RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 HAUS3Q68CZ6 603 aa15.89■□□□□ 0.13
PTPN9-206ENST00000618819 HIPK4Q8NE63 616 aa15.89■□□□□ 0.13
PTPN9-206ENST00000618819 V9GY48 417 aaPredicted RBP15.89■□□□□ 0.13
PTPN9-206ENST00000618819 A0A087WUV0 522 aaPredicted RBP15.89■□□□□ 0.13
PTPN9-206ENST00000618819 CCDC159P0C7I6 412 aa15.89■□□□□ 0.13
PTPN9-206ENST00000618819 ST5P78524 1137 aa15.89■□□□□ 0.13
PTPN9-206ENST00000618819 RBM26Q5T8P6 1007 aaKnown RBP15.89■□□□□ 0.13
PTPN9-206ENST00000618819 ANO3Q9BYT9 981 aa15.89■□□□□ 0.13
PTPN9-206ENST00000618819 DEXIO95424 95 aa15.89■□□□□ 0.13
PTPN9-206ENST00000618819 ATP6V1E1P36543 226 aa15.89■□□□□ 0.13
PTPN9-206ENST00000618819 GRAMD1BQ3KR37 738 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 NBPF14Q5TI25 921 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 PLEKHM2Q8IWE5 1019 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 NRBF2Q96F24 287 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 MAGED2Q9UNF1 606 aaPredicted RBP15.88■□□□□ 0.13
PTPN9-206ENST00000618819 HMGB1P1B2RPK0 211 aaPredicted RBP15.88■□□□□ 0.13
PTPN9-206ENST00000618819 ENC1O14682 589 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 MAFGO15525 162 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 RFC4P35249 363 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 HIBCHQ6NVY1 386 aaPredicted RBP15.88■□□□□ 0.13
PTPN9-206ENST00000618819 RNF217Q8TC41 542 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 IRAK4Q9NWZ3 460 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 ARHGEF9O43307 516 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 PRPF6O94906 941 aaKnown RBP15.88■□□□□ 0.13
PTPN9-206ENST00000618819 ADAMTS2O95450 1211 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 IL15P40933 162 aaPredicted RBP15.88■□□□□ 0.13
PTPN9-206ENST00000618819 TMED2Q15363 201 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 KCNJ18B7U540 433 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 SERPINI2O75830 405 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 LMNB2Q03252 620 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 KCNJ12Q14500 433 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 TRIM50Q86XT4 487 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 MYLK4Q86YV6 388 aaPredicted RBP15.88■□□□□ 0.13
PTPN9-206ENST00000618819 OGFOD1Q8N543 542 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 CCDC124Q96CT7 223 aaKnown RBP15.88■□□□□ 0.13
PTPN9-206ENST00000618819 MYL10Q9BUA6 226 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 COPS6Q7L5N1 327 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 PHKBQ93100 1093 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 TYW1Q9NV66 732 aaKnown RBP15.88■□□□□ 0.13
PTPN9-206ENST00000618819 PCDHB13Q9Y5F0 798 aa15.88■□□□□ 0.13
PTPN9-206ENST00000618819 TTBK2Q6IQ55 1244 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 ANGPTL2Q9UKU9 493 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 TTC41PQ6P2S7 1318 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 GTPBP10A4D1E9 387 aaKnown RBP15.87■□□□□ 0.13
PTPN9-206ENST00000618819 NVLO15381 856 aaKnown RBP15.87■□□□□ 0.13
PTPN9-206ENST00000618819 MSH2P43246 934 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 RINLQ6ZS11 566 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 TMEM63CQ9P1W3 806 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 KRT14P02533 472 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 LRRC8AQ8IWT6 810 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 CARD10Q9BWT7 1032 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 WDR91A4D1P6 747 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 SLC27A2O14975 620 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 TRPC5Q9UL62 973 aaPredicted RBP15.87■□□□□ 0.13
PTPN9-206ENST00000618819 NACADO15069 1562 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 MYCLP12524 364 aaPredicted RBP15.87■□□□□ 0.13
PTPN9-206ENST00000618819 STX1BP61266 288 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 MCTP2Q6DN12 878 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 LMBRD1Q9NUN5 540 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 B4DLN1 442 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 STAM2O75886 525 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 MBD4O95243 580 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 INHBAP08476 426 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 SNRPA1P09661 255 aaKnown RBP15.87■□□□□ 0.13
PTPN9-206ENST00000618819 TNNI1P19237 187 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 GARSP41250 739 aaKnown RBP15.87■□□□□ 0.13
PTPN9-206ENST00000618819 MRPL12P52815 198 aaKnown RBP15.87■□□□□ 0.13
PTPN9-206ENST00000618819 DIS3L2Q8IYB7 885 aaKnown RBP15.87■□□□□ 0.13
PTPN9-206ENST00000618819 MRPL50Q8N5N7 158 aaKnown RBP15.87■□□□□ 0.13
PTPN9-206ENST00000618819 SAAL1Q96ER3 474 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 TBK1Q9UHD2 729 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 LZTS1Q9Y250 596 aa15.87■□□□□ 0.13
PTPN9-206ENST00000618819 TCP11X2Q5H9J9 407 aa15.86■□□□□ 0.13
PTPN9-206ENST00000618819 ZNF804AQ7Z570 1209 aa15.86■□□□□ 0.13
PTPN9-206ENST00000618819 FAM186BQ8IYM0 893 aa15.86■□□□□ 0.13
PTPN9-206ENST00000618819 KIAA2013Q8IYS2 634 aa15.86■□□□□ 0.13
PTPN9-206ENST00000618819 SERTAD1Q9UHV2 236 aa15.86■□□□□ 0.13
PTPN9-206ENST00000618819 PHACTR3Q96KR7 559 aa15.86■□□□□ 0.13
PTPN9-206ENST00000618819 SLCO1A2P46721 670 aa15.86■□□□□ 0.13
PTPN9-206ENST00000618819 THEMISQ8N1K5 641 aaPredicted RBP15.86■□□□□ 0.13
PTPN9-206ENST00000618819 GFAPP14136 432 aa15.86■□□□□ 0.13
PTPN9-206ENST00000618819 KMT5BQ4FZB7 885 aa15.86■□□□□ 0.13
PTPN9-206ENST00000618819 KCNJ14Q9UNX9 436 aa15.86■□□□□ 0.13
PTPN9-206ENST00000618819 MCF2P10911 925 aa15.86■□□□□ 0.13
PTPN9-206ENST00000618819 NCF2P19878 526 aaPredicted RBP15.86■□□□□ 0.13
PTPN9-206ENST00000618819 CYP2J2P51589 502 aa15.86■□□□□ 0.13
PTPN9-206ENST00000618819 BLVRAP53004 296 aa15.86■□□□□ 0.13
PTPN9-206ENST00000618819 GJC2Q5T442 439 aaPredicted RBP15.86■□□□□ 0.13
PTPN9-206ENST00000618819 TBC1D1Q86TI0 1168 aaPredicted RBP15.86■□□□□ 0.13
PTPN9-206ENST00000618819 C2orf54Q08AI8 447 aa15.86■□□□□ 0.13
PTPN9-206ENST00000618819 LRWD1Q9UFC0 647 aa15.86■□□□□ 0.13
PTPN9-206ENST00000618819 PACSIN2Q9UNF0 486 aaPredicted RBP15.86■□□□□ 0.13
PTPN9-206ENST00000618819 hCG_1642624A0A1W2PR95 340 aa15.85■□□□□ 0.13
PTPN9-206ENST00000618819 H0Y3Z8 333 aa15.85■□□□□ 0.13
PTPN9-206ENST00000618819 CTNND1O60716 968 aaKnown RBP15.85■□□□□ 0.13
PTPN9-206ENST00000618819 HNRNPCP07910 306 aaKnown RBP eCLIP15.85■□□□□ 0.138e-8■□□□□ 9.6
PTPN9-206ENST00000618819 PSMC1P62191 440 aaKnown RBP15.85■□□□□ 0.13
PTPN9-206ENST00000618819 PDE1BQ01064 536 aa15.85■□□□□ 0.13
PTPN9-206ENST00000618819 FLOT2Q14254 428 aa15.85■□□□□ 0.13
PTPN9-206ENST00000618819 NBPF10Q6P3W6 841 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms