RNA–Protein interactions for RNA: ENST00000596962.5

PGPEP1-205, Transcript of pyroglutamyl-peptidase I, humanhuman

TSL 1 (best)

Gene PGPEP1, Length 1,237 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGPEP1-205ENST00000596962 PRRT2Q7Z6L0 340 aaPredicted RBP16.78■□□□□ 0.28
PGPEP1-205ENST00000596962 CTU1Q7Z7A3 348 aaKnown RBP16.78■□□□□ 0.28
PGPEP1-205ENST00000596962 ZNF654Q8IZM8 581 aa16.78■□□□□ 0.28
PGPEP1-205ENST00000596962 LRRC47Q8N1G4 583 aaKnown RBP16.78■□□□□ 0.28
PGPEP1-205ENST00000596962 PROCA1Q8NCQ7 364 aaPredicted RBP16.78■□□□□ 0.28
PGPEP1-205ENST00000596962 GMCL1Q96IK5 515 aa16.78■□□□□ 0.28
PGPEP1-205ENST00000596962 CCDC196A0A1B0GTZ2 297 aa16.77■□□□□ 0.28
PGPEP1-205ENST00000596962 CCDC85CA6NKD9 419 aa16.77■□□□□ 0.28
PGPEP1-205ENST00000596962 IGF2BP3O00425 579 aaKnown RBP eCLIP16.77■□□□□ 0.28
PGPEP1-205ENST00000596962 ZBTB43O43298 467 aa16.77■□□□□ 0.28
PGPEP1-205ENST00000596962 KIF5BP33176 963 aa16.77■□□□□ 0.28
PGPEP1-205ENST00000596962 APOBRQ0VD83 1088 aa16.77■□□□□ 0.28
PGPEP1-205ENST00000596962 TROAPQ12815 778 aa16.77■□□□□ 0.28
PGPEP1-205ENST00000596962 GPATCH4Q5T3I0 446 aaKnown RBP16.77■□□□□ 0.28
PGPEP1-205ENST00000596962 SENP2Q9HC62 589 aa16.77■□□□□ 0.28
PGPEP1-205ENST00000596962 SH2B1Q9NRF2 756 aaPredicted RBP16.77■□□□□ 0.28
PGPEP1-205ENST00000596962 WDR46O15213 610 aaKnown RBP16.76■□□□□ 0.27
PGPEP1-205ENST00000596962 RAD21O60216 631 aa16.76■□□□□ 0.27
PGPEP1-205ENST00000596962 TBC1D8O95759 1140 aa16.76■□□□□ 0.27
PGPEP1-205ENST00000596962 NDUFB10O96000 172 aa16.76■□□□□ 0.27
PGPEP1-205ENST00000596962 SNHG28P0DPA3 235 aa16.76■□□□□ 0.27
PGPEP1-205ENST00000596962 SLC1A4P43007 532 aa16.76■□□□□ 0.27
PGPEP1-205ENST00000596962 GNAQP50148 359 aa16.76■□□□□ 0.27
PGPEP1-205ENST00000596962 HMGCS2P54868 508 aa16.76■□□□□ 0.27
PGPEP1-205ENST00000596962 ASPRV1Q53RT3 343 aa16.76■□□□□ 0.27
PGPEP1-205ENST00000596962 CTCFLQ8NI51 663 aaPredicted RBP16.76■□□□□ 0.27
PGPEP1-205ENST00000596962 SNX21Q969T3 373 aa16.76■□□□□ 0.27
PGPEP1-205ENST00000596962 EMILIN3Q9NT22 766 aa16.76■□□□□ 0.27
PGPEP1-205ENST00000596962 BRPF3Q9ULD4 1205 aa16.76■□□□□ 0.27
PGPEP1-205ENST00000596962 NAP1L2Q9ULW6 460 aaPredicted RBP16.76■□□□□ 0.27
PGPEP1-205ENST00000596962 GOLGA8BA8MQT2 603 aa16.75■□□□□ 0.27
PGPEP1-205ENST00000596962 DHX16O60231 1041 aaKnown RBP16.75■□□□□ 0.27
PGPEP1-205ENST00000596962 PARP1P09874 1014 aaKnown RBP16.75■□□□□ 0.27
PGPEP1-205ENST00000596962 PDHBP11177 359 aa16.75■□□□□ 0.27
PGPEP1-205ENST00000596962 PDIA3P30101 505 aaKnown RBP16.75■□□□□ 0.27
PGPEP1-205ENST00000596962 PABPC4Q13310 644 aaKnown RBP eCLIP16.75■□□□□ 0.27
PGPEP1-205ENST00000596962 GRM4Q14833 912 aa16.75■□□□□ 0.27
PGPEP1-205ENST00000596962 ZYXQ15942 572 aaKnown RBP16.75■□□□□ 0.27
PGPEP1-205ENST00000596962 PKN2Q16513 984 aaKnown RBP16.75■□□□□ 0.27
PGPEP1-205ENST00000596962 OTUD7BQ6GQQ9 843 aa16.75■□□□□ 0.27
PGPEP1-205ENST00000596962 IFNL1Q8IU54 200 aa16.75■□□□□ 0.27
PGPEP1-205ENST00000596962 FANCBQ8NB91 859 aa16.75■□□□□ 0.27
PGPEP1-205ENST00000596962 NUP133Q8WUM0 1156 aa16.75■□□□□ 0.27
PGPEP1-205ENST00000596962 ZNF296Q8WUU4 475 aaPredicted RBP16.75■□□□□ 0.27
PGPEP1-205ENST00000596962 MS4A4AQ96JQ5 239 aa16.75■□□□□ 0.27
PGPEP1-205ENST00000596962 LZTS2Q9BRK4 669 aa16.75■□□□□ 0.27
PGPEP1-205ENST00000596962 R3HDMLQ9H3Y0 253 aa16.75■□□□□ 0.27
PGPEP1-205ENST00000596962 RBM28Q9NW13 759 aaKnown RBP16.75■□□□□ 0.27
PGPEP1-205ENST00000596962 GPR25O00155 361 aa16.74■□□□□ 0.27
PGPEP1-205ENST00000596962 BMP3P12645 472 aa16.74■□□□□ 0.27
PGPEP1-205ENST00000596962 METAP2P50579 478 aaKnown RBP eCLIP16.74■□□□□ 0.27
PGPEP1-205ENST00000596962 MICU3Q86XE3 530 aa16.74■□□□□ 0.27
PGPEP1-205ENST00000596962 PTPN18Q99952 460 aa16.74■□□□□ 0.27
PGPEP1-205ENST00000596962 SLKQ9H2G2 1235 aaPredicted RBP16.74■□□□□ 0.27
PGPEP1-205ENST00000596962 TPCN1Q9ULQ1 816 aa16.74■□□□□ 0.27
PGPEP1-205ENST00000596962 ZSWIM8A7E2V4 1837 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 GREB1LQ9C091 1923 aaPredicted RBP16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 TESPA1A2RU30 521 aaPredicted RBP16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 GOLGA8AA7E2F4 631 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 USP17L15C9J2P7 530 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 USP17L13C9JLJ4 530 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 USP17L11C9JVI0 530 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 USP17L18D6R9N7 530 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 USP17L22D6RA61 530 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 USP17L17D6RBQ6 530 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 USP17L19D6RCP7 530 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 USP17L20D6RJB6 530 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 PLA2G6O60733 806 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 PFKFB2O60825 505 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 VCAM1P19320 739 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 ZNF543Q08ER8 600 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 USP17L24Q0WX57 530 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 RTN1Q16799 776 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 CCDC96Q2M329 555 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 CPLX2Q6PUV4 134 aaKnown RBP16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 GADL1Q6ZQY3 521 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 FAM160B2Q86V87 743 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 HSCBQ8IWL3 235 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 SPICE1Q8N0Z3 855 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 CHURC1Q8WUH1 139 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 BRI3BPQ8WY22 251 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 FEM1BQ9UK73 627 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 AGTPBP1Q9UPW5 1226 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 MTMR7Q9Y216 660 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 SLC45A1Q9Y2W3 748 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 NID2Q14112 1375 aa16.73■□□□□ 0.27
PGPEP1-205ENST00000596962 CCL15-CCL14A0A0B4J2E2 113 aa16.72■□□□□ 0.27
PGPEP1-205ENST00000596962 PALM3A6NDB9 673 aaPredicted RBP16.72■□□□□ 0.27
PGPEP1-205ENST00000596962 FKTNO75072 461 aa16.72■□□□□ 0.27
PGPEP1-205ENST00000596962 SMARCA1P28370 1054 aa16.72■□□□□ 0.27
PGPEP1-205ENST00000596962 HOXA7P31268 230 aaPredicted RBP16.72■□□□□ 0.27
PGPEP1-205ENST00000596962 CCL15Q16663 113 aa16.72■□□□□ 0.27
PGPEP1-205ENST00000596962 NOL8Q76FK4 1167 aaKnown RBP16.72■□□□□ 0.27
PGPEP1-205ENST00000596962 MYL10Q9BUA6 226 aa16.72■□□□□ 0.27
PGPEP1-205ENST00000596962 RPAP3Q9H6T3 665 aaPredicted RBP16.72■□□□□ 0.27
PGPEP1-205ENST00000596962 ZCCHC17Q9NP64 241 aaKnown RBP16.72■□□□□ 0.27
PGPEP1-205ENST00000596962 ISY1Q9ULR0 285 aaKnown RBP16.72■□□□□ 0.27
PGPEP1-205ENST00000596962 HPS5Q9UPZ3 1129 aa16.72■□□□□ 0.27
PGPEP1-205ENST00000596962 BECN1Q14457 450 aa16.71■□□□□ 0.27
PGPEP1-205ENST00000596962 ME3Q16798 604 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms