79
VHL-202ENST00000345392 MB21D1Q8N884 522 aa19.97■□□□□ 0.79
VHL-202ENST00000345392 EHD4Q9H223 541 aa19.97■□□□□ 0.79
VHL-202ENST00000345392 SEC23AQ15436 765 aa19.96■□□□□ 0.79
VHL-202ENST00000345392 ZNF658Q5TYW1 1059 aaPredicted RBP19.96■□□□□ 0.79
VHL-202ENST00000345392 SUSD4Q5VX71 490 aa19.96■□□□□ 0.79
VHL-202ENST00000345392 PAPD7Q5XG87 772 aaKnown RBP19.96■□□□□ 0.79
VHL-202ENST00000345392 BCL9LQ86UU0 1499 aa19.96■□□□□ 0.79
VHL-202ENST00000345392 ADAMTS3O15072 1205 aa19.96■□□□□ 0.79
VHL-202ENST00000345392 RPN1P04843 607 aaKnown RBP19.96■□□□□ 0.79
VHL-202ENST00000345392 MRPS25P82663 173 aaKnown RBP19.96■□□□□ 0.79
VHL-202ENST00000345392 ATP2C1P98194 919 aaPredicted RBP19.96■□□□□ 0.79
VHL-202ENST00000345392 C2orf54Q08AI8 447 aa19.96■□□□□ 0.79
VHL-202ENST00000345392 FUT2Q10981 343 aa19.96■□□□□ 0.79
VHL-202ENST00000345392 PIK3AP1Q6ZUJ8 805 aa19.96■□□□□ 0.79
VHL-202ENST00000345392 KAT14Q9H8E8 782 aa19.96■□□□□ 0.79
VHL-202ENST00000345392 AGPAT5Q9NUQ2 364 aa19.96■□□□□ 0.79
VHL-202ENST00000345392 SLIT2O94813 1529 aa19.95■□□□□ 0.78
VHL-202ENST00000345392 GTPBP6O43824 516 aaPredicted RBP19.95■□□□□ 0.78
VHL-202ENST00000345392 NPY5RQ15761 445 aa19.95■□□□□ 0.78
VHL-202ENST00000345392 TSR1Q2NL82 804 aaKnown RBP19.95■□□□□ 0.78
VHL-202ENST00000345392 CCNI2Q6ZMN8 369 aaPredicted RBP19.95■□□□□ 0.78
VHL-202ENST00000345392 ADGRA1Q86SQ6 560 aa19.95■□□□□ 0.78
VHL-202ENST00000345392 ENAHQ8N8S7 591 aaPredicted RBP19.95■□□□□ 0.78
VHL-202ENST00000345392 DRC1Q96MC2 740 aa19.95■□□□□ 0.78
VHL-202ENST00000345392 JADE2Q9NQC1 790 aa19.95■□□□□ 0.78
VHL-202ENST00000345392 MYH6P13533 1939 aa19.95■□□□□ 0.78
VHL-202ENST00000345392 SLC5A1P13866 664 aa19.95■□□□□ 0.78
VHL-202ENST00000345392 MCM3P25205 808 aa19.95■□□□□ 0.78
VHL-202ENST00000345392 MICALL1Q8N3F8 863 aa19.95■□□□□ 0.78
VHL-202ENST00000345392 DNAJC7Q99615 494 aa19.95■□□□□ 0.78
VHL-202ENST00000345392 CYP2D7A0A087X1C5 515 aa19.94■□□□□ 0.78
VHL-202ENST00000345392 MACROD2A1Z1Q3 448 aa19.94■□□□□ 0.78
VHL-202ENST00000345392 CCT5P48643 541 aa19.94■□□□□ 0.78
VHL-202ENST00000345392 CYP27A1Q02318 531 aa19.94■□□□□ 0.78
VHL-202ENST00000345392 TNFRSF25Q93038 417 aa19.94■□□□□ 0.78
VHL-202ENST00000345392 RNF41Q9H4P4 317 aaPredicted RBP19.94■□□□□ 0.78
VHL-202ENST00000345392 PRPF3O43395 683 aaKnown RBP19.94■□□□□ 0.78
VHL-202ENST00000345392 BMP15O95972 392 aa19.94■□□□□ 0.78
VHL-202ENST00000345392 KLK7P49862 253 aa19.94■□□□□ 0.78
VHL-202ENST00000345392 IRX3P78415 501 aaPredicted RBP19.94■□□□□ 0.78
VHL-202ENST00000345392 FAM76AQ8TAV0 307 aa19.94■□□□□ 0.78
VHL-202ENST00000345392 BRMS1Q9HCU9 246 aa19.94■□□□□ 0.78
VHL-202ENST00000345392 ABCF2Q9UG63 623 aa19.94■□□□□ 0.78
VHL-202ENST00000345392 MYH3P11055 1940 aa19.94■□□□□ 0.78
VHL-202ENST00000345392 TARSL2A2RTX5 802 aaKnown RBP19.93■□□□□ 0.78
VHL-202ENST00000345392 GOLGA6CA6NDK9 693 aa19.93■□□□□ 0.78
VHL-202ENST00000345392 GOLGA6DP0CG33 693 aa19.93■□□□□ 0.78
VHL-202ENST00000345392 VEGFAP15692 232 aaPredicted RBP19.93■□□□□ 0.78
VHL-202ENST00000345392 TTC19Q6DKK2 380 aaPredicted RBP19.93■□□□□ 0.78
VHL-202ENST00000345392 EFCAB13Q8IY85 973 aa19.93■□□□□ 0.78
VHL-202ENST00000345392 GOLGA6AQ9NYA3 693 aa19.93■□□□□ 0.78
VHL-202ENST00000345392 LRP2BPQ9P2M1 347 aa19.93■□□□□ 0.78
VHL-202ENST00000345392 KRT86O43790 486 aa19.93■□□□□ 0.78
VHL-202ENST00000345392 EZH2Q15910 746 aaKnown RBP19.93■□□□□ 0.78
VHL-202ENST00000345392 ESR2Q92731 530 aa19.93■□□□□ 0.78
VHL-202ENST00000345392 CAPN11Q9UMQ6 739 aa19.93■□□□□ 0.78
VHL-202ENST00000345392 GOLGA6BA6NDN3 693 aa19.92■□□□□ 0.78
VHL-202ENST00000345392 B4DLN1 442 aa19.92■□□□□ 0.78
VHL-202ENST00000345392 H7C1D1 291 aa19.92■□□□□ 0.78
VHL-202ENST00000345392 EXOC5O00471 708 aa19.92■□□□□ 0.78
VHL-202ENST00000345392 IDEP14735 1019 aa19.92■□□□□ 0.78
VHL-202ENST00000345392 GNAT2P19087 354 aa19.92■□□□□ 0.78
VHL-202ENST00000345392 EVX2Q03828 476 aa19.92■□□□□ 0.78
VHL-202ENST00000345392 IFIT1BQ5T764 474 aaKnown RBP19.92■□□□□ 0.78
VHL-202ENST00000345392 TADA2BQ86TJ2 420 aa19.92■□□□□ 0.78
VHL-202ENST00000345392 HDAC7Q8WUI4 952 aa19.92■□□□□ 0.78
VHL-202ENST00000345392 LGALS16A8MUM7 142 aa19.92■□□□□ 0.78
VHL-202ENST00000345392 IRAK1P51617 712 aa19.92■□□□□ 0.78
VHL-202ENST00000345392 RCAN1P53805 252 aa19.92■□□□□ 0.78
VHL-202ENST00000345392 CKAP4Q07065 602 aaKnown RBP19.92■□□□□ 0.78
VHL-202ENST00000345392 ZNF507Q8TCN5 953 aa19.92■□□□□ 0.78
VHL-202ENST00000345392 SMCR8Q8TEV9 937 aaPredicted RBP19.92■□□□□ 0.78
VHL-202ENST00000345392 RRP36Q96EU6 259 aaKnown RBP19.92■□□□□ 0.78
VHL-202ENST00000345392 ZSCAN10Q96SZ4 725 aaPredicted RBP19.92■□□□□ 0.78
VHL-202ENST00000345392 PLIN2Q99541 437 aa19.92■□□□□ 0.78
VHL-202ENST00000345392 MROH5Q6ZUA9 1318 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms