RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 MYSM1Q5VVJ2 828 aa16.55■□□□□ 0.24
UBE3B-202ENST00000342494 RSPH3Q86UC2 560 aa16.55■□□□□ 0.24
UBE3B-202ENST00000342494 MAIP1Q8WWC4 291 aa16.55■□□□□ 0.24
UBE3B-202ENST00000342494 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.55■□□□□ 0.24
UBE3B-202ENST00000342494 PHKA1P46020 1223 aa16.55■□□□□ 0.24
UBE3B-202ENST00000342494 LSM14BQ9BX40 385 aaKnown RBP16.55■□□□□ 0.24
UBE3B-202ENST00000342494 BBOX1O75936 387 aa16.54■□□□□ 0.24
UBE3B-202ENST00000342494 FOSP01100 380 aaPredicted RBP16.54■□□□□ 0.24
UBE3B-202ENST00000342494 HSPD1P10809 573 aaKnown RBP16.54■□□□□ 0.24
UBE3B-202ENST00000342494 KRT81Q14533 505 aa16.54■□□□□ 0.24
UBE3B-202ENST00000342494 KLHL7Q8IXQ5 586 aa16.54■□□□□ 0.24
UBE3B-202ENST00000342494 IFT20Q8IY31 132 aa16.54■□□□□ 0.24
UBE3B-202ENST00000342494 GTF3C6Q969F1 213 aa16.54■□□□□ 0.24
UBE3B-202ENST00000342494 A0A0D9SFI3 127 aa16.54■□□□□ 0.24
UBE3B-202ENST00000342494 TUBB2AQ13885 445 aa16.54■□□□□ 0.24
UBE3B-202ENST00000342494 PRPF31Q8WWY3 499 aaKnown RBP16.54■□□□□ 0.24
UBE3B-202ENST00000342494 TUBB2BQ9BVA1 445 aa16.54■□□□□ 0.24
UBE3B-202ENST00000342494 AMNQ9BXJ7 453 aa16.54■□□□□ 0.24
UBE3B-202ENST00000342494 SPDYE16A6NNV3 312 aaPredicted RBP16.54■□□□□ 0.24
UBE3B-202ENST00000342494 SPDYE2Q495Y8 402 aa16.54■□□□□ 0.24
UBE3B-202ENST00000342494 CC2D2BQ6DHV5 1058 aa16.54■□□□□ 0.24
UBE3B-202ENST00000342494 SWAP70Q9UH65 585 aa16.54■□□□□ 0.24
UBE3B-202ENST00000342494 ATF5Q9Y2D1 282 aaPredicted RBP16.54■□□□□ 0.24
UBE3B-202ENST00000342494 NUB1Q9Y5A7 615 aa16.54■□□□□ 0.24
UBE3B-202ENST00000342494 DLATP10515 647 aaKnown RBP16.54■□□□□ 0.24
UBE3B-202ENST00000342494 TFDP1Q14186 410 aa16.54■□□□□ 0.24
UBE3B-202ENST00000342494 TYW1BQ6NUM6 668 aa16.54■□□□□ 0.24
UBE3B-202ENST00000342494 U2AF1L4Q8WU68 220 aaKnown RBP16.54■□□□□ 0.24
UBE3B-202ENST00000342494 COL4A3BPQ9Y5P4 624 aa16.54■□□□□ 0.24
UBE3B-202ENST00000342494 N4BP1O75113 896 aaKnown RBP16.53■□□□□ 0.24
UBE3B-202ENST00000342494 CIB2O75838 187 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 MAN1A1P33908 653 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 KIF11P52732 1056 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 ARMCX5Q6P1M9 558 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 PSMB7Q99436 277 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 PANK4Q9NVE7 773 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 ANKFY1Q9P2R3 1169 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.53■□□□□ 0.24
UBE3B-202ENST00000342494 PTPRTO14522 1441 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 GOLGA6CA6NDK9 693 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 GOLGA6BA6NDN3 693 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 GOLGA6DP0CG33 693 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 IQCDQ96DY2 449 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 APOL6Q9BWW8 343 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 GOLGA6AQ9NYA3 693 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.53■□□□□ 0.24
UBE3B-202ENST00000342494 PCP11498 1178 aaKnown RBP16.53■□□□□ 0.24
UBE3B-202ENST00000342494 PNOCQ13519 176 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 ARMCX3Q9UH62 379 aaPredicted RBP16.53■□□□□ 0.24
UBE3B-202ENST00000342494 TACC3Q9Y6A5 838 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 ZMYM6O95789 1325 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 FAM170AA1A519 330 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 CCDC93Q567U6 631 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 CBX8Q9HC52 389 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 NEO1Q92859 1461 aa16.53■□□□□ 0.24
UBE3B-202ENST00000342494 NOL3O60936 208 aaKnown RBP16.52■□□□□ 0.24
UBE3B-202ENST00000342494 STAM2O75886 525 aa16.52■□□□□ 0.24
UBE3B-202ENST00000342494 FGAP02671 866 aa16.52■□□□□ 0.24
UBE3B-202ENST00000342494 ADD1P35611 737 aaKnown RBP16.52■□□□□ 0.24
UBE3B-202ENST00000342494 MIS12Q9H081 205 aa16.52■□□□□ 0.24
UBE3B-202ENST00000342494 TSKSQ9UJT2 592 aa16.52■□□□□ 0.24
UBE3B-202ENST00000342494 KIF24Q5T7B8 1368 aa16.52■□□□□ 0.24
UBE3B-202ENST00000342494 UBE3CQ15386 1083 aa16.52■□□□□ 0.24
UBE3B-202ENST00000342494 GPATCH4Q5T3I0 446 aaKnown RBP16.52■□□□□ 0.24
UBE3B-202ENST00000342494 ZNF277Q9NRM2 450 aaPredicted RBP16.52■□□□□ 0.24
UBE3B-202ENST00000342494 ADD3Q9UEY8 706 aaKnown RBP16.52■□□□□ 0.24
UBE3B-202ENST00000342494 ABT1Q9ULW3 272 aaKnown RBP16.52■□□□□ 0.24
UBE3B-202ENST00000342494 MLH3Q9UHC1 1453 aa16.52■□□□□ 0.24
UBE3B-202ENST00000342494 RAD17O75943 681 aa16.52■□□□□ 0.24
UBE3B-202ENST00000342494 HS1BP3Q53T59 392 aa16.52■□□□□ 0.24
UBE3B-202ENST00000342494 RSAD2Q8WXG1 361 aa16.52■□□□□ 0.24
UBE3B-202ENST00000342494 SLF1Q9BQI6 1058 aa16.52■□□□□ 0.24
UBE3B-202ENST00000342494 HADHQ16836 314 aaKnown RBP16.52■□□□□ 0.23
UBE3B-202ENST00000342494 CCDC127Q96BQ5 260 aa16.52■□□□□ 0.23
UBE3B-202ENST00000342494 CCDC94Q9BW85 323 aaPredicted RBP16.52■□□□□ 0.23
UBE3B-202ENST00000342494 ME3Q16798 604 aa16.52■□□□□ 0.23
UBE3B-202ENST00000342494 IFIH1Q9BYX4 1025 aaKnown RBP16.52■□□□□ 0.23
UBE3B-202ENST00000342494 CACYBPQ9HB71 228 aaKnown RBP16.52■□□□□ 0.23
UBE3B-202ENST00000342494 XPOTO43592 962 aaKnown RBP16.51■□□□□ 0.23
UBE3B-202ENST00000342494 CYP4A11Q02928 519 aa16.51■□□□□ 0.23
UBE3B-202ENST00000342494 ITKQ08881 620 aa16.51■□□□□ 0.23
UBE3B-202ENST00000342494 RAB20Q9NX57 234 aa16.51■□□□□ 0.23
UBE3B-202ENST00000342494 FEZ2Q9UHY8 353 aaPredicted RBP16.51■□□□□ 0.23
UBE3B-202ENST00000342494 PZPP20742 1482 aa16.51■□□□□ 0.23
UBE3B-202ENST00000342494 NPHP4O75161 1426 aaPredicted RBP16.51■□□□□ 0.23
UBE3B-202ENST00000342494 MED23Q9ULK4 1368 aa16.51■□□□□ 0.23
UBE3B-202ENST00000342494 ABCB4P21439 1286 aa16.51■□□□□ 0.23
UBE3B-202ENST00000342494 ERFEQ4G0M1 354 aa16.51■□□□□ 0.23
UBE3B-202ENST00000342494 DALRD3Q5D0E6 543 aaKnown RBP16.51■□□□□ 0.23
UBE3B-202ENST00000342494 HHATQ5VTY9 493 aa16.51■□□□□ 0.23
UBE3B-202ENST00000342494 PDZD4Q76G19 769 aaPredicted RBP16.51■□□□□ 0.23
UBE3B-202ENST00000342494 SDCCAG8Q86SQ7 713 aaPredicted RBP16.51■□□□□ 0.23
UBE3B-202ENST00000342494 LRFN2Q9ULH4 789 aa16.51■□□□□ 0.23
UBE3B-202ENST00000342494 TLR3O15455 904 aaKnown RBP16.51■□□□□ 0.23
UBE3B-202ENST00000342494 STMN2Q93045 179 aa16.51■□□□□ 0.23
UBE3B-202ENST00000342494 SEPT9Q9UHD8 586 aaPredicted RBP16.51■□□□□ 0.23
UBE3B-202ENST00000342494 AKT3Q9Y243 479 aa16.51■□□□□ 0.23
UBE3B-202ENST00000342494 KCNQ4P56696 695 aa16.51■□□□□ 0.23
UBE3B-202ENST00000342494 CFAP221Q4G0U5 840 aa16.51■□□□□ 0.23
UBE3B-202ENST00000342494 CROCCP2Q86T23 111 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms