RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 CETN3O15182 167 aa12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 EPB41P11171 864 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 KRT24Q2M2I5 525 aa12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 ARL6IP4Q66PJ3 421 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 RRP36Q96EU6 259 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 CXorf56Q9H5V9 222 aa12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 CABP5Q9NP86 173 aa12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 MCM7P33993 719 aa12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 WDR93Q6P2C0 686 aa12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 PBKQ96KB5 322 aa12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 MEFVO15553 781 aaPredicted RBP12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 DYNC1I2Q13409 638 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 E2F4Q16254 413 aa12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 E4F1Q66K89 784 aaPredicted RBP12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 CTTNBP2NLQ9P2B4 639 aa12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 I3L4J1 428 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 ATP1A2P50993 1020 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 CCDC97Q96F63 343 aaPredicted RBP12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 TAB2Q9NYJ8 693 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 CCDC144BQ3MJ40 725 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 CWF19L2Q2TBE0 894 aaKnown RBP12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 SLC4A4Q9Y6R1 1079 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 TRAF5O00463 557 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 KIFAP3Q92845 792 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 VTI1AQ96AJ9 217 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 SCOCQ9UIL1 159 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 FRMD4BQ9Y2L6 1034 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 TLDC2A0PJX2 215 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 CRYMQ14894 314 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 MPHOSPH6Q99547 160 aaKnown RBP12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 KDM3AQ9Y4C1 1321 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 EIF3HO15372 352 aaKnown RBP eCLIP12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 STX2P32856 288 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 DEUP1Q05D60 604 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 KLHL30Q0D2K2 578 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 EAF2Q96CJ1 260 aaPredicted RBP12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 PRDM11Q9NQV5 511 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 TRMT112Q9UI30 125 aaKnown RBP12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 AMFRQ9UKV5 643 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 PLEKHG3A1L390 1219 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 CTNND1O60716 968 aaKnown RBP12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 NAPAP54920 295 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 RCSD1Q6JBY9 416 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 GRK7Q8WTQ7 553 aa12.87□□□□□ -0.35
DNMT3A-201ENST00000264709 SOS2Q07890 1332 aaPredicted RBP12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 KIF23Q02241 960 aaPredicted RBP12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 ASIC2Q16515 512 aa12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 ZMYM1Q5SVZ6 1142 aa12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 IP6K1Q92551 441 aa12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 THAP9Q9H5L6 903 aa12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 PASKQ96RG2 1323 aa12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 HNRNPCL1O60812 293 aaKnown RBP12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 TEX11Q8IYF3 940 aa12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 UBA5Q9GZZ9 404 aa12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 KCNK9Q9NPC2 374 aa12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 FHOD1Q9Y613 1164 aa12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 CIAO1O76071 339 aa12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 SNRKQ9NRH2 765 aa12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 PPRC1Q5VV67 1664 aaKnown RBP12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 ATXN2Q99700 1313 aaKnown RBP12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 KRIT1O00522 736 aa12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 MKRN3Q13064 507 aaKnown RBP12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 PPP1R12CQ9BZL4 782 aa12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 ATG3Q9NT62 314 aa12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 GUCY2DQ02846 1103 aa12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 SUGP1Q8IWZ8 645 aaKnown RBP12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 SMIM24O75264 130 aa12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 TROVE2P10155 538 aaKnown RBP eCLIP12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 LMNB2Q03252 620 aa12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 PUM3Q15397 648 aaKnown RBP12.86□□□□□ -0.35
DNMT3A-201ENST00000264709 ITIH6Q6UXX5 1313 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 USP14P54578 494 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 KLC4Q9NSK0 619 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 PARP3Q9Y6F1 533 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 MSANTD4Q8NCY6 345 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 HEXIM1O94992 359 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 SATB1Q01826 763 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 VPS52Q8N1B4 723 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 PDE4DQ08499 809 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 ANKRD20A3Q5VUR7 823 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 OSBPL9Q96SU4 736 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 EPN3Q9H201 632 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 CEP104O60308 925 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 ADCY2Q08462 1091 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 TRPC3Q13507 836 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 UNC5CLQ8IV45 518 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 TRMT44Q8IYL2 757 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 ARHGAP18Q8N392 663 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 A0A1W2PQC6 194 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 CALUO43852 315 aaPredicted RBP12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 CHAMP1Q96JM3 812 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 ARMCX5Q6P1M9 558 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 SYCP3Q8IZU3 236 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 GFM2Q969S9 779 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 RBM26Q5T8P6 1007 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 ARHGEF18Q6ZSZ5 1173 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 TOM1L2Q6ZVM7 507 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 RASGRP2Q7LDG7 609 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms