RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 KDM5CP41229 1560 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 NOSTRINQ8IVI9 506 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 LRRC8CQ8TDW0 803 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 SSH3Q8TE77 659 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 GSDMAQ96QA5 445 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 PLXNC1O60486 1568 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 HLA-DOAP06340 250 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 PTH1RQ03431 593 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 DPCR1Q3MIW9 517 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 CFAP61Q8NHU2 1237 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 ENOX1Q8TC92 643 aaKnown RBP9.81□□□□□ -0.84
VCL-206ENST00000623461 CHAMP1Q96JM3 812 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 RILPQ96NA2 401 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 ANGPTL2Q9UKU9 493 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 NPATQ14207 1427 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 MAGEB6Q8N7X4 407 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 GEMIN8Q9NWZ8 242 aaKnown RBP9.81□□□□□ -0.84
VCL-206ENST00000623461 ARHGEF5Q12774 1597 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 ADCY10Q96PN6 1610 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 CTIFO43310 598 aaKnown RBP9.81□□□□□ -0.84
VCL-206ENST00000623461 ZWINTO95229 277 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 BCRP11274 1271 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 SESN3P58005 492 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 SLC39A14Q15043 492 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 CWF19L2Q2TBE0 894 aaKnown RBP9.81□□□□□ -0.84
VCL-206ENST00000623461 JARID2Q92833 1246 aaPredicted RBP9.81□□□□□ -0.84
VCL-206ENST00000623461 EPB41L5Q9HCM4 733 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 HEXIM1O94992 359 aaKnown RBP9.81□□□□□ -0.84
VCL-206ENST00000623461 DTNBP1Q96EV8 351 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 KRT12Q99456 494 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 FAM207AQ9NSI2 230 aaPredicted RBP9.81□□□□□ -0.84
VCL-206ENST00000623461 AGTPBP1Q9UPW5 1226 aa9.81□□□□□ -0.84
VCL-206ENST00000623461 ZMYM6O95789 1325 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 STMN1P16949 149 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 ARHGAP18Q8N392 663 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 ATP5HO75947 161 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 TBC1D8O95759 1140 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 PARP9Q8IXQ6 854 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 RUBCNQ92622 972 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 ZMAT2Q96NC0 199 aaKnown RBP9.8□□□□□ -0.84
VCL-206ENST00000623461 ANKIB1Q9P2G1 1089 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 ADGRL2O95490 1459 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 CTNND1O60716 968 aaKnown RBP9.8□□□□□ -0.84
VCL-206ENST00000623461 EEF1GP26641 437 aaKnown RBP9.8□□□□□ -0.84
VCL-206ENST00000623461 IDI1Q13907 227 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 ARHGAP42A6NI28 874 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 HAUS3Q68CZ6 603 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 ARHGEF18Q6ZSZ5 1173 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 CLIC4Q9Y696 253 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.8□□□□□ -0.84
VCL-206ENST00000623461 IL13P35225 146 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 KCNJ6P48051 423 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 LETM2Q2VYF4 491 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 KRT25Q7Z3Z0 450 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 CABP7Q86V35 215 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 PBKQ96KB5 322 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 SLC24A3Q9HC58 644 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 BZW2Q9Y6E2 419 aaKnown RBP9.8□□□□□ -0.84
VCL-206ENST00000623461 CFAP73A6NFT4 308 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 SF3A3Q12874 501 aaKnown RBP eCLIP9.8□□□□□ -0.84
VCL-206ENST00000623461 BIRC2Q13490 618 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 PPP1R21Q6ZMI0 780 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 ST13P4Q8IZP2 240 aaPredicted RBP9.8□□□□□ -0.84
VCL-206ENST00000623461 HAUS1Q96CS2 278 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 LSM14BQ9BX40 385 aaKnown RBP9.8□□□□□ -0.84
VCL-206ENST00000623461 PRDM11Q9NQV5 511 aa9.8□□□□□ -0.84
VCL-206ENST00000623461 CUL1Q13616 776 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 BLZF1Q9H2G9 400 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 ADCY9O60503 1353 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 MAP4K1Q92918 833 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 MAGEF1Q9HAY2 307 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 SYNMO15061 1565 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 MAN1A1P33908 653 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 GYS2P54840 703 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 C2orf54Q08AI8 447 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 BIRC3Q13489 604 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 HVCN1Q96D96 273 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 VPS37BQ9H9H4 285 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 PHF8Q9UPP1 1060 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 PASKQ96RG2 1323 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 BUB1O43683 1085 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 ARHGEF25Q86VW2 580 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 ATP2A3Q93084 1043 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 DPH5Q9H2P9 285 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 SSX2IPQ9Y2D8 614 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 PCDHA5Q9Y5H7 936 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 V9GY48 417 aaPredicted RBP9.79□□□□□ -0.84
VCL-206ENST00000623461 RNF8O76064 485 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 GPTP24298 496 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 TNNI2P48788 182 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 KLC4Q9NSK0 619 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 ENC1O14682 589 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 GPAA1O43292 621 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 THAP12O43422 761 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 FBLN1P23142 703 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 PHKBQ93100 1093 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 GLT8D2Q9H1C3 349 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 CROCC2H7BZ55 1655 aa9.79□□□□□ -0.84
VCL-206ENST00000623461 PABPN1LA6NDY0 278 aaKnown RBP9.78□□□□□ -0.84
VCL-206ENST00000623461 FAM133BQ5BKY9 247 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms