RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 HIRAP54198 1017 aaPredicted RBP4.22□□□□□ -1.73
UFM1-201ENST00000239878 NCOA4Q13772 614 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 DOK7Q18PE1 504 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 ZSCAN23Q3MJ62 389 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 CCDC102BQ68D86 513 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 ARHGAP27Q6ZUM4 889 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 CCDC91Q7Z6B0 441 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 MKL1Q969V6 931 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 GCC1Q96CN9 775 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 XAGE2Q96GT9 111 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 DUSP9Q99956 384 aaKnown RBP4.22□□□□□ -1.73
UFM1-201ENST00000239878 RNF181Q9P0P0 153 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 CNTNAP1P78357 1384 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 PPIP5K2O43314 1243 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 PRPF40AO75400 957 aaKnown RBP4.22□□□□□ -1.73
UFM1-201ENST00000239878 FAM163BP0C2L3 166 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 SKIP12755 728 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 ATP5JP18859 108 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 GNALP38405 381 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 PHKA1P46020 1223 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 GJA8P48165 433 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 GPR162Q16538 588 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 CASC1Q6TDU7 716 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 CCAR1Q8IX12 1150 aaKnown RBP4.22□□□□□ -1.73
UFM1-201ENST00000239878 ZNF784Q8NCA9 323 aaPredicted RBP4.22□□□□□ -1.73
UFM1-201ENST00000239878 GPT2Q8TD30 523 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 KIF1BPQ96EK5 621 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 MPHOSPH8Q99549 860 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 AKAP2Q9Y2D5 859 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 COMMD10Q9Y6G5 202 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 MYH2Q9UKX2 1941 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 A0A0G2JMZ2 1700 aa4.22□□□□□ -1.73
UFM1-201ENST00000239878 SHTN1A0MZ66 631 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 K7ELQ4 463 aaPredicted RBP4.21□□□□□ -1.73
UFM1-201ENST00000239878 COQ9O75208 318 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 SLC5A1P13866 664 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 GYG1P46976 350 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 MAP3K10Q02779 954 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 CHAF1AQ13111 956 aaPredicted RBP4.21□□□□□ -1.73
UFM1-201ENST00000239878 NR1H3Q13133 447 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 RAB3GAP1Q15042 981 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 KLHL40Q2TBA0 621 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 MUM1L1Q5H9M0 696 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 METTL24Q5JXM2 366 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 CAVIN1Q6NZI2 390 aaKnown RBP4.21□□□□□ -1.73
UFM1-201ENST00000239878 RINLQ6ZS11 566 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 ZNF804AQ7Z570 1209 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 NIM1KQ8IY84 436 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 FAM184AQ8NB25 1140 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 RELTQ969Z4 430 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 HAUS7Q99871 368 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 TAF1DQ9H5J8 278 aaPredicted RBP4.21□□□□□ -1.73
UFM1-201ENST00000239878 TTC12Q9H892 705 aaPredicted RBP4.21□□□□□ -1.73
UFM1-201ENST00000239878 SPTLC3Q9NUV7 552 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 HMG20BQ9P0W2 317 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 KIAA1024Q9UPX6 916 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 PRKAB1Q9Y478 270 aa4.21□□□□□ -1.73
UFM1-201ENST00000239878 DDX49Q9Y6V7 483 aaKnown RBP4.21□□□□□ -1.73
UFM1-201ENST00000239878 TTC41PQ6P2S7 1318 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 DOCK1Q14185 1865 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 KIF4AO95239 1232 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 EGFRP00533 1210 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 HIBADHP31937 336 aaKnown RBP4.21□□□□□ -1.74
UFM1-201ENST00000239878 BCAMP50895 628 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 KCNH2Q12809 1159 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 MYBPC2Q14324 1141 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 VARS2Q5ST30 1063 aaKnown RBP4.21□□□□□ -1.74
UFM1-201ENST00000239878 NAIF1Q69YI7 327 aaPredicted RBP4.21□□□□□ -1.74
UFM1-201ENST00000239878 SLF2Q8IX21 1173 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 SIX5Q8N196 739 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 ZDHHC15Q96MV8 337 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 GBP4Q96PP9 640 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 DBNDD2Q9BQY9 259 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 NSFL1CQ9UNZ2 370 aaKnown RBP4.21□□□□□ -1.74
UFM1-201ENST00000239878 EXOC6BQ9Y2D4 811 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 GOLGA6L6A8MZA4 724 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 C3orf80F5H4A9 247 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 H0YHG0 523 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 FOXP2O15409 715 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 HMMRO75330 724 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 ITGBL1O95965 494 aaPredicted RBP4.21□□□□□ -1.74
UFM1-201ENST00000239878 CYP2E1P05181 493 aaPredicted RBP4.21□□□□□ -1.74
UFM1-201ENST00000239878 PAX7P23759 505 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 MAP2K2P36507 400 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 GMPSP49915 693 aaPredicted RBP4.21□□□□□ -1.74
UFM1-201ENST00000239878 SARNPP82979 210 aaKnown RBP4.21□□□□□ -1.74
UFM1-201ENST00000239878 TTC31Q49AM3 519 aaPredicted RBP4.21□□□□□ -1.74
UFM1-201ENST00000239878 KMT5BQ4FZB7 885 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 CIAPIN1Q6FI81 312 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 CCSAPQ6IQ19 270 aaPredicted RBP4.21□□□□□ -1.74
UFM1-201ENST00000239878 TRAF7Q6Q0C0 670 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 USP50Q70EL3 339 aaPredicted RBP4.21□□□□□ -1.74
UFM1-201ENST00000239878 PCGF5Q86SE9 256 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 SRLQ86TD4 932 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 PDCD7Q8N8D1 485 aaKnown RBP4.21□□□□□ -1.74
UFM1-201ENST00000239878 HLA-CQ95604 372 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 PURBQ96QR8 312 aaKnown RBP4.21□□□□□ -1.74
UFM1-201ENST00000239878 APBA2Q99767 749 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 DEF6Q9H4E7 631 aa4.21□□□□□ -1.74
UFM1-201ENST00000239878 DBNDD1Q9H9R9 158 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms