RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 CEP85Q6P2H3 762 aa9.81□□□□□ -0.84
CHRNA7-219ENST00000636709 REXO1Q8N1G1 1221 aaKnown RBP9.81□□□□□ -0.84
CHRNA7-219ENST00000636709 ANKRD44Q8N8A2 993 aa9.81□□□□□ -0.84
CHRNA7-219ENST00000636709 DACT3Q96B18 629 aaPredicted RBP9.81□□□□□ -0.84
CHRNA7-219ENST00000636709 FAM227BQ96M60 508 aa9.81□□□□□ -0.84
CHRNA7-219ENST00000636709 TNNQ9UQP3 1299 aa9.81□□□□□ -0.84
CHRNA7-219ENST00000636709 SYNRGQ9UMZ2 1314 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 PSMD2Q13200 908 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 MRPL11Q9Y3B7 192 aaKnown RBP9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 CCDC121Q6ZUS5 278 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 C2orf69Q8N8R5 385 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 BRAPQ7Z569 592 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 CTAGE3PQ8IX95 158 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 GDAP1Q8TB36 358 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 RBM46Q8TBY0 533 aaKnown RBP9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 SAMD15Q9P1V8 674 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 IL1RL1Q01638 556 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 GCKRQ14397 625 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 FBXO11Q86XK2 927 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 CEP57Q86XR8 500 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 MGARPQ8TDB4 240 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 GPKOWQ92917 476 aaPredicted RBP eCLIP9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 STMN2Q93045 179 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 CCDC127Q96BQ5 260 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 GLT8D2Q9H1C3 349 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 CCDC68Q9H2F9 335 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 ZNF277Q9NRM2 450 aaPredicted RBP9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 KIF11P52732 1056 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 SUPT20HL1Q3ZLR7 823 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 FYB2Q5VWT5 728 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 KLHL7Q8IXQ5 586 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 PI4K2BQ8TCG2 481 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 VPS37BQ9H9H4 285 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 ARFGAP3Q9NP61 516 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 VPS18Q9P253 973 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 ATP2B4P23634 1241 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 YWHAEP62258 255 aaKnown RBP9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 TYRO3Q06418 890 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 NKX1-1Q15270 411 aaPredicted RBP9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 PIDD1Q9HB75 910 aa9.8□□□□□ -0.84
CHRNA7-219ENST00000636709 ELP1O95163 1332 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 IFNB1P01574 187 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 CCDC105Q8IYK2 499 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 INO80B-WBP1J3KQ70 363 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 MNAT1P51948 309 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 MCF2L2Q86YR7 1114 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 SUCLG2Q96I99 432 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 RILPQ96NA2 401 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 NCAPGQ9BPX3 1015 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 INO80BQ9C086 356 aaPredicted RBP9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 RABEP2Q9H5N1 569 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 HESX1Q9UBX0 185 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 ANGEL1Q9UNK9 670 aaKnown RBP9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 AKR1B15C9JRZ8 316 aaPredicted RBP9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 RBBP5Q15291 538 aaKnown RBP9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 N4BP2L2Q92802 583 aaPredicted RBP9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 USP17L12C9JPN9 530 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 USP17L21D6R901 530 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 PDE6AP16499 860 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 ZNF18P17022 549 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 IREB2P48200 963 aaKnown RBP9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 HS1BP3Q53T59 392 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 ACBD5Q5T8D3 534 aaPredicted RBP9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 KRT25Q7Z3Z0 450 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 SLC7A5P2Q9GIP4 190 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 SNX25Q9H3E2 840 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 DDX25Q9UHL0 483 aaKnown RBP9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 SNAP25P60880 206 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 CYP4A11Q02928 519 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 PPARAQ07869 468 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 VWA3BQ502W6 1294 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 APPBP2Q92624 585 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 INPP5FQ9Y2H2 1132 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 ASXL1Q8IXJ9 1541 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 TTBK2Q6IQ55 1244 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 PLA2G4DQ86XP0 818 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 C7orf31Q8N865 590 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 IGSF22Q8N9C0 903 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 TEKT3Q9BXF9 490 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 ZNF518AQ6AHZ1 1483 aa9.79□□□□□ -0.84
CHRNA7-219ENST00000636709 ARHGEF10O15013 1369 aa9.78□□□□□ -0.84
CHRNA7-219ENST00000636709 SLC27A2O14975 620 aa9.78□□□□□ -0.84
CHRNA7-219ENST00000636709 VAV2P52735 878 aa9.78□□□□□ -0.84
CHRNA7-219ENST00000636709 PALM2Q8IXS6 379 aa9.78□□□□□ -0.84
CHRNA7-219ENST00000636709 LSM14BQ9BX40 385 aaKnown RBP9.78□□□□□ -0.84
CHRNA7-219ENST00000636709 NUF2Q9BZD4 464 aa9.78□□□□□ -0.84
CHRNA7-219ENST00000636709 VPS41P49754 854 aa9.78□□□□□ -0.84
CHRNA7-219ENST00000636709 LACTBP83111 547 aaPredicted RBP9.78□□□□□ -0.84
CHRNA7-219ENST00000636709 PAK1Q13153 545 aa9.78□□□□□ -0.84
CHRNA7-219ENST00000636709 ADAT2Q7Z6V5 191 aaKnown RBP9.78□□□□□ -0.84
CHRNA7-219ENST00000636709 ITSN2Q9NZM3 1697 aa9.78□□□□□ -0.84
CHRNA7-219ENST00000636709 RPS6KB1P23443 525 aa9.78□□□□□ -0.84
CHRNA7-219ENST00000636709 CERS3Q8IU89 383 aa9.78□□□□□ -0.84
CHRNA7-219ENST00000636709 RETREG2Q8NC44 543 aa9.78□□□□□ -0.84
CHRNA7-219ENST00000636709 MCUQ8NE86 351 aa9.78□□□□□ -0.84
CHRNA7-219ENST00000636709 TMEM87BQ96K49 555 aa9.78□□□□□ -0.84
CHRNA7-219ENST00000636709 GPR101Q96P66 508 aaPredicted RBP9.78□□□□□ -0.84
CHRNA7-219ENST00000636709 HINFPQ9BQA5 517 aa9.78□□□□□ -0.84
CHRNA7-219ENST00000636709 NRBP2Q9NSY0 501 aa9.78□□□□□ -0.84
CHRNA7-219ENST00000636709 CPSF3Q9UKF6 684 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms