RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-225	ENST00000636861	PEX19	P40855	299 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	TM4SF4	P48230	202 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	AMPH	P49418	695 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	NLRP6	P59044	892 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	CHMP4BP1	P59074	171 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	MRPS5	P82675	430 aa	Known RBP	4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	AKAP17A	Q02040	695 aa	Known RBP	4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	APBA1	Q02410	837 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	TBC1D8B	Q0IIM8	1120 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	DBN1	Q16643	649 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	SLC9C1	Q4G0N8	1177 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	LRRC23	Q53EV4	343 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	HDGFL1	Q5TGJ6	251 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	FOXD4L5	Q5VV16	416 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	ATL3	Q6DD88	541 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	TTC19	Q6DKK2	380 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	SLC30A9	Q6PML9	568 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	CPLX2	Q6PUV4	134 aa	Known RBP	4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	MPRIP	Q6WCQ1	1025 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	RSRC2	Q7L4I2	434 aa	Known RBP	4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	SRGAP1	Q7Z6B7	1085 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	TRIM74	Q86UV6	250 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	TRIM73	Q86UV7	250 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	RNF168	Q8IYW5	571 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	MSANTD4	Q8NCY6	345 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	MICAL1	Q8TDZ2	1067 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	NUP133	Q8WUM0	1156 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	ZFAND2B	Q8WV99	257 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	C7orf43	Q8WVR3	580 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	ALS2CR12	Q96Q35	445 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	RUFY1	Q96T51	708 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	BPIFA3	Q9BQP9	254 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	PARD6B	Q9BYG5	372 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	UBE2O	Q9C0C9	1292 aa	Known RBP	4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	BICC1	Q9H694	974 aa	Known RBP	4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	PDE11A	Q9HCR9	933 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	GOPC	Q9HD26	462 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	KLC4	Q9NSK0	619 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	TRMT1	Q9NXH9	659 aa	Known RBP	4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	THEG	Q9P2T0	379 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	HOOK1	Q9UJC3	728 aa	Known RBP	4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	KDM2A	Q9Y2K7	1162 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	RTCB	Q9Y3I0	505 aa	Known RBP	4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	MRFAP1	Q9Y605	127 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	TEX15	Q9BXT5	2789 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	LRRC37A2	A6NM11	1700 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	SNED1	Q8TER0	1413 aa		4.54	□□□□□ -1.68
CHD2-225	ENST00000636861	DNHD1	Q96M86	4753 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	SPTAN1	Q13813	2472 aa	Known RBP	4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	RELN	P78509	3460 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	GOLGA6C	A6NDK9	693 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	PRR33	A8MZF0	331 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861		H3BQF6	201 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861		H7C1W4	665 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	MEFV	O15553	781 aa	Predicted RBP	4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	GFRA3	O60609	400 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	RNF40	O75150	1001 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	SASH3	O75995	380 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	RTN3	O95197	1032 aa	Predicted RBP	4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	GOLGA6D	P0CG33	693 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	GSPT1	P15170	499 aa	Known RBP	4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	LMOD1	P29536	600 aa	Predicted RBP	4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	RFC4	P35249	363 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	GCLC	P48506	637 aa	Predicted RBP	4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	NAP1L1	P55209	391 aa	Known RBP	4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	NLRP5	P59047	1200 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	MAP3K9	P80192	1104 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	ROR2	Q01974	943 aa	Known RBP	4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	CKAP4	Q07065	602 aa	Known RBP	4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	PSMD2	Q13200	908 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	IQCB1	Q15051	598 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	ANKRD1	Q15327	319 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	ST3GAL2	Q16842	350 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	WHAMMP3	Q1A5X7	153 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	CCDC40	Q4G0X9	1142 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	AMOT	Q4VCS5	1084 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	SH2D4B	Q5SQS7	431 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	VPS53	Q5VIR6	699 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	ISM2	Q6H9L7	571 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	WDR93	Q6P2C0	686 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	KCNV1	Q6PIU1	500 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	POTEE	Q6S8J3	1075 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	NFXL1	Q6ZNB6	911 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	CCDC73	Q6ZRK6	1079 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	ARMCX6	Q7L4S7	300 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	SPATA21	Q7Z572	469 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	PLEKHM2	Q8IWE5	1019 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	CCDC83	Q8IWF9	413 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	CCAR1	Q8IX12	1150 aa	Known RBP	4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	REM2	Q8IYK8	340 aa	Predicted RBP	4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	TEX9	Q8N6V9	391 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	CCDC148	Q8NFR7	591 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	TRIM58	Q8NG06	486 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	OR8K1	Q8NGG5	319 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	SMARCC2	Q8TAQ2	1214 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	C17orf50	Q8WW18	174 aa		4.53	□□□□□ -1.68
CHD2-225	ENST00000636861	PIGB	Q92521	554 aa		4.53	□□□□□ -1.68

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