RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Xrcc6P23475 608 aa15.23■□□□□ 0.03
Col5a1-201ENSMUST00000028280 A630010A05RikA9C473 232 aa15.23■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Krt4P07744 525 aa15.23■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Ppp2r5dQ91V89 594 aa15.23■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Ccdc182Q9D9C6 152 aa15.23■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Otud7bB2RUR8 840 aa15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Gm17615E9Q9P2 165 aa15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Tubgcp3P58854 905 aa15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Gm5169Q5M8P2 212 aa15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Tcp1P11983 556 aaKnown RBP15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Arhgap17Q3UIA2 846 aa15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Tbc1d9bQ5SVR0 1263 aa15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Haus6Q6NV99 933 aaKnown RBP15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Arhgap10Q6Y5D8 786 aa15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Gna15P30678 374 aa15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 MefvQ9JJ26 767 aa15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Mcf2A2AEU1 1111 aa15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Gnl1P36916 607 aa15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 MaeaQ4VC33 396 aa15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Clec4gQ8BNX1 294 aa15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Pcdhb5Q91XZ5 792 aa15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Lrrc9Q8CDN9 1456 aa15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Trappc8E9PWG2 1437 aa15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 D130040H23RikQ8BII3 405 aa15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Serpinb6Q60854 378 aa15.22■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Prl3d2F6R3P9 224 aa15.21■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Art2bO35975 289 aa15.21■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Flot2Q60634 428 aaKnown RBP15.21■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Desi2Q9D291 194 aa15.21■□□□□ 0.03
Col5a1-201ENSMUST00000028280 PalldQ9ET54 1408 aa15.21■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Gm29094F6Q785 221 aa15.21■□□□□ 0.03
Col5a1-201ENSMUST00000028280 PsdQ5DTT2 1024 aa15.21■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Nlrp4fQ66X05 959 aa15.21■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Ppp2r2cQ8BG02 447 aa15.21■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Lrrd1Q8C0R9 853 aa15.21■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Ncapd2Q8K2Z4 1392 aa15.21■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Prl3d3A0A0M6L0J6 224 aa15.21■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Gm14525B1AZA0 212 aa15.21■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Gm2012B1B0R1 212 aa15.21■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Atg16l1Q8C0J2 607 aa15.21■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Mphosph6Q9D1Q1 161 aa15.21■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Galnt15Q9D2N8 638 aa15.21■□□□□ 0.03
Col5a1-201ENSMUST00000028280 Lrrc8aQ80WG5 810 aa15.21■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Tpcn2Q8BWC0 731 aa15.21■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Rapgef5Q8C0Q9 814 aa15.21■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Rilpl1Q9JJC6 406 aa15.21■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Lmnb2P21619 596 aaKnown RBP15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Casp1P29452 402 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Ano8Q6PB70 1060 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Zfp418Q8BFS8 652 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Sp4Q62445 782 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Cog4Q8R1U1 785 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 MesdQ9ERE7 224 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Atp10dQ8K2X1 1416 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Arhgap4B1AUY3 965 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 G3bp2P97379 482 aaKnown RBP15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Camsap3Q80VC9 1252 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 SympkQ80X82 1284 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Gbp4A4UUI3 631 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 ItkQ03526 625 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Tshz1Q5DTH5 1084 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Lyve1Q8BHC0 318 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Sept10Q8C650 452 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 NonoQ99K48 473 aaKnown RBP15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Ccdc138Q0VF22 680 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Jdp2P97875 163 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Zfp174B9EJW5 407 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Vamp4O70480 141 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Bach2P97303 839 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Map3k10Q66L42 940 aa15.2■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Gm45015A0A140LII9 184 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 HpdP49429 393 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Kpna2P52293 529 aaKnown RBP15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Stx3Q64704 289 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Pram1Q6BCL1 675 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Mtss1lQ6P9S0 715 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Dach2Q925Q8 634 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 ArhgdiaQ99PT1 204 aaKnown RBP15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Zranb2Q9R020 330 aaKnown RBP15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 TsksO54887 585 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Nlrx1Q3TL44 975 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 PrimpolQ6P1E7 537 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Ssh2Q5SW75 1423 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Gm43738A0A0G2JEA5 862 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 SybuQ8BHS8 665 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Arhgap29Q8CGF1 1266 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Aox4Q3TYQ9 1336 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Ftl1P29391 183 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Igflr1Q3U4N7 345 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Gprasp2Q8BUY8 826 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Bag5Q8CI32 447 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 AW822073A0A0N4SUK1 652 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 1700109H08RikQ9D9C0 210 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Scyl2Q8CFE4 930 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 SmtnQ921U8 923 aa15.19■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Cfap70D3YVL2 1141 aa15.18■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Mmp8O70138 465 aa15.18■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Morc2aQ69ZX6 1030 aa15.18■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Gm28961A0A087WPA5 222 aa15.18■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Gm21858A0A087WQ24 222 aa15.18■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms