RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 ARAP2Q8WZ64 1704 aa17.42■□□□□ 0.38
DDX55-201ENST00000238146 RPGRIP1Q96KN7 1286 aa17.42■□□□□ 0.38
DDX55-201ENST00000238146 MYBL2P10244 700 aa17.42■□□□□ 0.38
DDX55-201ENST00000238146 CYP7A1P22680 504 aa17.42■□□□□ 0.38
DDX55-201ENST00000238146 PMS1P54277 932 aaKnown RBP17.42■□□□□ 0.38
DDX55-201ENST00000238146 ZNF662Q6ZS27 426 aa17.42■□□□□ 0.38
DDX55-201ENST00000238146 TMTC3Q6ZXV5 915 aa17.42■□□□□ 0.38
DDX55-201ENST00000238146 ADSSL1Q8N142 457 aa17.42■□□□□ 0.38
DDX55-201ENST00000238146 JAKMIP2Q96AA8 810 aa17.42■□□□□ 0.38
DDX55-201ENST00000238146 LRP5O75197 1615 aa17.42■□□□□ 0.38
DDX55-201ENST00000238146 GGCXP38435 758 aa17.41■□□□□ 0.38
DDX55-201ENST00000238146 TSR1Q2NL82 804 aaKnown RBP17.41■□□□□ 0.38
DDX55-201ENST00000238146 LACRTQ9GZZ8 138 aa17.41■□□□□ 0.38
DDX55-201ENST00000238146 RCCD1A6NED2 376 aa17.41■□□□□ 0.38
DDX55-201ENST00000238146 AGPSO00116 658 aa17.41■□□□□ 0.38
DDX55-201ENST00000238146 PES1O00541 588 aaKnown RBP17.41■□□□□ 0.38
DDX55-201ENST00000238146 ADAMTS3O15072 1205 aa17.41■□□□□ 0.38
DDX55-201ENST00000238146 KRT83P78385 493 aa17.41■□□□□ 0.38
DDX55-201ENST00000238146 CKAP4Q07065 602 aaKnown RBP17.41■□□□□ 0.38
DDX55-201ENST00000238146 MEA1Q16626 185 aa17.41■□□□□ 0.38
DDX55-201ENST00000238146 CTR9Q6PD62 1173 aa17.41■□□□□ 0.38
DDX55-201ENST00000238146 GSPT2Q8IYD1 628 aaKnown RBP17.41■□□□□ 0.38
DDX55-201ENST00000238146 CARD10Q9BWT7 1032 aa17.41■□□□□ 0.38
DDX55-201ENST00000238146 GNL3LQ9NVN8 582 aaKnown RBP17.41■□□□□ 0.38
DDX55-201ENST00000238146 CYP2D7A0A087X1C5 515 aa17.4■□□□□ 0.38
DDX55-201ENST00000238146 PDE2AO00408 941 aaPredicted RBP17.4■□□□□ 0.38
DDX55-201ENST00000238146 KRT86O43790 486 aa17.4■□□□□ 0.38
DDX55-201ENST00000238146 TRAPPC10P48553 1259 aa17.4■□□□□ 0.38
DDX55-201ENST00000238146 TTC31Q49AM3 519 aaPredicted RBP17.4■□□□□ 0.38
DDX55-201ENST00000238146 CCNI2Q6ZMN8 369 aaPredicted RBP17.4■□□□□ 0.38
DDX55-201ENST00000238146 KIAA1328Q86T90 577 aa17.4■□□□□ 0.38
DDX55-201ENST00000238146 SMARCC1Q92922 1105 aaPredicted RBP17.4■□□□□ 0.38
DDX55-201ENST00000238146 CNTNAP5Q8WYK1 1306 aa17.4■□□□□ 0.38
DDX55-201ENST00000238146 SHANK3Q9BYB0 1731 aa17.4■□□□□ 0.38
DDX55-201ENST00000238146 ZNF185O15231 689 aa17.4■□□□□ 0.38
DDX55-201ENST00000238146 EEF1GP26641 437 aaKnown RBP17.4■□□□□ 0.38
DDX55-201ENST00000238146 SRBD1Q8N5C6 995 aaKnown RBP17.4■□□□□ 0.38
DDX55-201ENST00000238146 EHBP1Q8NDI1 1231 aa17.4■□□□□ 0.38
DDX55-201ENST00000238146 SELENOOQ9BVL4 669 aa17.4■□□□□ 0.38
DDX55-201ENST00000238146 PDS5AQ29RF7 1337 aaKnown RBP17.4■□□□□ 0.38
DDX55-201ENST00000238146 TOGARAM1Q9Y4F4 1720 aa17.4■□□□□ 0.38
DDX55-201ENST00000238146 COL5A2P05997 1499 aaPredicted RBP17.39■□□□□ 0.38
DDX55-201ENST00000238146 VEGFAP15692 232 aaPredicted RBP17.39■□□□□ 0.37
DDX55-201ENST00000238146 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.39■□□□□ 0.37
DDX55-201ENST00000238146 CRACR2AQ9BSW2 395 aa17.39■□□□□ 0.37
DDX55-201ENST00000238146 AGPAT5Q9NUQ2 364 aa17.39■□□□□ 0.37
DDX55-201ENST00000238146 ZBTB1Q9Y2K1 713 aa17.39■□□□□ 0.37
DDX55-201ENST00000238146 MYH2Q9UKX2 1941 aa17.39■□□□□ 0.37
DDX55-201ENST00000238146 MAGEB6P1A0A0J9YX57 407 aa17.39■□□□□ 0.37
DDX55-201ENST00000238146 CALM1P0DP23 149 aa17.39■□□□□ 0.37
DDX55-201ENST00000238146 CALM2P0DP24 149 aa17.39■□□□□ 0.37
DDX55-201ENST00000238146 CALM3P0DP25 149 aa17.39■□□□□ 0.37
DDX55-201ENST00000238146 CYP19A1P11511 503 aaPredicted RBP17.39■□□□□ 0.37
DDX55-201ENST00000238146 NLRP5P59047 1200 aa17.39■□□□□ 0.37
DDX55-201ENST00000238146 IQCA1Q86XH1 822 aa17.39■□□□□ 0.37
DDX55-201ENST00000238146 PPM1EQ8WY54 764 aa17.39■□□□□ 0.37
DDX55-201ENST00000238146 STAT6P42226 847 aa17.38■□□□□ 0.37
DDX55-201ENST00000238146 DNAJC21Q5F1R6 531 aaKnown RBP17.38■□□□□ 0.37
DDX55-201ENST00000238146 C4orf32Q8N8J7 132 aa17.38■□□□□ 0.37
DDX55-201ENST00000238146 SLC4A9Q96Q91 983 aa17.38■□□□□ 0.37
DDX55-201ENST00000238146 TTYH3Q9C0H2 523 aa17.38■□□□□ 0.37
DDX55-201ENST00000238146 THAP9Q9H5L6 903 aa17.38■□□□□ 0.37
DDX55-201ENST00000238146 IQSEC3Q9UPP2 1182 aaPredicted RBP17.38■□□□□ 0.37
DDX55-201ENST00000238146 DUSP10Q9Y6W6 482 aa17.38■□□□□ 0.37
DDX55-201ENST00000238146 BAZ2BQ9UIF8 2168 aaKnown RBP17.38■□□□□ 0.37
DDX55-201ENST00000238146 SHOX2O60902 331 aaPredicted RBP17.38■□□□□ 0.37
DDX55-201ENST00000238146 LONP1P36776 959 aaKnown RBP17.38■□□□□ 0.37
DDX55-201ENST00000238146 ARL6IP4Q66PJ3 421 aaKnown RBP17.38■□□□□ 0.37
DDX55-201ENST00000238146 ZNF34Q8IZ26 560 aa17.38■□□□□ 0.37
DDX55-201ENST00000238146 CAGE1Q8TC20 777 aa17.38■□□□□ 0.37
DDX55-201ENST00000238146 MYH13Q9UKX3 1938 aa17.38■□□□□ 0.37
DDX55-201ENST00000238146 PLCH1Q4KWH8 1693 aa17.38■□□□□ 0.37
DDX55-201ENST00000238146 ANO9A1A5B4 782 aa17.37■□□□□ 0.37
DDX55-201ENST00000238146 RASSF10A6NK89 507 aa17.37■□□□□ 0.37
DDX55-201ENST00000238146 DDAH1O94760 285 aa17.37■□□□□ 0.37
DDX55-201ENST00000238146 SRGNP10124 158 aa17.37■□□□□ 0.37
DDX55-201ENST00000238146 SCG2P13521 617 aa17.37■□□□□ 0.37
DDX55-201ENST00000238146 CYLC1P35663 651 aaPredicted RBP17.37■□□□□ 0.37
DDX55-201ENST00000238146 DNM2P50570 870 aa17.37■□□□□ 0.37
DDX55-201ENST00000238146 NAALADL2Q58DX5 795 aa17.37■□□□□ 0.37
DDX55-201ENST00000238146 RIOK1Q9BRS2 568 aaKnown RBP17.37■□□□□ 0.37
DDX55-201ENST00000238146 NHEJ1Q9H9Q4 299 aaPredicted RBP17.37■□□□□ 0.37
DDX55-201ENST00000238146 ABCF2Q9UG63 623 aa17.37■□□□□ 0.37
DDX55-201ENST00000238146 B4DLN1 442 aa17.37■□□□□ 0.37
DDX55-201ENST00000238146 SKIDA1Q1XH10 827 aa17.37■□□□□ 0.37
DDX55-201ENST00000238146 TRIM47Q96LD4 638 aa17.37■□□□□ 0.37
DDX55-201ENST00000238146 PURBQ96QR8 312 aaKnown RBP17.37■□□□□ 0.37
DDX55-201ENST00000238146 DISC1Q9NRI5 854 aa17.37■□□□□ 0.37
DDX55-201ENST00000238146 ANKRD36CQ5JPF3 1778 aa17.37■□□□□ 0.37
DDX55-201ENST00000238146 C2orf54Q08AI8 447 aa17.36■□□□□ 0.37
DDX55-201ENST00000238146 ICE2Q659A1 982 aa17.36■□□□□ 0.37
DDX55-201ENST00000238146 DUOX1Q9NRD9 1551 aa17.36■□□□□ 0.37
DDX55-201ENST00000238146 ERVV-1B6SEH8 477 aa17.36■□□□□ 0.37
DDX55-201ENST00000238146 KLRC4O43908 158 aa17.36■□□□□ 0.37
DDX55-201ENST00000238146 FGRP09769 529 aa17.36■□□□□ 0.37
DDX55-201ENST00000238146 IDEP14735 1019 aa17.36■□□□□ 0.37
DDX55-201ENST00000238146 KLK7P49862 253 aa17.36■□□□□ 0.37
DDX55-201ENST00000238146 KCNB1Q14721 858 aa17.36■□□□□ 0.37
DDX55-201ENST00000238146 TTI2Q6NXR4 508 aa17.36■□□□□ 0.37
DDX55-201ENST00000238146 DZIP3Q86Y13 1208 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms