RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 TUBBP07437 444 aa20.95■□□□□ 0.94
SSC4D-201ENST00000275560 ATP2C1P98194 919 aaPredicted RBP20.95■□□□□ 0.94
SSC4D-201ENST00000275560 PUM3Q15397 648 aaKnown RBP20.95■□□□□ 0.94
SSC4D-201ENST00000275560 PAPD7Q5XG87 772 aaKnown RBP20.95■□□□□ 0.94
SSC4D-201ENST00000275560 CCNI2Q6ZMN8 369 aaPredicted RBP20.95■□□□□ 0.94
SSC4D-201ENST00000275560 PCDH11XQ9BZA7 1347 aa20.95■□□□□ 0.94
SSC4D-201ENST00000275560 PCDH11YQ9BZA8 1340 aa20.95■□□□□ 0.94
SSC4D-201ENST00000275560 MYH2Q9UKX2 1941 aa20.95■□□□□ 0.94
SSC4D-201ENST00000275560 ALS2Q96Q42 1657 aa20.94■□□□□ 0.94
SSC4D-201ENST00000275560 PP2D1A8MPX8 630 aa20.94■□□□□ 0.94
SSC4D-201ENST00000275560 XBP1P17861 261 aa20.94■□□□□ 0.94
SSC4D-201ENST00000275560 SLC7A5Q01650 507 aa20.94■□□□□ 0.94
SSC4D-201ENST00000275560 MAP9Q49MG5 647 aa20.94■□□□□ 0.94
SSC4D-201ENST00000275560 ZNF658Q5TYW1 1059 aaPredicted RBP20.94■□□□□ 0.94
SSC4D-201ENST00000275560 KAT2BQ92831 832 aa20.94■□□□□ 0.94
SSC4D-201ENST00000275560 EHD2Q9NZN4 543 aa20.94■□□□□ 0.94
SSC4D-201ENST00000275560 GOLGA6CA6NDK9 693 aa20.94■□□□□ 0.94
SSC4D-201ENST00000275560 ERVV-2B6SEH9 535 aa20.94■□□□□ 0.94
SSC4D-201ENST00000275560 GOLGA6DP0CG33 693 aa20.94■□□□□ 0.94
SSC4D-201ENST00000275560 IDEP14735 1019 aa20.94■□□□□ 0.94
SSC4D-201ENST00000275560 SPAG1Q07617 926 aa20.94■□□□□ 0.94
SSC4D-201ENST00000275560 TRIM14Q14142 442 aa20.94■□□□□ 0.94
SSC4D-201ENST00000275560 KRT26Q7Z3Y9 468 aa20.94■□□□□ 0.94
SSC4D-201ENST00000275560 TADA2BQ86TJ2 420 aa20.94■□□□□ 0.94
SSC4D-201ENST00000275560 FAM76AQ8TAV0 307 aa20.94■□□□□ 0.94
SSC4D-201ENST00000275560 LPIN2Q92539 896 aa20.94■□□□□ 0.94
SSC4D-201ENST00000275560 TNFRSF25Q93038 417 aa20.94■□□□□ 0.94
SSC4D-201ENST00000275560 GOLGA6AQ9NYA3 693 aa20.94■□□□□ 0.94
SSC4D-201ENST00000275560 GTPBP6O43824 516 aaPredicted RBP20.93■□□□□ 0.94
SSC4D-201ENST00000275560 IRAK1P51617 712 aa20.93■□□□□ 0.94
SSC4D-201ENST00000275560 DNAJC7Q99615 494 aa20.93■□□□□ 0.94
SSC4D-201ENST00000275560 TNS3Q68CZ2 1445 aa20.93■□□□□ 0.94
SSC4D-201ENST00000275560 UBR2Q8IWV8 1755 aa20.93■□□□□ 0.94
SSC4D-201ENST00000275560 GOLGA6BA6NDN3 693 aa20.93■□□□□ 0.94
SSC4D-201ENST00000275560 GIGYF2Q6Y7W6 1299 aaKnown RBP20.93■□□□□ 0.94
SSC4D-201ENST00000275560 SND1Q7KZF4 910 aaKnown RBP eCLIP20.93■□□□□ 0.941e-12■□□□□ 9.3
SSC4D-201ENST00000275560 DMGDHQ9UI17 866 aaKnown RBP20.93■□□□□ 0.94
SSC4D-201ENST00000275560 SAMM50Q9Y512 469 aa20.93■□□□□ 0.94
SSC4D-201ENST00000275560 NMT2O60551 498 aa20.92■□□□□ 0.94
SSC4D-201ENST00000275560 FGFR2P21802 821 aa20.92■□□□□ 0.94
SSC4D-201ENST00000275560 LRP2BPQ9P2M1 347 aa20.92■□□□□ 0.94
SSC4D-201ENST00000275560 PLEKP08567 350 aaPredicted RBP20.92■□□□□ 0.94
SSC4D-201ENST00000275560 CXCR5P32302 372 aa20.92■□□□□ 0.94
SSC4D-201ENST00000275560 EFCAB13Q8IY85 973 aa20.92■□□□□ 0.94
SSC4D-201ENST00000275560 TMTC2Q8N394 836 aa20.92■□□□□ 0.94
SSC4D-201ENST00000275560 KAT6BQ8WYB5 2073 aa20.92■□□□□ 0.94
SSC4D-201ENST00000275560 RASSF10A6NK89 507 aa20.91■□□□□ 0.94
SSC4D-201ENST00000275560 LGALS16A8MUM7 142 aa20.91■□□□□ 0.94
SSC4D-201ENST00000275560 LRRC1Q9BTT6 524 aa20.91■□□□□ 0.94
SSC4D-201ENST00000275560 TSR1Q2NL82 804 aaKnown RBP20.91■□□□□ 0.94
SSC4D-201ENST00000275560 IFIT1BQ5T764 474 aaKnown RBP20.91■□□□□ 0.94
SSC4D-201ENST00000275560 ZNF507Q8TCN5 953 aa20.91■□□□□ 0.94
SSC4D-201ENST00000275560 RASGRP4Q8TDF6 673 aa20.91■□□□□ 0.94
SSC4D-201ENST00000275560 NHEJ1Q9H9Q4 299 aaPredicted RBP20.91■□□□□ 0.94
SSC4D-201ENST00000275560 ABCF2Q9UG63 623 aa20.91■□□□□ 0.94
SSC4D-201ENST00000275560 TRIM21P19474 475 aaKnown RBP20.91■□□□□ 0.94
SSC4D-201ENST00000275560 EIF5P55010 431 aaKnown RBP20.91■□□□□ 0.94
SSC4D-201ENST00000275560 FBXW10Q5XX13 1052 aa20.91■□□□□ 0.94
SSC4D-201ENST00000275560 TRIM47Q96LD4 638 aa20.91■□□□□ 0.94
SSC4D-201ENST00000275560 CAPN11Q9UMQ6 739 aa20.91■□□□□ 0.94
SSC4D-201ENST00000275560 PRPF3O43395 683 aaKnown RBP20.9■□□□□ 0.94
SSC4D-201ENST00000275560 CYP7A1P22680 504 aa20.9■□□□□ 0.94
SSC4D-201ENST00000275560 BCAS4Q8TDM0 211 aa20.9■□□□□ 0.94
SSC4D-201ENST00000275560 PCMTD1Q96MG8 357 aaPredicted RBP20.9■□□□□ 0.94
SSC4D-201ENST00000275560 ZSCAN10Q96SZ4 725 aaPredicted RBP20.9■□□□□ 0.94
SSC4D-201ENST00000275560 TIAM2Q8IVF5 1701 aa20.9■□□□□ 0.94
SSC4D-201ENST00000275560 MYH10P35580 1976 aa20.9■□□□□ 0.94
SSC4D-201ENST00000275560 WTIPA6NIX2 430 aaPredicted RBP20.9■□□□□ 0.94
SSC4D-201ENST00000275560 KRT86O43790 486 aa20.9■□□□□ 0.94
SSC4D-201ENST00000275560 STAT6P42226 847 aa20.9■□□□□ 0.94
SSC4D-201ENST00000275560 SRBD1Q8N5C6 995 aaKnown RBP20.9■□□□□ 0.94
SSC4D-201ENST00000275560 ESR2Q92731 530 aa20.9■□□□□ 0.94
SSC4D-201ENST00000275560 MLXIPQ9HAP2 919 aa20.9■□□□□ 0.94
SSC4D-201ENST00000275560 LRWD1Q9UFC0 647 aa20.9■□□□□ 0.94
SSC4D-201ENST00000275560 FAM169AQ9Y6X4 670 aa20.9■□□□□ 0.94
SSC4D-201ENST00000275560 ADAMTSL3P82987 1691 aa20.89■□□□□ 0.94
SSC4D-201ENST00000275560 TARSL2A2RTX5 802 aaKnown RBP20.89■□□□□ 0.94
SSC4D-201ENST00000275560 ZNF263O14978 683 aa20.89■□□□□ 0.94
SSC4D-201ENST00000275560 SHOX2O60902 331 aaPredicted RBP20.89■□□□□ 0.94
SSC4D-201ENST00000275560 GUCY2CP25092 1073 aa20.89■□□□□ 0.94
SSC4D-201ENST00000275560 PPARDQ03181 441 aa20.89■□□□□ 0.94
SSC4D-201ENST00000275560 ADSSL1Q8N142 457 aa20.89■□□□□ 0.94
SSC4D-201ENST00000275560 RASSF8Q8NHQ8 419 aa20.89■□□□□ 0.94
SSC4D-201ENST00000275560 BRMS1Q9HCU9 246 aa20.89■□□□□ 0.94
SSC4D-201ENST00000275560 CAPN6Q9Y6Q1 641 aa20.89■□□□□ 0.94
SSC4D-201ENST00000275560 SLC5A1P13866 664 aa20.89■□□□□ 0.93
SSC4D-201ENST00000275560 NLRP5P59047 1200 aa20.89■□□□□ 0.93
SSC4D-201ENST00000275560 GNGT1P63211 74 aa20.89■□□□□ 0.93
SSC4D-201ENST00000275560 CATIPQ7Z7H3 387 aa20.89■□□□□ 0.93
SSC4D-201ENST00000275560 RNF41Q9H4P4 317 aaPredicted RBP20.89■□□□□ 0.93
SSC4D-201ENST00000275560 H7C1D1 291 aa20.88■□□□□ 0.93
SSC4D-201ENST00000275560 CKAP4Q07065 602 aaKnown RBP20.88■□□□□ 0.93
SSC4D-201ENST00000275560 TSEN2Q8NCE0 465 aaKnown RBP20.88■□□□□ 0.93
SSC4D-201ENST00000275560 ARL8AQ96BM9 186 aa20.88■□□□□ 0.93
SSC4D-201ENST00000275560 A0A087WUV0 522 aaPredicted RBP20.88■□□□□ 0.93
SSC4D-201ENST00000275560 MCM3P25205 808 aa20.88■□□□□ 0.93
SSC4D-201ENST00000275560 DYNLL1P63167 89 aaKnown RBP20.88■□□□□ 0.93
SSC4D-201ENST00000275560 TROAPQ12815 778 aa20.88■□□□□ 0.93
SSC4D-201ENST00000275560 SLC4A8Q2Y0W8 1093 aa20.88■□□□□ 0.93
SSC4D-201ENST00000275560 AENQ8WTP8 325 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms