RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 UBXN4Q92575 508 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 NAA15Q9BXJ9 866 aaKnown RBP17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 MKNK2Q9HBH9 465 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 GDAQ9Y2T3 454 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 LEMD3Q9Y2U8 911 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 CDK5RAP2Q96SN8 1893 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 PP2D1A8MPX8 630 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 EFCAB8A8MWE9 144 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 CCDC175P0C221 793 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 RASA1P20936 1047 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 GNAQP50148 359 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 COPB1P53618 953 aaKnown RBP17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 GSTO1P78417 241 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 NAALADL2Q58DX5 795 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 TGFBRAP1Q8WUH2 860 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 TAB2Q9NYJ8 693 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 SAP30BPQ9UHR5 308 aaKnown RBP17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 DDX60LQ5H9U9 1706 aaKnown RBP17.19■□□□□ 0.34
SPIRE1-201ENST00000309836 SNED1Q8TER0 1413 aa17.19■□□□□ 0.34
SPIRE1-201ENST00000309836 CCDC194A0A1B0GVG4 234 aa17.19■□□□□ 0.34
SPIRE1-201ENST00000309836 PALM3A6NDB9 673 aaPredicted RBP17.19■□□□□ 0.34
SPIRE1-201ENST00000309836 LRRC10BA6NIK2 292 aa17.19■□□□□ 0.34
SPIRE1-201ENST00000309836 TSPY3P0CV98 308 aa17.19■□□□□ 0.34
SPIRE1-201ENST00000309836 TSPY8P0CW00 308 aa17.19■□□□□ 0.34
SPIRE1-201ENST00000309836 STAT6P42226 847 aa17.19■□□□□ 0.34
SPIRE1-201ENST00000309836 PIP4K2BP78356 416 aa17.19■□□□□ 0.34
SPIRE1-201ENST00000309836 CCDC178Q5BJE1 867 aa17.19■□□□□ 0.34
SPIRE1-201ENST00000309836 C8orf37Q96NL8 207 aa17.19■□□□□ 0.34
SPIRE1-201ENST00000309836 TMEM47Q9BQJ4 181 aa17.19■□□□□ 0.34
SPIRE1-201ENST00000309836 DISC1Q9NRI5 854 aa17.19■□□□□ 0.34
SPIRE1-201ENST00000309836 RMND1Q9NWS8 449 aa17.19■□□□□ 0.34
SPIRE1-201ENST00000309836 LY75O60449 1722 aa17.19■□□□□ 0.34
SPIRE1-201ENST00000309836 THSD7AQ9UPZ6 1657 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 RNF225M0QZC1 329 aaPredicted RBP17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 IGSF3O75054 1194 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 PRCPP42785 496 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 PPP2R3AQ06190 1150 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 GABPB1Q06547 395 aaPredicted RBP17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 INF2Q27J81 1249 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 RASGRP2Q7LDG7 609 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 HEATR3Q7Z4Q2 680 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 MAPKAPK5Q8IW41 473 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 RTFDC1Q9BY42 306 aaPredicted RBP17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 IRX2Q9BZI1 471 aaPredicted RBP17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 BARHL2Q9NY43 387 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 FHOD1Q9Y613 1164 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 KCNJ18B7U540 433 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 BAG3O95817 575 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 TXLNAP40222 546 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 KCNJ12Q14500 433 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 TCP11X2Q5H9J9 407 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 FAM182BQ5T319 152 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 C15orf52Q6ZUT6 534 aaKnown RBP17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 ZNF804AQ7Z570 1209 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 LRRC15Q8TF66 581 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 CCDC51Q96ER9 411 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 VPS16Q9H269 839 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 MTMR7Q9Y216 660 aa17.18■□□□□ 0.34
SPIRE1-201ENST00000309836 N4BP3O15049 544 aa17.17■□□□□ 0.34
SPIRE1-201ENST00000309836 KLRC4O43908 158 aa17.17■□□□□ 0.34
SPIRE1-201ENST00000309836 GPSM2P81274 684 aa17.17■□□□□ 0.34
SPIRE1-201ENST00000309836 SPAG1Q07617 926 aa17.17■□□□□ 0.34
SPIRE1-201ENST00000309836 DTHD1Q6ZMT9 781 aa17.17■□□□□ 0.34
SPIRE1-201ENST00000309836 RSRC2Q7L4I2 434 aaKnown RBP17.17■□□□□ 0.34
SPIRE1-201ENST00000309836 IRF2BP1Q8IU81 584 aa17.17■□□□□ 0.34
SPIRE1-201ENST00000309836 CNGA4Q8IV77 575 aa17.17■□□□□ 0.34
SPIRE1-201ENST00000309836 ZNF444Q8N0Y2 327 aaPredicted RBP17.17■□□□□ 0.34
SPIRE1-201ENST00000309836 CCDC148Q8NFR7 591 aa17.17■□□□□ 0.34
SPIRE1-201ENST00000309836 NGLY1Q96IV0 654 aa17.17■□□□□ 0.34
SPIRE1-201ENST00000309836 MAPK8IP1Q9UQF2 711 aa17.17■□□□□ 0.34
SPIRE1-201ENST00000309836 ZRANB2O95218 330 aaKnown RBP eCLIP17.16■□□□□ 0.34
SPIRE1-201ENST00000309836 GOLGA8HP0CJ92 632 aa17.16■□□□□ 0.34
SPIRE1-201ENST00000309836 ERVK-24P63145 666 aa17.16■□□□□ 0.34
SPIRE1-201ENST00000309836 GALNT17Q6IS24 598 aa17.16■□□□□ 0.34
SPIRE1-201ENST00000309836 AMOTL1Q8IY63 956 aa17.16■□□□□ 0.34
SPIRE1-201ENST00000309836 ADSSL1Q8N142 457 aa17.16■□□□□ 0.34
SPIRE1-201ENST00000309836 CCDC12Q8WUD4 166 aaPredicted RBP17.16■□□□□ 0.34
SPIRE1-201ENST00000309836 EPC1Q9H2F5 836 aa17.16■□□□□ 0.34
SPIRE1-201ENST00000309836 CPVLQ9H3G5 476 aa17.16■□□□□ 0.34
SPIRE1-201ENST00000309836 LZTFL1Q9NQ48 299 aa17.16■□□□□ 0.34
SPIRE1-201ENST00000309836 LDHCP07864 332 aa17.16■□□□□ 0.34
SPIRE1-201ENST00000309836 BMS1Q14692 1282 aaKnown RBP17.16■□□□□ 0.34
SPIRE1-201ENST00000309836 TRIM49BA6NDI0 452 aa17.15■□□□□ 0.34
SPIRE1-201ENST00000309836 TPM1P09493 284 aa17.15■□□□□ 0.34
SPIRE1-201ENST00000309836 PNMA6AP0CW24 399 aaPredicted RBP17.15■□□□□ 0.34
SPIRE1-201ENST00000309836 RFC4P35249 363 aa17.15■□□□□ 0.34
SPIRE1-201ENST00000309836 BTDP43251 543 aa17.15■□□□□ 0.34
SPIRE1-201ENST00000309836 CNBD1Q8NA66 436 aa17.15■□□□□ 0.34
SPIRE1-201ENST00000309836 ACRBPQ8NEB7 543 aa17.15■□□□□ 0.34
SPIRE1-201ENST00000309836 LZTS2Q9BRK4 669 aa17.15■□□□□ 0.34
SPIRE1-201ENST00000309836 SPZ1Q9BXG8 430 aa17.15■□□□□ 0.34
SPIRE1-201ENST00000309836 CCSER1Q9C0I3 900 aa17.15■□□□□ 0.34
SPIRE1-201ENST00000309836 ST7Q9NRC1 585 aa17.15■□□□□ 0.34
SPIRE1-201ENST00000309836 STX8Q9UNK0 236 aa17.15■□□□□ 0.34
SPIRE1-201ENST00000309836 FLT1P17948 1338 aa17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 PARP1P09874 1014 aaKnown RBP17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 CDK8P49336 464 aa17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 PMS1P54277 932 aaKnown RBP17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 KCNB1Q14721 858 aa17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 C16orf86Q6ZW13 317 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms