RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 PALM3A6NDB9 673 aaPredicted RBP18.46■□□□□ 0.55
SMCHD1-201ENST00000320876 SGSM2O43147 1006 aa18.46■□□□□ 0.55
SMCHD1-201ENST00000320876 KRT19P08727 400 aa18.46■□□□□ 0.55
SMCHD1-201ENST00000320876 EPHB4P54760 987 aa18.46■□□□□ 0.55
SMCHD1-201ENST00000320876 TNNI3KQ59H18 835 aa18.46■□□□□ 0.54
SMCHD1-201ENST00000320876 NOC2LQ9Y3T9 749 aaKnown RBP18.46■□□□□ 0.54
SMCHD1-201ENST00000320876 FPGT-TNNI3KV9GXZ4 949 aa18.46■□□□□ 0.54
SMCHD1-201ENST00000320876 CD2APQ9Y5K6 639 aa18.45■□□□□ 0.54
SMCHD1-201ENST00000320876 CD19P15391 556 aa18.45■□□□□ 0.54
SMCHD1-201ENST00000320876 RBM6P78332 1123 aaKnown RBP18.45■□□□□ 0.54
SMCHD1-201ENST00000320876 INHBAP08476 426 aa18.45■□□□□ 0.54
SMCHD1-201ENST00000320876 GUCY2DQ02846 1103 aa18.45■□□□□ 0.54
SMCHD1-201ENST00000320876 SAP30BPQ9UHR5 308 aaKnown RBP18.45■□□□□ 0.54
SMCHD1-201ENST00000320876 ECE1P42892 770 aa18.45■□□□□ 0.54
SMCHD1-201ENST00000320876 CCDC68Q9H2F9 335 aa18.45■□□□□ 0.54
SMCHD1-201ENST00000320876 ARHGAP44Q17R89 818 aa18.45■□□□□ 0.54
SMCHD1-201ENST00000320876 PPP1R13BQ96KQ4 1090 aa18.45■□□□□ 0.54
SMCHD1-201ENST00000320876 CABP7Q86V35 215 aa18.45■□□□□ 0.54
SMCHD1-201ENST00000320876 LAMC3Q9Y6N6 1575 aa18.45■□□□□ 0.54
SMCHD1-201ENST00000320876 VAMP4O75379 141 aa18.44■□□□□ 0.54
SMCHD1-201ENST00000320876 ETF1P62495 437 aaKnown RBP18.44■□□□□ 0.54
SMCHD1-201ENST00000320876 JPH2Q9BR39 696 aaPredicted RBP18.44■□□□□ 0.54
SMCHD1-201ENST00000320876 RCN2Q14257 317 aa18.44■□□□□ 0.54
SMCHD1-201ENST00000320876 BLZF1Q9H2G9 400 aa18.44■□□□□ 0.54
SMCHD1-201ENST00000320876 NLRC4Q9NPP4 1024 aa18.44■□□□□ 0.54
SMCHD1-201ENST00000320876 AZI2Q9H6S1 392 aa18.44■□□□□ 0.54
SMCHD1-201ENST00000320876 C1orf112Q9NSG2 853 aa18.44■□□□□ 0.54
SMCHD1-201ENST00000320876 PPME1Q9Y570 386 aa18.44■□□□□ 0.54
SMCHD1-201ENST00000320876 ARHGEF18Q6ZSZ5 1173 aa18.44■□□□□ 0.54
SMCHD1-201ENST00000320876 H7C1D1 291 aa18.44■□□□□ 0.54
SMCHD1-201ENST00000320876 OTUD6AQ7L8S5 288 aa18.44■□□□□ 0.54
SMCHD1-201ENST00000320876 DYMQ7RTS9 669 aa18.44■□□□□ 0.54
SMCHD1-201ENST00000320876 ABTB1Q969K4 478 aaPredicted RBP18.44■□□□□ 0.54
SMCHD1-201ENST00000320876 HDAC11Q96DB2 347 aa18.44■□□□□ 0.54
SMCHD1-201ENST00000320876 ZC3H15Q8WU90 426 aaKnown RBP18.44■□□□□ 0.54
SMCHD1-201ENST00000320876 POMGNT1Q8WZA1 660 aa18.44■□□□□ 0.54
SMCHD1-201ENST00000320876 BUB1O43683 1085 aa18.44■□□□□ 0.54
SMCHD1-201ENST00000320876 MAST3O60307 1309 aa18.43■□□□□ 0.54
SMCHD1-201ENST00000320876 KCTD16Q68DU8 428 aa18.43■□□□□ 0.54
SMCHD1-201ENST00000320876 TTC19Q6DKK2 380 aaPredicted RBP18.43■□□□□ 0.54
SMCHD1-201ENST00000320876 ACTR5Q9H9F9 607 aaPredicted RBP18.43■□□□□ 0.54
SMCHD1-201ENST00000320876 EEF1DP29692 281 aaKnown RBP18.43■□□□□ 0.54
SMCHD1-201ENST00000320876 PCDHB13Q9Y5F0 798 aa18.43■□□□□ 0.54
SMCHD1-201ENST00000320876 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.43■□□□□ 0.54
SMCHD1-201ENST00000320876 MYOCDQ8IZQ8 938 aa18.43■□□□□ 0.54
SMCHD1-201ENST00000320876 TCP11Q8WWU5 503 aa18.43■□□□□ 0.54
SMCHD1-201ENST00000320876 MAN1A2O60476 641 aa18.43■□□□□ 0.54
SMCHD1-201ENST00000320876 S100BP04271 92 aaPredicted RBP18.43■□□□□ 0.54
SMCHD1-201ENST00000320876 SLC1A4P43007 532 aa18.43■□□□□ 0.54
SMCHD1-201ENST00000320876 CDR2Q01850 454 aa18.43■□□□□ 0.54
SMCHD1-201ENST00000320876 MAGEF1Q9HAY2 307 aa18.42■□□□□ 0.54
SMCHD1-201ENST00000320876 TMEM63CQ9P1W3 806 aa18.42■□□□□ 0.54
SMCHD1-201ENST00000320876 PTPN22Q9Y2R2 807 aa18.42■□□□□ 0.54
SMCHD1-201ENST00000320876 EEF1GP26641 437 aaKnown RBP18.42■□□□□ 0.54
SMCHD1-201ENST00000320876 ZKSCAN8Q15776 578 aaPredicted RBP18.42■□□□□ 0.54
SMCHD1-201ENST00000320876 KRT40Q6A162 431 aa18.42■□□□□ 0.54
SMCHD1-201ENST00000320876 MAEAQ7L5Y9 396 aa18.42■□□□□ 0.54
SMCHD1-201ENST00000320876 SLFN12Q8IYM2 578 aa18.42■□□□□ 0.54
SMCHD1-201ENST00000320876 HACE1Q8IYU2 909 aa18.42■□□□□ 0.54
SMCHD1-201ENST00000320876 GNGT2O14610 69 aa18.42■□□□□ 0.54
SMCHD1-201ENST00000320876 RAB44Q7Z6P3 723 aaPredicted RBP18.42■□□□□ 0.54
SMCHD1-201ENST00000320876 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.42■□□□□ 0.54
SMCHD1-201ENST00000320876 PFKFB1P16118 471 aa18.42■□□□□ 0.54
SMCHD1-201ENST00000320876 SLC39A6Q13433 755 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 CCHCR1Q8TD31 782 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 IFT122Q9HBG6 1241 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 ARMCX3Q9UH62 379 aaPredicted RBP18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 NPATQ14207 1427 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 ESYT2A0FGR8 921 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 ST13P4Q8IZP2 240 aaPredicted RBP18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 PCDH11XQ9BZA7 1347 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 PCDH11YQ9BZA8 1340 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 TTI1O43156 1089 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 CCDC138Q96M89 665 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 EEF1B2P24534 225 aaKnown RBP18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 EIF4A2Q14240 407 aaKnown RBP18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 PRPSAP1Q14558 356 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 NOSTRINQ8IVI9 506 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 PIP4K2CQ8TBX8 421 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 EXOC4Q96A65 974 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 ARMT1Q9H993 441 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 A0A087WUV0 522 aaPredicted RBP18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 CASP2P42575 452 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 DMP1Q13316 513 aaPredicted RBP18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 NFATC2IPQ8NCF5 419 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 VPS41P49754 854 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 BIRC2Q13490 618 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 RBM17Q96I25 401 aaKnown RBP18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 SERPINI1Q99574 410 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 GPBP1Q86WP2 473 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 JDP2Q8WYK2 163 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 MAD1L1Q9Y6D9 718 aa18.41■□□□□ 0.54
SMCHD1-201ENST00000320876 SYF2O95926 243 aaKnown RBP18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 SRGAP2BP0DMP2 458 aa18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 LMNAP02545 664 aaKnown RBP18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 LCA5Q86VQ0 697 aa18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 SEPT8Q92599 483 aa18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 H0YCG3 227 aa18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 TMTC4Q5T4D3 741 aa18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 DDX39AO00148 427 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms