RNA–Protein interactions for RNA: ENST00000222266.2

PSENEN-201, Transcript of presenilin enhancer, gamma-secretase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSENEN, Length 603 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSENEN-201ENST00000222266 WDR78Q5VTH9 848 aa11.86□□□□□ -0.51
PSENEN-201ENST00000222266 Q6ZUG5 572 aa11.86□□□□□ -0.51
PSENEN-201ENST00000222266 KCTD1Q719H9 257 aa11.86□□□□□ -0.51
PSENEN-201ENST00000222266 NUP88Q99567 741 aaPredicted RBP11.86□□□□□ -0.51
PSENEN-201ENST00000222266 TEX13BQ9BXU2 312 aa11.86□□□□□ -0.51
PSENEN-201ENST00000222266 BACH2Q9BYV9 841 aa11.86□□□□□ -0.51
PSENEN-201ENST00000222266 MROH8Q9H579 483 aa11.86□□□□□ -0.51
PSENEN-201ENST00000222266 LY9Q9HBG7 655 aa11.86□□□□□ -0.51
PSENEN-201ENST00000222266 MORF4L1Q9UBU8 362 aa11.86□□□□□ -0.51
PSENEN-201ENST00000222266 SEC63Q9UGP8 760 aaKnown RBP11.86□□□□□ -0.51
PSENEN-201ENST00000222266 THSD7BQ9C0I4 1608 aa11.86□□□□□ -0.51
PSENEN-201ENST00000222266 KLF18A0A0U1RQI7 1052 aa11.85□□□□□ -0.51
PSENEN-201ENST00000222266 SPDYE16A6NNV3 312 aaPredicted RBP11.85□□□□□ -0.51
PSENEN-201ENST00000222266 TNPO2O14787 897 aaKnown RBP11.85□□□□□ -0.51
PSENEN-201ENST00000222266 CPLX1O14810 134 aa11.85□□□□□ -0.51
PSENEN-201ENST00000222266 STRNO43815 780 aa11.85□□□□□ -0.51
PSENEN-201ENST00000222266 SNHG28P0DPA3 235 aa11.85□□□□□ -0.51
PSENEN-201ENST00000222266 SMARCA1P28370 1054 aa11.85□□□□□ -0.51
PSENEN-201ENST00000222266 STAT3P40763 770 aa11.85□□□□□ -0.51
PSENEN-201ENST00000222266 RBM25P49756 843 aaKnown RBP11.85□□□□□ -0.51
PSENEN-201ENST00000222266 NEK4P51957 841 aa11.85□□□□□ -0.51
PSENEN-201ENST00000222266 LBX1P52954 281 aa11.85□□□□□ -0.51
PSENEN-201ENST00000222266 ANTXR2P58335 489 aa11.85□□□□□ -0.51
PSENEN-201ENST00000222266 ERVK-9P63128 1117 aa11.85□□□□□ -0.51
PSENEN-201ENST00000222266 ERVK-24P63145 666 aa11.85□□□□□ -0.51
PSENEN-201ENST00000222266 RABEP1Q15276 862 aa11.85□□□□□ -0.51
PSENEN-201ENST00000222266 BTNL9Q6UXG8 535 aa11.85□□□□□ -0.51
PSENEN-201ENST00000222266 SHCBP1Q8NEM2 672 aa11.85□□□□□ -0.51
PSENEN-201ENST00000222266 BRF1Q92994 677 aa11.85□□□□□ -0.51
PSENEN-201ENST00000222266 ALDH8A1Q9H2A2 487 aaPredicted RBP11.85□□□□□ -0.51
PSENEN-201ENST00000222266 EFCC1Q9HA90 598 aa11.85□□□□□ -0.51
PSENEN-201ENST00000222266 RBM27Q9P2N5 1060 aaKnown RBP11.85□□□□□ -0.51
PSENEN-201ENST00000222266 TAF6LQ9Y6J9 622 aa11.85□□□□□ -0.51
PSENEN-201ENST00000222266 FRMPD2Q68DX3 1309 aaPredicted RBP11.85□□□□□ -0.51
PSENEN-201ENST00000222266 GOLGA8AA7E2F4 631 aa11.84□□□□□ -0.51
PSENEN-201ENST00000222266 GOLGA8BA8MQT2 603 aa11.84□□□□□ -0.51
PSENEN-201ENST00000222266 ATP2A1O14983 1001 aa11.84□□□□□ -0.51
PSENEN-201ENST00000222266 CDKL5O76039 1030 aa11.84□□□□□ -0.51
PSENEN-201ENST00000222266 HSPA8P11142 646 aaKnown RBP11.84□□□□□ -0.51
PSENEN-201ENST00000222266 BCRP11274 1271 aa11.84□□□□□ -0.51
PSENEN-201ENST00000222266 PSMC4P43686 418 aa11.84□□□□□ -0.51
PSENEN-201ENST00000222266 MCM2P49736 904 aa11.84□□□□□ -0.51
PSENEN-201ENST00000222266 METAP2P50579 478 aaKnown RBP eCLIP11.84□□□□□ -0.51
PSENEN-201ENST00000222266 LACTBP83111 547 aaPredicted RBP11.84□□□□□ -0.51
PSENEN-201ENST00000222266 DGKZQ13574 1117 aa11.84□□□□□ -0.51
PSENEN-201ENST00000222266 GRM4Q14833 912 aa11.84□□□□□ -0.51
PSENEN-201ENST00000222266 RTN1Q16799 776 aa11.84□□□□□ -0.51
PSENEN-201ENST00000222266 MICU3Q86XE3 530 aa11.84□□□□□ -0.51
PSENEN-201ENST00000222266 FANCBQ8NB91 859 aa11.84□□□□□ -0.51
PSENEN-201ENST00000222266 ZNF296Q8WUU4 475 aaPredicted RBP11.84□□□□□ -0.51
PSENEN-201ENST00000222266 ATG4CQ96DT6 458 aa11.84□□□□□ -0.51
PSENEN-201ENST00000222266 RRP36Q96EU6 259 aaKnown RBP11.84□□□□□ -0.51
PSENEN-201ENST00000222266 ZNF274Q96GC6 653 aaPredicted RBP11.84□□□□□ -0.51
PSENEN-201ENST00000222266 LRRC2Q9BYS8 371 aa11.84□□□□□ -0.51
PSENEN-201ENST00000222266 UPF3BQ9BZI7 483 aaKnown RBP11.84□□□□□ -0.51
PSENEN-201ENST00000222266 MAF1Q9H063 256 aa11.84□□□□□ -0.51
PSENEN-201ENST00000222266 SPATC1LQ9H0A9 340 aa11.84□□□□□ -0.51
PSENEN-201ENST00000222266 SLC38A10Q9HBR0 1119 aa11.84□□□□□ -0.51
PSENEN-201ENST00000222266 PRR12Q9ULL5 1215 aa11.84□□□□□ -0.51
PSENEN-201ENST00000222266 SEC24BO95487 1268 aa11.83□□□□□ -0.52
PSENEN-201ENST00000222266 FCER1AP12319 257 aa11.83□□□□□ -0.52
PSENEN-201ENST00000222266 SLC4A3P48751 1232 aa11.83□□□□□ -0.52
PSENEN-201ENST00000222266 TROAPQ12815 778 aa11.83□□□□□ -0.52
PSENEN-201ENST00000222266 KCTD2Q14681 263 aa11.83□□□□□ -0.52
PSENEN-201ENST00000222266 KIAA1755Q5JYT7 1200 aa11.83□□□□□ -0.52
PSENEN-201ENST00000222266 SNRNP48Q6IEG0 339 aaKnown RBP11.83□□□□□ -0.52
PSENEN-201ENST00000222266 APOA5Q6Q788 366 aa11.83□□□□□ -0.52
PSENEN-201ENST00000222266 PLEKHH3Q7Z736 793 aa11.83□□□□□ -0.52
PSENEN-201ENST00000222266 NCAPG2Q86XI2 1143 aa11.83□□□□□ -0.52
PSENEN-201ENST00000222266 TRMT44Q8IYL2 757 aaKnown RBP11.83□□□□□ -0.52
PSENEN-201ENST00000222266 TRIM22Q8IYM9 498 aa11.83□□□□□ -0.52
PSENEN-201ENST00000222266 CPXCR1Q8N123 301 aa11.83□□□□□ -0.52
PSENEN-201ENST00000222266 CHST13Q8NET6 341 aa11.83□□□□□ -0.52
PSENEN-201ENST00000222266 SOCS4Q8WXH5 440 aa11.83□□□□□ -0.52
PSENEN-201ENST00000222266 MPHOSPH6Q99547 160 aaKnown RBP11.83□□□□□ -0.52
PSENEN-201ENST00000222266 FBXO28Q9NVF7 368 aa11.83□□□□□ -0.52
PSENEN-201ENST00000222266 RBPJLQ9UBG7 517 aa11.83□□□□□ -0.52
PSENEN-201ENST00000222266 TSKSQ9UJT2 592 aa11.83□□□□□ -0.52
PSENEN-201ENST00000222266 ADAMTS5Q9UNA0 930 aa11.83□□□□□ -0.52
PSENEN-201ENST00000222266 CEP350Q5VT06 3117 aa11.82□□□□□ -0.52
PSENEN-201ENST00000222266 PALM3A6NDB9 673 aaPredicted RBP11.82□□□□□ -0.52
PSENEN-201ENST00000222266 B4DLN1 442 aa11.82□□□□□ -0.52
PSENEN-201ENST00000222266 ICAM1P05362 532 aa11.82□□□□□ -0.52
PSENEN-201ENST00000222266 GOLGA8HP0CJ92 632 aa11.82□□□□□ -0.52
PSENEN-201ENST00000222266 SLC16A2P36021 539 aa11.82□□□□□ -0.52
PSENEN-201ENST00000222266 MRPL12P52815 198 aaKnown RBP11.82□□□□□ -0.52
PSENEN-201ENST00000222266 CTU1Q7Z7A3 348 aaKnown RBP11.82□□□□□ -0.52
PSENEN-201ENST00000222266 NBPF11Q86T75 865 aa11.82□□□□□ -0.52
PSENEN-201ENST00000222266 FBXO11Q86XK2 927 aa11.82□□□□□ -0.52
PSENEN-201ENST00000222266 MCF2L2Q86YR7 1114 aa11.82□□□□□ -0.52
PSENEN-201ENST00000222266 RIOX2Q8IUF8 465 aa11.82□□□□□ -0.52
PSENEN-201ENST00000222266 ADGRF4Q8IZF3 695 aa11.82□□□□□ -0.52
PSENEN-201ENST00000222266 ABRAQ8N0Z2 381 aa11.82□□□□□ -0.52
PSENEN-201ENST00000222266 RAET1EQ8TD07 263 aa11.82□□□□□ -0.52
PSENEN-201ENST00000222266 IL17RAQ96F46 866 aa11.82□□□□□ -0.52
PSENEN-201ENST00000222266 DDX11Q96FC9 970 aa11.82□□□□□ -0.52
PSENEN-201ENST00000222266 ZSCAN31Q96LW9 406 aaPredicted RBP11.82□□□□□ -0.52
PSENEN-201ENST00000222266 TCEANC2Q96MN5 208 aa11.82□□□□□ -0.52
PSENEN-201ENST00000222266 NUDT12Q9BQG2 462 aa11.82□□□□□ -0.52
PSENEN-201ENST00000222266 AMNQ9BXJ7 453 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms