RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ZMYND15Q9H091 742 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 NT5C3AQ9H0P0 336 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 EXOC7Q9UPT5 735 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 NFE2L3Q9Y4A8 694 aa10.32□□□□□ -0.76
GGA3-223ENST00000621870 POTEB2H3BUK9 544 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 STX10O60499 249 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 CYP2D6P10635 497 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 ITPK1Q13572 414 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 OTUD6AQ7L8S5 288 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 DEPTORQ8TB45 409 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 SH3RF3Q8TEJ3 882 aaPredicted RBP10.31□□□□□ -0.76
GGA3-223ENST00000621870 DYDC1Q8WWB3 177 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 EEF2KMTQ96G04 330 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 PGBD1Q96JS3 809 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 WRNIP1Q96S55 665 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 ADCY9O60503 1353 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 GADD45BO75293 160 aaPredicted RBP10.31□□□□□ -0.76
GGA3-223ENST00000621870 USP14P54578 494 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 SCRN1Q12765 414 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 PTGDRQ13258 359 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 ASPRV1Q53RT3 343 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 SPOUT1Q5T280 376 aaKnown RBP10.31□□□□□ -0.76
GGA3-223ENST00000621870 PRR5LQ6MZQ0 368 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 BCCIPQ9P287 314 aaKnown RBP eCLIP10.31□□□□□ -0.76
GGA3-223ENST00000621870 GUCA1BQ9UMX6 200 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 TACC1O75410 805 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 OR52Z1P0C646 297 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 STAT2P52630 851 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 ZRSR2Q15696 482 aaKnown RBP10.31□□□□□ -0.76
GGA3-223ENST00000621870 GPBP1Q86WP2 473 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 TRMT44Q8IYL2 757 aaKnown RBP10.31□□□□□ -0.76
GGA3-223ENST00000621870 EHBP1Q8NDI1 1231 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 PIGSQ96S52 555 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 LZTFL1Q9NQ48 299 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 SERTAD1Q9UHV2 236 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 PTCH1Q13635 1447 aa10.31□□□□□ -0.76
GGA3-223ENST00000621870 FOSP01100 380 aaPredicted RBP10.3□□□□□ -0.76
GGA3-223ENST00000621870 PPP1R2P41236 205 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 SMC1AQ14683 1233 aaKnown RBP10.3□□□□□ -0.76
GGA3-223ENST00000621870 KARSQ15046 597 aaKnown RBP10.3□□□□□ -0.76
GGA3-223ENST00000621870 POSTNQ15063 836 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 Q3C1V9 767 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 MTERF4Q7Z6M4 381 aaKnown RBP10.3□□□□□ -0.76
GGA3-223ENST00000621870 MSANTD4Q8NCY6 345 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 LARSQ9P2J5 1176 aaKnown RBP10.3□□□□□ -0.76
GGA3-223ENST00000621870 ZHX1Q9UKY1 873 aaPredicted RBP10.3□□□□□ -0.76
GGA3-223ENST00000621870 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.3□□□□□ -0.766e-6■□□□□ 10.8
GGA3-223ENST00000621870 ZHX2Q9Y6X8 837 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 SPATA31A5Q5VU36 1347 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 SPATA31A7Q8IWB4 1347 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 KDM4FA0A1W2PPD8 638 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 FAM170AA1A519 330 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 KRT86O43790 486 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 EZRP15311 586 aaKnown RBP10.3□□□□□ -0.76
GGA3-223ENST00000621870 TNNI1P19237 187 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 SLC8A3P57103 927 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 PAK1Q13153 545 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 FAM102BQ5T8I3 360 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 LINC00116Q8NCU8 138 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 DDX25Q9UHL0 483 aaKnown RBP10.3□□□□□ -0.76
GGA3-223ENST00000621870 GPSM2P81274 684 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 SPP2Q13103 211 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 MAP9Q49MG5 647 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 CHAMP1Q96JM3 812 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 MAP7D2Q96T17 732 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 ATP6V0A2Q9Y487 856 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 LRRIQ4A6NIV6 560 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 CCDC175P0C221 793 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 MTX1Q13505 466 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 ARHGEF6Q15052 776 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 EZH2Q15910 746 aaKnown RBP10.3□□□□□ -0.76
GGA3-223ENST00000621870 EP400NLQ6ZTU2 488 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 SEPT14Q6ZU15 432 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 KRT26Q7Z3Y9 468 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 CDAN1Q8IWY9 1227 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 MLKLQ8NB16 471 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 PNMA2Q9UL42 364 aa10.3□□□□□ -0.76
GGA3-223ENST00000621870 CDHR2Q9BYE9 1310 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 GOLGA6L10A0A0M3HER8 536 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 BRD1O95696 1058 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 OSBPP22059 807 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 KRT9P35527 623 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 KRT83P78385 493 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 PKP1Q13835 747 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 LEKR1Q6ZMV7 388 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 CCDC50Q8IVM0 306 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 C2orf69Q8N8R5 385 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 PI4K2BQ8TCG2 481 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 FAM84BQ96KN1 310 aaPredicted RBP10.29□□□□□ -0.76
GGA3-223ENST00000621870 CLIC6Q96NY7 704 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 RNF26Q9BY78 433 aaPredicted RBP10.29□□□□□ -0.76
GGA3-223ENST00000621870 CPVLQ9H3G5 476 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 MTMR6Q9Y217 621 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 ZBTB12Q9Y330 459 aaPredicted RBP10.29□□□□□ -0.76
GGA3-223ENST00000621870 CAMSAP1Q5T5Y3 1602 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 CYP2J2P51589 502 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 SNAP25P60880 206 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 FAM178BQ8IXR5 827 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 IGSF22Q8N9C0 903 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 PPP1R9BQ96SB3 815 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms