RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 PARD6BQ9BYG5 372 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 EPB41L5Q9HCM4 733 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 AFG3L2Q9Y4W6 797 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 CD2APQ9Y5K6 639 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 SYCP2Q9BX26 1530 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 TNNI1P19237 187 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 RASSF2P50749 326 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 DCLK2Q8N568 766 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 RSAD2Q8WXG1 361 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 RPN1P04843 607 aaKnown RBP13.27□□□□□ -0.29
SMG6-201ENST00000263073 HNRNPH2P55795 449 aaKnown RBP13.27□□□□□ -0.29
SMG6-201ENST00000263073 SCYL2Q6P3W7 929 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 FBXO38Q6PIJ6 1188 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 DCAF5Q96JK2 942 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 INTUQ9ULD6 942 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 RASIP1Q5U651 963 aa13.26□□□□□ -0.29
SMG6-201ENST00000263073 MOCS3O95396 460 aa13.26□□□□□ -0.29
SMG6-201ENST00000263073 LARGE1O95461 756 aa13.26□□□□□ -0.29
SMG6-201ENST00000263073 MX2P20592 715 aa13.26□□□□□ -0.29
SMG6-201ENST00000263073 CACNB1Q02641 598 aaPredicted RBP13.26□□□□□ -0.29
SMG6-201ENST00000263073 NAA30Q147X3 362 aaPredicted RBP13.26□□□□□ -0.29
SMG6-201ENST00000263073 DDB1Q16531 1140 aa13.26□□□□□ -0.29
SMG6-201ENST00000263073 COL17A1Q9UMD9 1497 aaPredicted RBP13.26□□□□□ -0.29
SMG6-201ENST00000263073 HSPD1P10809 573 aaKnown RBP13.26□□□□□ -0.29
SMG6-201ENST00000263073 PRKG1Q13976 671 aa13.26□□□□□ -0.29
SMG6-201ENST00000263073 KRT25Q7Z3Z0 450 aa13.26□□□□□ -0.29
SMG6-201ENST00000263073 TRIM4Q9C037 500 aa13.26□□□□□ -0.29
SMG6-201ENST00000263073 SEPT10Q9P0V9 454 aa13.26□□□□□ -0.29
SMG6-201ENST00000263073 TRAF1Q13077 416 aa13.26□□□□□ -0.29
SMG6-201ENST00000263073 GDAP1Q8TB36 358 aa13.26□□□□□ -0.29
SMG6-201ENST00000263073 THOC1Q96FV9 657 aaKnown RBP13.26□□□□□ -0.29
SMG6-201ENST00000263073 NYXQ9GZU5 481 aa13.26□□□□□ -0.29
SMG6-201ENST00000263073 PFKFB2O60825 505 aa13.26□□□□□ -0.29
SMG6-201ENST00000263073 CCDC84Q86UT8 332 aaPredicted RBP13.26□□□□□ -0.29
SMG6-201ENST00000263073 PANK4Q9NVE7 773 aa13.26□□□□□ -0.29
SMG6-201ENST00000263073 MAGED2Q9UNF1 606 aaPredicted RBP13.26□□□□□ -0.29
SMG6-201ENST00000263073 PCDHA5Q9Y5H7 936 aa13.26□□□□□ -0.29
SMG6-201ENST00000263073 CFAP43Q8NDM7 1665 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 XRCC5P13010 732 aaKnown RBP13.25□□□□□ -0.29
SMG6-201ENST00000263073 CMA1P23946 247 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 COPB1P53618 953 aaKnown RBP13.25□□□□□ -0.29
SMG6-201ENST00000263073 TBK1Q9UHD2 729 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 GNPATO15228 680 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 FTCDO95954 541 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 PDIA3P30101 505 aaKnown RBP13.25□□□□□ -0.29
SMG6-201ENST00000263073 STAT1P42224 750 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 SLC1A4P43007 532 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 RASGRP4Q8TDF6 673 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 CDC23Q9UJX2 597 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 ADCY9O60503 1353 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 MAP7Q14244 749 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 PPP2R5AQ15172 486 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 LRRC41Q15345 812 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 CCDC51Q96ER9 411 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 DSCC1Q9BVC3 393 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 ANKRD2Q9GZV1 360 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 LSG1Q9H089 658 aaKnown RBP13.25□□□□□ -0.29
SMG6-201ENST00000263073 USP44Q9H0E7 712 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 ZFYVE9O95405 1425 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 LRRC24Q50LG9 513 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 C8orf37Q96NL8 207 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 ATP8A1Q9Y2Q0 1164 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 RGS12O14924 1447 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 CDC25AP30304 524 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 FAM102BQ5T8I3 360 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 MYOCDQ8IZQ8 938 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 EPC1Q9H2F5 836 aa13.25□□□□□ -0.29
SMG6-201ENST00000263073 SAMSN1Q9NSI8 373 aaKnown RBP13.25□□□□□ -0.29
SMG6-201ENST00000263073 PTGDRQ13258 359 aa13.24□□□□□ -0.29
SMG6-201ENST00000263073 ZNF589Q86UQ0 364 aaPredicted RBP13.24□□□□□ -0.29
SMG6-201ENST00000263073 CXorf38Q8TB03 319 aa13.24□□□□□ -0.29
SMG6-201ENST00000263073 MED4Q9NPJ6 270 aa13.24□□□□□ -0.29
SMG6-201ENST00000263073 BLMP54132 1417 aaPredicted RBP13.24□□□□□ -0.29
SMG6-201ENST00000263073 TAF12Q16514 161 aa13.24□□□□□ -0.29
SMG6-201ENST00000263073 PRR16Q569H4 304 aa13.24□□□□□ -0.29
SMG6-201ENST00000263073 OTUD6AQ7L8S5 288 aa13.24□□□□□ -0.29
SMG6-201ENST00000263073 REXO1Q8N1G1 1221 aaKnown RBP13.24□□□□□ -0.29
SMG6-201ENST00000263073 SPTLC3Q9NUV7 552 aa13.24□□□□□ -0.29
SMG6-201ENST00000263073 RTCBQ9Y3I0 505 aaKnown RBP13.24□□□□□ -0.29
SMG6-201ENST00000263073 NUP160Q12769 1436 aa13.24□□□□□ -0.29
SMG6-201ENST00000263073 SPATA1Q5VX52 437 aa13.24□□□□□ -0.29
SMG6-201ENST00000263073 AP1ARQ63HQ0 302 aa13.24□□□□□ -0.29
SMG6-201ENST00000263073 CNOT6LQ96LI5 555 aaKnown RBP13.24□□□□□ -0.29
SMG6-201ENST00000263073 USP17L12C9JPN9 530 aa13.24□□□□□ -0.29
SMG6-201ENST00000263073 USP17L21D6R901 530 aa13.24□□□□□ -0.29
SMG6-201ENST00000263073 PDE8AO60658 829 aa13.24□□□□□ -0.29
SMG6-201ENST00000263073 GSPT2Q8IYD1 628 aaKnown RBP13.24□□□□□ -0.29
SMG6-201ENST00000263073 RABGGTAQ92696 567 aa13.24□□□□□ -0.29
SMG6-201ENST00000263073 ZMYM6O95789 1325 aa13.24□□□□□ -0.29
SMG6-201ENST00000263073 SPECC1L-ADORA2AF8WAN1 911 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 FGAP02671 866 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 ABTB1Q969K4 478 aaPredicted RBP13.23□□□□□ -0.29
SMG6-201ENST00000263073 PGBD1Q96JS3 809 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 RPGRIP1Q96KN7 1286 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 TM6SF1Q9BZW5 370 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 HOMER3Q9NSC5 361 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 HEXIM1O94992 359 aaKnown RBP13.23□□□□□ -0.29
SMG6-201ENST00000263073 ATP5JP18859 108 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 TRIP13Q15645 432 aaPredicted RBP13.23□□□□□ -0.29
SMG6-201ENST00000263073 LRRC47Q8N1G4 583 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms