RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 EPS15P42566 896 aa17.47■□□□□ 0.39
HDHD3-201ENST00000238379 SLC1A4P43007 532 aa17.47■□□□□ 0.39
HDHD3-201ENST00000238379 MTMR8Q96EF0 704 aa17.47■□□□□ 0.39
HDHD3-201ENST00000238379 ZMYND12Q9H0C1 365 aa17.47■□□□□ 0.39
HDHD3-201ENST00000238379 GOLPH3LQ9H4A5 285 aa17.47■□□□□ 0.39
HDHD3-201ENST00000238379 RNF181Q9P0P0 153 aa17.47■□□□□ 0.39
HDHD3-201ENST00000238379 hCG_1984214I3L0E3 225 aa17.46■□□□□ 0.39
HDHD3-201ENST00000238379 NDUFB10O96000 172 aa17.46■□□□□ 0.39
HDHD3-201ENST00000238379 MARCKSP29966 332 aaPredicted RBP17.46■□□□□ 0.39
HDHD3-201ENST00000238379 LRSAM1Q6UWE0 723 aa17.46■□□□□ 0.39
HDHD3-201ENST00000238379 ZNF713Q8N859 430 aaPredicted RBP17.46■□□□□ 0.39
HDHD3-201ENST00000238379 DDX19AQ9NUU7 478 aaKnown RBP17.46■□□□□ 0.39
HDHD3-201ENST00000238379 TMX2Q9Y320 296 aa17.46■□□□□ 0.39
HDHD3-201ENST00000238379 PNMA6FA0A0J9YX94 578 aa17.45■□□□□ 0.38
HDHD3-201ENST00000238379 RAD21O60216 631 aa17.45■□□□□ 0.38
HDHD3-201ENST00000238379 DDNO94850 711 aaPredicted RBP17.45■□□□□ 0.38
HDHD3-201ENST00000238379 LETM1O95202 739 aaPredicted RBP17.45■□□□□ 0.38
HDHD3-201ENST00000238379 ECE1P42892 770 aa17.45■□□□□ 0.38
HDHD3-201ENST00000238379 HIRAP54198 1017 aaPredicted RBP17.45■□□□□ 0.38
HDHD3-201ENST00000238379 NAPAP54920 295 aa17.45■□□□□ 0.38
HDHD3-201ENST00000238379 ANGEL2Q5VTE6 544 aaKnown RBP17.45■□□□□ 0.38
HDHD3-201ENST00000238379 JMYQ8N9B5 988 aa17.45■□□□□ 0.38
HDHD3-201ENST00000238379 ENGASEQ8NFI3 743 aa17.45■□□□□ 0.38
HDHD3-201ENST00000238379 ACER1Q8TDN7 264 aa17.45■□□□□ 0.38
HDHD3-201ENST00000238379 CCDC12Q8WUD4 166 aaPredicted RBP17.45■□□□□ 0.38
HDHD3-201ENST00000238379 ARHGEF10LQ9HCE6 1279 aa17.45■□□□□ 0.38
HDHD3-201ENST00000238379 UTRNP46939 3433 aa17.45■□□□□ 0.38
HDHD3-201ENST00000238379 SRCAPQ6ZRS2 3230 aa17.45■□□□□ 0.38
HDHD3-201ENST00000238379 SNW1Q13573 536 aaKnown RBP17.44■□□□□ 0.38
HDHD3-201ENST00000238379 FSIP1Q8NA03 581 aa17.44■□□□□ 0.38
HDHD3-201ENST00000238379 NOL7Q9UMY1 257 aaKnown RBP17.44■□□□□ 0.38
HDHD3-201ENST00000238379 ESYT2A0FGR8 921 aa17.44■□□□□ 0.38
HDHD3-201ENST00000238379 TRIM75PA6NK02 468 aa17.44■□□□□ 0.38
HDHD3-201ENST00000238379 USP17L10C9JJH3 530 aa17.44■□□□□ 0.38
HDHD3-201ENST00000238379 WNT7AO00755 349 aa17.44■□□□□ 0.38
HDHD3-201ENST00000238379 PPP1R11O60927 126 aaPredicted RBP17.44■□□□□ 0.38
HDHD3-201ENST00000238379 ASNSP08243 561 aa17.44■□□□□ 0.38
HDHD3-201ENST00000238379 ATP2B1P20020 1258 aa17.44■□□□□ 0.38
HDHD3-201ENST00000238379 NBPF12Q5TAG4 269 aaPredicted RBP17.44■□□□□ 0.38
HDHD3-201ENST00000238379 PIK3AP1Q6ZUJ8 805 aa17.44■□□□□ 0.38
HDHD3-201ENST00000238379 APOBEC3FQ8IUX4 373 aaKnown RBP17.44■□□□□ 0.38
HDHD3-201ENST00000238379 MRPS27Q92552 414 aaKnown RBP17.44■□□□□ 0.38
HDHD3-201ENST00000238379 NUP88Q99567 741 aaPredicted RBP17.44■□□□□ 0.38
HDHD3-201ENST00000238379 NUP62CLQ9H1M0 184 aa17.44■□□□□ 0.38
HDHD3-201ENST00000238379 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.44■□□□□ 0.38
HDHD3-201ENST00000238379 PCDHA6Q9UN73 950 aa17.44■□□□□ 0.38
HDHD3-201ENST00000238379 PCDHA8Q9Y5H6 950 aa17.44■□□□□ 0.38
HDHD3-201ENST00000238379 SMCO2A6NFE2 343 aa17.43■□□□□ 0.38
HDHD3-201ENST00000238379 ZBTB5O15062 677 aa17.43■□□□□ 0.38
HDHD3-201ENST00000238379 CMA1P23946 247 aa17.43■□□□□ 0.38
HDHD3-201ENST00000238379 TRAPPC10P48553 1259 aa17.43■□□□□ 0.38
HDHD3-201ENST00000238379 FAM160A1Q05DH4 1040 aa17.43■□□□□ 0.38
HDHD3-201ENST00000238379 C9orf131Q5VYM1 1079 aa17.43■□□□□ 0.38
HDHD3-201ENST00000238379 CCDC73Q6ZRK6 1079 aa17.43■□□□□ 0.38
HDHD3-201ENST00000238379 RASGRP4Q8TDF6 673 aa17.43■□□□□ 0.38
HDHD3-201ENST00000238379 CLSTN2Q9H4D0 955 aa17.43■□□□□ 0.38
HDHD3-201ENST00000238379 CEP131Q9UPN4 1083 aa17.43■□□□□ 0.38
HDHD3-201ENST00000238379 MORC2Q9Y6X9 1032 aaPredicted RBP17.43■□□□□ 0.38
HDHD3-201ENST00000238379 BMP3P12645 472 aa17.42■□□□□ 0.38
HDHD3-201ENST00000238379 KIAA1755Q5JYT7 1200 aa17.42■□□□□ 0.38
HDHD3-201ENST00000238379 FMR1NBQ8N0W7 255 aaPredicted RBP17.42■□□□□ 0.38
HDHD3-201ENST00000238379 COA7Q96BR5 231 aa17.42■□□□□ 0.38
HDHD3-201ENST00000238379 C6orf50Q9HD87 102 aa17.42■□□□□ 0.38
HDHD3-201ENST00000238379 GGA3Q9NZ52 723 aa17.42■□□□□ 0.38
HDHD3-201ENST00000238379 A0A1B0GVL5 298 aa17.42■□□□□ 0.38
HDHD3-201ENST00000238379 CUTAO60888 179 aa17.42■□□□□ 0.38
HDHD3-201ENST00000238379 PTPREP23469 700 aa17.42■□□□□ 0.38
HDHD3-201ENST00000238379 GNA11P29992 359 aa17.42■□□□□ 0.38
HDHD3-201ENST00000238379 CAMK4Q16566 473 aa17.42■□□□□ 0.38
HDHD3-201ENST00000238379 TTC38Q5R3I4 469 aa17.42■□□□□ 0.38
HDHD3-201ENST00000238379 SHC4Q6S5L8 630 aa17.42■□□□□ 0.38
HDHD3-201ENST00000238379 BTNL9Q6UXG8 535 aa17.42■□□□□ 0.38
HDHD3-201ENST00000238379 GRPEL1Q9HAV7 217 aa17.42■□□□□ 0.38
HDHD3-201ENST00000238379 FBXO2Q9UK22 296 aaPredicted RBP17.42■□□□□ 0.38
HDHD3-201ENST00000238379 CTNND1O60716 968 aaKnown RBP17.41■□□□□ 0.38
HDHD3-201ENST00000238379 MRE11P49959 708 aa17.41■□□□□ 0.38
HDHD3-201ENST00000238379 NDUFA8P51970 172 aa17.41■□□□□ 0.38
HDHD3-201ENST00000238379 L1TD1Q5T7N2 865 aaKnown RBP17.41■□□□□ 0.38
HDHD3-201ENST00000238379 SPICE1Q8N0Z3 855 aa17.41■□□□□ 0.38
HDHD3-201ENST00000238379 KRI1Q8N9T8 703 aaKnown RBP17.41■□□□□ 0.38
HDHD3-201ENST00000238379 CLIC6Q96NY7 704 aa17.41■□□□□ 0.38
HDHD3-201ENST00000238379 GOPCQ9HD26 462 aa17.41■□□□□ 0.38
HDHD3-201ENST00000238379 GINM1Q9NU53 330 aa17.41■□□□□ 0.38
HDHD3-201ENST00000238379 CCDC194A0A1B0GVG4 234 aa17.4■□□□□ 0.38
HDHD3-201ENST00000238379 TMEM232C9JQI7 657 aa17.4■□□□□ 0.38
HDHD3-201ENST00000238379 BMP15O95972 392 aa17.4■□□□□ 0.38
HDHD3-201ENST00000238379 PPP1R18Q6NYC8 613 aa17.4■□□□□ 0.38
HDHD3-201ENST00000238379 RBM43Q6ZSC3 357 aaKnown RBP17.4■□□□□ 0.38
HDHD3-201ENST00000238379 CCDC84Q86UT8 332 aaPredicted RBP17.4■□□□□ 0.38
HDHD3-201ENST00000238379 GLIS2Q9BZE0 524 aaPredicted RBP17.4■□□□□ 0.38
HDHD3-201ENST00000238379 TNMDQ9H2S6 317 aa17.4■□□□□ 0.38
HDHD3-201ENST00000238379 VCPKMTQ9H867 229 aa17.4■□□□□ 0.38
HDHD3-201ENST00000238379 SRPRBQ9Y5M8 271 aaKnown RBP17.4■□□□□ 0.38
HDHD3-201ENST00000238379 MRVI1Q9Y6F6 885 aa17.4■□□□□ 0.38
HDHD3-201ENST00000238379 FAM237AA0A1B0GTK4 181 aa17.4■□□□□ 0.38
HDHD3-201ENST00000238379 ZNF174Q15697 407 aa17.4■□□□□ 0.38
HDHD3-201ENST00000238379 QRICH1Q2TAL8 776 aa17.4■□□□□ 0.38
HDHD3-201ENST00000238379 SYDE2Q5VT97 1194 aa17.4■□□□□ 0.38
HDHD3-201ENST00000238379 PRAMEF18Q5VWM3 479 aa17.4■□□□□ 0.38
HDHD3-201ENST00000238379 RESP18Q5W5W9 173 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms