RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 RNF41Q9H4P4 317 aaPredicted RBP29.46■■■□□ 2.31
PMS1-220ENST00000618056 IL17RBQ9NRM6 502 aa29.46■■■□□ 2.31
PMS1-220ENST00000618056 GTF3C3Q9Y5Q9 886 aa29.46■■■□□ 2.31
PMS1-220ENST00000618056 NEFLP07196 543 aa29.45■■■□□ 2.31
PMS1-220ENST00000618056 MFSD6Q6ZSS7 791 aa29.45■■■□□ 2.31
PMS1-220ENST00000618056 TBC1D10CQ8IV04 446 aa29.45■■■□□ 2.31
PMS1-220ENST00000618056 SOCS4Q8WXH5 440 aa29.45■■■□□ 2.31
PMS1-220ENST00000618056 ATG4CQ96DT6 458 aa29.45■■■□□ 2.31
PMS1-220ENST00000618056 PLEKHH3Q7Z736 793 aa29.44■■■□□ 2.3
PMS1-220ENST00000618056 LRRC47Q8N1G4 583 aaKnown RBP29.44■■■□□ 2.3
PMS1-220ENST00000618056 CCDC136Q96JN2 1154 aa29.44■■■□□ 2.3
PMS1-220ENST00000618056 NUDT12Q9BQG2 462 aa29.44■■■□□ 2.3
PMS1-220ENST00000618056 TOMM22Q9NS69 142 aa29.44■■■□□ 2.3
PMS1-220ENST00000618056 FBXO28Q9NVF7 368 aa29.44■■■□□ 2.3
PMS1-220ENST00000618056 CTNNA3Q9UI47 895 aa29.44■■■□□ 2.3
PMS1-220ENST00000618056 PPP1R9AQ9ULJ8 1098 aa29.44■■■□□ 2.3
PMS1-220ENST00000618056 TNRC18O15417 2968 aaPredicted RBP29.44■■■□□ 2.3
PMS1-220ENST00000618056 NT5C2P49902 561 aa29.43■■■□□ 2.3
PMS1-220ENST00000618056 TMEM106CQ9BVX2 250 aa29.43■■■□□ 2.3
PMS1-220ENST00000618056 TCP11L1Q9NUJ3 509 aa29.43■■■□□ 2.3
PMS1-220ENST00000618056 STX8Q9UNK0 236 aa29.43■■■□□ 2.3
PMS1-220ENST00000618056 NMT2O60551 498 aa29.42■■■□□ 2.3
PMS1-220ENST00000618056 RRP12Q5JTH9 1297 aaKnown RBP29.42■■■□□ 2.3
PMS1-220ENST00000618056 NUP88Q99567 741 aaPredicted RBP29.42■■■□□ 2.3
PMS1-220ENST00000618056 SPATC1LQ9H0A9 340 aa29.42■■■□□ 2.3
PMS1-220ENST00000618056 PDE4DIPQ5VU43 2346 aa29.42■■■□□ 2.3
PMS1-220ENST00000618056 ZNFX1Q9P2E3 1918 aaKnown RBP29.42■■■□□ 2.3
PMS1-220ENST00000618056 ELNP15502 786 aa29.42■■■□□ 2.3
PMS1-220ENST00000618056 UBXN2AP68543 259 aa29.42■■■□□ 2.3
PMS1-220ENST00000618056 MORN1Q5T089 497 aa29.42■■■□□ 2.3
PMS1-220ENST00000618056 SHCBP1Q8NEM2 672 aa29.42■■■□□ 2.3
PMS1-220ENST00000618056 USP6NLQ92738 828 aa29.42■■■□□ 2.3
PMS1-220ENST00000618056 MOV10L1Q9BXT6 1211 aaKnown RBP29.42■■■□□ 2.3
PMS1-220ENST00000618056 ZNF236Q9UL36 1845 aa29.41■■■□□ 2.3
PMS1-220ENST00000618056 POTEFA5A3E0 1075 aa29.41■■■□□ 2.3
PMS1-220ENST00000618056 SGSM2O43147 1006 aa29.41■■■□□ 2.3
PMS1-220ENST00000618056 XRCC5P13010 732 aaKnown RBP29.41■■■□□ 2.3
PMS1-220ENST00000618056 IMMTQ16891 758 aaKnown RBP29.41■■■□□ 2.3
PMS1-220ENST00000618056 SLF1Q9BQI6 1058 aa29.41■■■□□ 2.3
PMS1-220ENST00000618056 BIN2Q9UBW5 565 aaPredicted RBP29.41■■■□□ 2.3
PMS1-220ENST00000618056 VWA5AO00534 786 aa29.4■■■□□ 2.3
PMS1-220ENST00000618056 MTFR1Q15390 333 aa29.4■■■□□ 2.3
PMS1-220ENST00000618056 SLFN13Q68D06 897 aa29.4■■■□□ 2.3
PMS1-220ENST00000618056 GMCL1Q96IK5 515 aa29.4■■■□□ 2.3
PMS1-220ENST00000618056 CWC22Q9HCG8 908 aaKnown RBP29.4■■■□□ 2.3
PMS1-220ENST00000618056 MLLT1Q03111 559 aaPredicted RBP29.39■■■□□ 2.3
PMS1-220ENST00000618056 BMP2KLQ5H9B9 411 aa29.39■■■□□ 2.3
PMS1-220ENST00000618056 SAMD1Q6SPF0 538 aaPredicted RBP29.39■■■□□ 2.3
PMS1-220ENST00000618056 PRPF38AQ8NAV1 312 aaKnown RBP29.39■■■□□ 2.3
PMS1-220ENST00000618056 NEDD4P46934 1319 aa29.39■■■□□ 2.29
PMS1-220ENST00000618056 INHAP05111 366 aa29.38■■■□□ 2.29
PMS1-220ENST00000618056 PTPREP23469 700 aa29.38■■■□□ 2.29
PMS1-220ENST00000618056 TMEM132BQ14DG7 1078 aa29.38■■■□□ 2.29
PMS1-220ENST00000618056 SKAP1Q86WV1 359 aa29.38■■■□□ 2.29
PMS1-220ENST00000618056 ESR2Q92731 530 aa29.38■■■□□ 2.29
PMS1-220ENST00000618056 FEM1BQ9UK73 627 aa29.38■■■□□ 2.29
PMS1-220ENST00000618056 IVNS1ABPQ9Y6Y0 642 aa29.38■■■□□ 2.29
PMS1-220ENST00000618056 SLC15A5A6NIM6 579 aa29.37■■■□□ 2.29
PMS1-220ENST00000618056 MYCP01106 439 aaPredicted RBP29.37■■■□□ 2.29
PMS1-220ENST00000618056 BMP3P12645 472 aa29.37■■■□□ 2.29
PMS1-220ENST00000618056 RGS2P41220 211 aa29.37■■■□□ 2.29
PMS1-220ENST00000618056 WDR78Q5VTH9 848 aa29.37■■■□□ 2.29
PMS1-220ENST00000618056 REPS2Q8NFH8 660 aa29.37■■■□□ 2.29
PMS1-220ENST00000618056 STRNO43815 780 aa29.36■■■□□ 2.29
PMS1-220ENST00000618056 HMGCRP04035 888 aa29.36■■■□□ 2.29
PMS1-220ENST00000618056 ERCC3P19447 782 aa29.36■■■□□ 2.29
PMS1-220ENST00000618056 CYP2B6P20813 491 aa29.36■■■□□ 2.29
PMS1-220ENST00000618056 MAP2K5Q13163 448 aa29.36■■■□□ 2.29
PMS1-220ENST00000618056 GRB14Q14449 540 aa29.36■■■□□ 2.29
PMS1-220ENST00000618056 PLS1Q14651 629 aa29.36■■■□□ 2.29
PMS1-220ENST00000618056 TTC14Q96N46 770 aa29.36■■■□□ 2.29
PMS1-220ENST00000618056 MROH8Q9H579 483 aa29.36■■■□□ 2.29
PMS1-220ENST00000618056 ZNF214Q9UL59 606 aaPredicted RBP29.36■■■□□ 2.29
PMS1-220ENST00000618056 CCL5P13501 91 aa29.36■■■□□ 2.29
PMS1-220ENST00000618056 TRMT44Q8IYL2 757 aaKnown RBP29.36■■■□□ 2.29
PMS1-220ENST00000618056 NKX2-3Q8TAU0 364 aa29.36■■■□□ 2.29
PMS1-220ENST00000618056 APBA2Q99767 749 aa29.36■■■□□ 2.29
PMS1-220ENST00000618056 SLC25A27O95847 323 aa29.35■■■□□ 2.29
PMS1-220ENST00000618056 TOP1P11387 765 aaKnown RBP29.35■■■□□ 2.29
PMS1-220ENST00000618056 SLC1A4P43007 532 aa29.35■■■□□ 2.29
PMS1-220ENST00000618056 PTH1RQ03431 593 aa29.35■■■□□ 2.29
PMS1-220ENST00000618056 RIOX2Q8IUF8 465 aa29.35■■■□□ 2.29
PMS1-220ENST00000618056 TRIB2Q92519 343 aa29.35■■■□□ 2.29
PMS1-220ENST00000618056 PLA2G6O60733 806 aa29.34■■■□□ 2.29
PMS1-220ENST00000618056 HOXC6P09630 235 aa29.34■■■□□ 2.29
PMS1-220ENST00000618056 MCCP23508 829 aa29.34■■■□□ 2.29
PMS1-220ENST00000618056 RCSD1Q6JBY9 416 aa29.34■■■□□ 2.29
PMS1-220ENST00000618056 TMEM47Q9BQJ4 181 aa29.34■■■□□ 2.29
PMS1-220ENST00000618056 RNF208Q9H0X6 261 aa29.34■■■□□ 2.29
PMS1-220ENST00000618056 COPB2P35606 906 aa29.33■■■□□ 2.29
PMS1-220ENST00000618056 STAT3P40763 770 aa29.33■■■□□ 2.29
PMS1-220ENST00000618056 STAT2P52630 851 aa29.33■■■□□ 2.29
PMS1-220ENST00000618056 UNC93B1Q9H1C4 597 aa29.33■■■□□ 2.29
PMS1-220ENST00000618056 CNNM2Q9H8M5 875 aa29.33■■■□□ 2.29
PMS1-220ENST00000618056 U3KPZ7 1027 aaPredicted RBP29.33■■■□□ 2.29
PMS1-220ENST00000618056 TMEM232C9JQI7 657 aa29.32■■■□□ 2.28
PMS1-220ENST00000618056 ATP2A1O14983 1001 aa29.32■■■□□ 2.28
PMS1-220ENST00000618056 KDM4AO75164 1064 aa29.32■■■□□ 2.28
PMS1-220ENST00000618056 GJB1P08034 283 aa29.32■■■□□ 2.28
PMS1-220ENST00000618056 EN2P19622 333 aaPredicted RBP29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms