RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 TTC26A0AVF1 554 aa17.18■□□□□ 0.34
LYSMD4-211ENST00000604213 SRGAP2O75044 1071 aa17.18■□□□□ 0.34
LYSMD4-211ENST00000604213 XBP1P17861 261 aa17.18■□□□□ 0.34
LYSMD4-211ENST00000604213 UBXN1Q04323 297 aa17.18■□□□□ 0.34
LYSMD4-211ENST00000604213 FUT2Q10981 343 aa17.18■□□□□ 0.34
LYSMD4-211ENST00000604213 AEBP2Q6ZN18 517 aaPredicted RBP17.18■□□□□ 0.34
LYSMD4-211ENST00000604213 LCORLQ8N3X6 602 aa17.18■□□□□ 0.34
LYSMD4-211ENST00000604213 OR8K1Q8NGG5 319 aa17.18■□□□□ 0.34
LYSMD4-211ENST00000604213 GTPBP6O43824 516 aaPredicted RBP17.17■□□□□ 0.34
LYSMD4-211ENST00000604213 PRDM1O75626 825 aa17.17■□□□□ 0.34
LYSMD4-211ENST00000604213 SEC23AQ15436 765 aa17.17■□□□□ 0.34
LYSMD4-211ENST00000604213 RIN2Q8WYP3 895 aaPredicted RBP17.17■□□□□ 0.34
LYSMD4-211ENST00000604213 TNFRSF25Q93038 417 aa17.17■□□□□ 0.34
LYSMD4-211ENST00000604213 DNAJC7Q99615 494 aa17.17■□□□□ 0.34
LYSMD4-211ENST00000604213 NACAP1Q9BZK3 213 aa17.17■□□□□ 0.34
LYSMD4-211ENST00000604213 TFR2Q9UP52 801 aa17.17■□□□□ 0.34
LYSMD4-211ENST00000604213 SLC4A4Q9Y6R1 1079 aa17.17■□□□□ 0.34
LYSMD4-211ENST00000604213 FGFR2P21802 821 aa17.17■□□□□ 0.34
LYSMD4-211ENST00000604213 ATP2C1P98194 919 aaPredicted RBP17.17■□□□□ 0.34
LYSMD4-211ENST00000604213 IRF2BP1Q8IU81 584 aa17.17■□□□□ 0.34
LYSMD4-211ENST00000604213 hCG_1642624A0A1W2PR95 340 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 SHOX2O60902 331 aaPredicted RBP17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 GNAT2P19087 354 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 GGCXP38435 758 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 PTGDRQ13258 359 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 RASGRF1Q13972 1273 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 NKX1-1Q15270 411 aaPredicted RBP17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 PUM3Q15397 648 aaKnown RBP17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 DNAJC21Q5F1R6 531 aaKnown RBP17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 TTC38Q5R3I4 469 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 ZNF658Q5TYW1 1059 aaPredicted RBP17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 NLRP10Q86W26 655 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 LPIN2Q92539 896 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 UBAC1Q9BSL1 405 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 PNPLA7Q6ZV29 1317 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 AGPSO00116 658 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 PRPF3O43395 683 aaKnown RBP17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 CPP00450 1065 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 GPTP24298 496 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 PPP2R5BQ15173 497 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 NPY5RQ15761 445 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 CCDC122Q5T0U0 273 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 WDR59Q6PJI9 974 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 ZNF662Q6ZS27 426 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 MB21D1Q8N884 522 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 HELBQ8NG08 1087 aaPredicted RBP17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 RPGRIP1Q96KN7 1286 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 RNF41Q9H4P4 317 aaPredicted RBP17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 JRKLQ9Y4A0 524 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 SPATA31A3Q5VYP0 1347 aa17.16■□□□□ 0.34
LYSMD4-211ENST00000604213 DISP2A7MBM2 1401 aa17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 ZMYND10O75800 440 aa17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 PARP1P09874 1014 aaKnown RBP17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 GTF2A1P52655 376 aaPredicted RBP17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 CKAP4Q07065 602 aaKnown RBP17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 HLFQ16534 295 aa17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 GIGYF2Q6Y7W6 1299 aaKnown RBP17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 CCNI2Q6ZMN8 369 aaPredicted RBP17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 PROSER2Q86WR7 435 aaPredicted RBP17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 CERS3Q8IU89 383 aa17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 EFCAB13Q8IY85 973 aa17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 SMARCC1Q92922 1105 aaPredicted RBP17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 CAPZA3Q96KX2 299 aa17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 GDAP1L1Q96MZ0 367 aa17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 LUC7L2Q9Y383 392 aaKnown RBP17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 MYH6P13533 1939 aa17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 RTL9Q8NET4 1388 aa17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 MYBL2P10244 700 aa17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 CAPN11Q9UMQ6 739 aa17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 V9GY48 417 aaPredicted RBP17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 TNKSO95271 1327 aa17.15■□□□□ 0.34
LYSMD4-211ENST00000604213 LGALS16A8MUM7 142 aa17.14■□□□□ 0.33
LYSMD4-211ENST00000604213 H7C1D1 291 aa17.14■□□□□ 0.33
LYSMD4-211ENST00000604213 IRS4O14654 1257 aaPredicted RBP17.14■□□□□ 0.33
LYSMD4-211ENST00000604213 PRCPP42785 496 aa17.14■□□□□ 0.33
LYSMD4-211ENST00000604213 IL17AQ16552 155 aa17.14■□□□□ 0.33
LYSMD4-211ENST00000604213 GSPT2Q8IYD1 628 aaKnown RBP17.14■□□□□ 0.33
LYSMD4-211ENST00000604213 ZNF507Q8TCN5 953 aa17.14■□□□□ 0.33
LYSMD4-211ENST00000604213 JAKMIP2Q96AA8 810 aa17.14■□□□□ 0.33
LYSMD4-211ENST00000604213 SELENOOQ9BVL4 669 aa17.14■□□□□ 0.33
LYSMD4-211ENST00000604213 MAPK8IP1Q9UQF2 711 aa17.14■□□□□ 0.33
LYSMD4-211ENST00000604213 GDAQ9Y2T3 454 aa17.14■□□□□ 0.33
LYSMD4-211ENST00000604213 A0A1W2PQC6 194 aa17.14■□□□□ 0.33
LYSMD4-211ENST00000604213 PDE2AO00408 941 aaPredicted RBP17.14■□□□□ 0.33
LYSMD4-211ENST00000604213 PLEKHA8P1O95397 391 aa17.14■□□□□ 0.33
LYSMD4-211ENST00000604213 RPN1P04843 607 aaKnown RBP17.14■□□□□ 0.33
LYSMD4-211ENST00000604213 PPARAQ07869 468 aa17.14■□□□□ 0.33
LYSMD4-211ENST00000604213 CRACR2AQ9BSW2 395 aa17.14■□□□□ 0.33
LYSMD4-211ENST00000604213 RMND1Q9NWS8 449 aa17.14■□□□□ 0.33
LYSMD4-211ENST00000604213 DOCK2Q92608 1830 aa17.13■□□□□ 0.33
LYSMD4-211ENST00000604213 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.13■□□□□ 0.33
LYSMD4-211ENST00000604213 PYM1Q9BRP8 204 aaKnown RBP17.13■□□□□ 0.33
LYSMD4-211ENST00000604213 GNL3LQ9NVN8 582 aaKnown RBP17.13■□□□□ 0.33
LYSMD4-211ENST00000604213 RCCD1A6NED2 376 aa17.13■□□□□ 0.33
LYSMD4-211ENST00000604213 KRT83P78385 493 aa17.13■□□□□ 0.33
LYSMD4-211ENST00000604213 MEA1Q16626 185 aa17.13■□□□□ 0.33
LYSMD4-211ENST00000604213 DNAJC10Q8IXB1 793 aa17.13■□□□□ 0.33
LYSMD4-211ENST00000604213 EHBP1Q8NDI1 1231 aa17.13■□□□□ 0.33
LYSMD4-211ENST00000604213 KAT14Q9H8E8 782 aa17.13■□□□□ 0.33
LYSMD4-211ENST00000604213 BRMS1Q9HCU9 246 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms