RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 FIBCD1Q8N539 461 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 THAP3Q8WTV1 239 aaPredicted RBP6.7□□□□□ -1.34
CCDC54-201ENST00000261058 BRF1Q92994 677 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 HSPA12BQ96MM6 686 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 SPATA9Q9BWV2 254 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 TRIT1Q9H3H1 467 aaKnown RBP6.7□□□□□ -1.34
CCDC54-201ENST00000261058 ARHGEF4Q9NR80 690 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 GPATCH2Q9NW75 528 aa6.7□□□□□ -1.34
CCDC54-201ENST00000261058 PRNPP04156 253 aa6.69□□□□□ -1.34
CCDC54-201ENST00000261058 INTS5Q6P9B9 1019 aaKnown RBP6.69□□□□□ -1.34
CCDC54-201ENST00000261058 ADAT2Q7Z6V5 191 aaKnown RBP6.69□□□□□ -1.34
CCDC54-201ENST00000261058 WFDC3Q8IUB2 231 aa6.69□□□□□ -1.34
CCDC54-201ENST00000261058 ASCC2Q9H1I8 757 aaPredicted RBP6.69□□□□□ -1.34
CCDC54-201ENST00000261058 KANSL2Q9H9L4 492 aa6.69□□□□□ -1.34
CCDC54-201ENST00000261058 PFDN2Q9UHV9 154 aa6.69□□□□□ -1.34
CCDC54-201ENST00000261058 MINPP1Q9UNW1 487 aa6.69□□□□□ -1.34
CCDC54-201ENST00000261058 TMA7Q9Y2S6 64 aaKnown RBP6.69□□□□□ -1.34
CCDC54-201ENST00000261058 MRPL42Q9Y6G3 142 aaKnown RBP6.69□□□□□ -1.34
CCDC54-201ENST00000261058 KDM2BQ8NHM5 1336 aa6.69□□□□□ -1.34
CCDC54-201ENST00000261058 AGRPO00253 132 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 ENPP3O14638 875 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 GSNP06396 782 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 PRKCQQ04759 706 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 NOL9Q5SY16 702 aaKnown RBP6.68□□□□□ -1.34
CCDC54-201ENST00000261058 CDKAL1Q5VV42 579 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 POMZP3Q6PJE2 187 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 ARHGAP27Q6ZUM4 889 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 TMPRSS7Q7RTY8 843 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 CRACR2BQ8N4Y2 399 aaPredicted RBP6.68□□□□□ -1.34
CCDC54-201ENST00000261058 ZBTB38Q8NAP3 1195 aaPredicted RBP6.68□□□□□ -1.34
CCDC54-201ENST00000261058 LRRN4CLQ8ND94 238 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 ADCY4Q8NFM4 1077 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 SH3TC2Q8TF17 1288 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 MISP3Q96FF7 219 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 TCTN2Q96GX1 697 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 NOL6Q9H6R4 1146 aaKnown RBP6.68□□□□□ -1.34
CCDC54-201ENST00000261058 TMEM260Q9NX78 707 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 VAV3Q9UKW4 847 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 AKT3Q9Y243 479 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 ZNF281Q9Y2X9 895 aa6.68□□□□□ -1.34
CCDC54-201ENST00000261058 WASH4PA8MWX3 477 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 KIAA1324LA8MWY0 1029 aaPredicted RBP6.67□□□□□ -1.34
CCDC54-201ENST00000261058 H0Y8X5 98 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 H3BS24 57 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 TBX1O43435 398 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 BMP8BP34820 402 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 CD97P48960 835 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 PPP2R2AP63151 447 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 SQSTM1Q13501 440 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 ZC3H12BQ5HYM0 836 aaKnown RBP6.67□□□□□ -1.34
CCDC54-201ENST00000261058 LINC00116Q8NCU8 138 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 HRASLS5Q96KN8 279 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 LGR4Q9BXB1 951 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 SUGT1Q9Y2Z0 365 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 SF3B6Q9Y3B4 125 aaKnown RBP6.67□□□□□ -1.34
CCDC54-201ENST00000261058 SHROOM4Q9ULL8 1493 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 SMARCA5O60264 1052 aaPredicted RBP6.67□□□□□ -1.34
CCDC54-201ENST00000261058 COBLO75128 1261 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 MED26O95402 600 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 ESR1P03372 595 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 FAM153BP0C7A2 387 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 FGFR1P11362 822 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 SPINK2P20155 84 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 TPP2P29144 1249 aaPredicted RBP6.67□□□□□ -1.34
CCDC54-201ENST00000261058 GRIK1P39086 918 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 CYP4F3Q08477 520 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 DTX1Q86Y01 620 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 USHBP1Q8N6Y0 703 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 ASB11Q8WXH4 323 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 UBE2FQ969M7 185 aa6.67□□□□□ -1.34
CCDC54-201ENST00000261058 BSDC1Q9NW68 430 aaPredicted RBP6.67□□□□□ -1.34
CCDC54-201ENST00000261058 NOP56O00567 594 aaKnown RBP6.66□□□□□ -1.34
CCDC54-201ENST00000261058 ZNF205O95201 554 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 SCG5P05408 212 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 HSP90AA2PQ14568 343 aaPredicted RBP6.66□□□□□ -1.34
CCDC54-201ENST00000261058 CLEC16AQ2KHT3 1053 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 GTF2IRD2BQ6EKJ0 949 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 SDE2Q6IQ49 451 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 CRTC3Q6UUV7 619 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 NFXL1Q6ZNB6 911 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 GTF2IRD2Q86UP8 949 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 BCL7CQ8WUZ0 217 aaPredicted RBP6.66□□□□□ -1.34
CCDC54-201ENST00000261058 MCMBPQ9BTE3 642 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 AARSD1Q9BTE6 412 aaKnown RBP6.66□□□□□ -1.34
CCDC54-201ENST00000261058 DSCC1Q9BVC3 393 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 NKX2-4Q9H2Z4 354 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 ATP13A1Q9HD20 1204 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 ZSWIM5Q9P217 1185 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 PTCH2Q9Y6C5 1203 aa6.66□□□□□ -1.34
CCDC54-201ENST00000261058 VAV1P15498 845 aa6.65□□□□□ -1.35
CCDC54-201ENST00000261058 GRIA2P42262 883 aa6.65□□□□□ -1.35
CCDC54-201ENST00000261058 PPP2R5DQ14738 602 aa6.65□□□□□ -1.35
CCDC54-201ENST00000261058 TMEM67Q5HYA8 995 aa6.65□□□□□ -1.35
CCDC54-201ENST00000261058 FOXB2Q5VYV0 432 aa6.65□□□□□ -1.35
CCDC54-201ENST00000261058 STK11IPQ8N1F8 1099 aa6.65□□□□□ -1.35
CCDC54-201ENST00000261058 ZSWIM2Q8NEG5 633 aa6.65□□□□□ -1.35
CCDC54-201ENST00000261058 KISS1RQ969F8 398 aaPredicted RBP6.65□□□□□ -1.35
CCDC54-201ENST00000261058 C1orf159Q96HA4 380 aa6.65□□□□□ -1.35
CCDC54-201ENST00000261058 SLC12A9Q9BXP2 914 aa6.65□□□□□ -1.35
CCDC54-201ENST00000261058 CYP26B1Q9NR63 512 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms