RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 NDUFB10O96000 172 aa10.2□□□□□ -0.78
SNRPA-202ENST00000596860 SLC1A4P43007 532 aa10.2□□□□□ -0.78
SNRPA-202ENST00000596860 HTRA3P83110 453 aa10.2□□□□□ -0.78
SNRPA-202ENST00000596860 TRAF1Q13077 416 aa10.2□□□□□ -0.78
SNRPA-202ENST00000596860 FAM160B2Q86V87 743 aa10.2□□□□□ -0.78
SNRPA-202ENST00000596860 ZNF713Q8N859 430 aaPredicted RBP10.2□□□□□ -0.78
SNRPA-202ENST00000596860 WASF1Q92558 559 aa10.2□□□□□ -0.78
SNRPA-202ENST00000596860 RIOX1Q9H6W3 641 aa10.2□□□□□ -0.78
SNRPA-202ENST00000596860 MAD2L2Q9UI95 211 aa10.2□□□□□ -0.78
SNRPA-202ENST00000596860 ZHX2Q9Y6X8 837 aa10.2□□□□□ -0.78
SNRPA-202ENST00000596860 A0A0G2JLL6 359 aaPredicted RBP10.19□□□□□ -0.78
SNRPA-202ENST00000596860 PRPF3O43395 683 aaKnown RBP10.19□□□□□ -0.78
SNRPA-202ENST00000596860 DEXIO95424 95 aa10.19□□□□□ -0.78
SNRPA-202ENST00000596860 HSP90AA1P07900 732 aaKnown RBP10.19□□□□□ -0.78
SNRPA-202ENST00000596860 BMP3P12645 472 aa10.19□□□□□ -0.78
SNRPA-202ENST00000596860 PDCP20941 246 aa10.19□□□□□ -0.78
SNRPA-202ENST00000596860 ATP2B2Q01814 1243 aa10.19□□□□□ -0.78
SNRPA-202ENST00000596860 FUT2Q10981 343 aa10.19□□□□□ -0.78
SNRPA-202ENST00000596860 ST3GAL1Q11201 340 aa10.19□□□□□ -0.78
SNRPA-202ENST00000596860 SHROOM1Q2M3G4 852 aaPredicted RBP10.19□□□□□ -0.78
SNRPA-202ENST00000596860 CST9Q5W186 159 aa10.19□□□□□ -0.78
SNRPA-202ENST00000596860 FASTKD5Q7L8L6 764 aaKnown RBP10.19□□□□□ -0.78
SNRPA-202ENST00000596860 PRRT2Q7Z6L0 340 aaPredicted RBP10.19□□□□□ -0.78
SNRPA-202ENST00000596860 CCDC83Q8IWF9 413 aa10.19□□□□□ -0.78
SNRPA-202ENST00000596860 TRIM22Q8IYM9 498 aa10.19□□□□□ -0.78
SNRPA-202ENST00000596860 LRRC47Q8N1G4 583 aaKnown RBP10.19□□□□□ -0.78
SNRPA-202ENST00000596860 NSUN7Q8NE18 718 aaKnown RBP10.19□□□□□ -0.78
SNRPA-202ENST00000596860 ACER1Q8TDN7 264 aa10.19□□□□□ -0.78
SNRPA-202ENST00000596860 CHURC1Q8WUH1 139 aa10.19□□□□□ -0.78
SNRPA-202ENST00000596860 NUP133Q8WUM0 1156 aa10.19□□□□□ -0.78
SNRPA-202ENST00000596860 MTMR8Q96EF0 704 aa10.19□□□□□ -0.78
SNRPA-202ENST00000596860 SLC10A4Q96EP9 437 aa10.19□□□□□ -0.78
SNRPA-202ENST00000596860 FEZ1Q99689 392 aa10.19□□□□□ -0.78
SNRPA-202ENST00000596860 ZCCHC17Q9NP64 241 aaKnown RBP10.19□□□□□ -0.78
SNRPA-202ENST00000596860 FEM1BQ9UK73 627 aa10.19□□□□□ -0.78
SNRPA-202ENST00000596860 CIZ1Q9ULV3 898 aaPredicted RBP10.19□□□□□ -0.78
SNRPA-202ENST00000596860 SLC45A1Q9Y2W3 748 aa10.19□□□□□ -0.78
SNRPA-202ENST00000596860 RLFQ13129 1914 aa10.19□□□□□ -0.78
SNRPA-202ENST00000596860 CNTNAP5Q8WYK1 1306 aa10.18□□□□□ -0.78
SNRPA-202ENST00000596860 TMEM88BA6NKF7 163 aa10.18□□□□□ -0.78
SNRPA-202ENST00000596860 KLRF2D3W0D1 207 aa10.18□□□□□ -0.78
SNRPA-202ENST00000596860 UBE2Q2LH0YL09 131 aa10.18□□□□□ -0.78
SNRPA-202ENST00000596860 FMNL1O95466 1100 aaPredicted RBP10.18□□□□□ -0.78
SNRPA-202ENST00000596860 HSPA1AP0DMV8 641 aaKnown RBP10.18□□□□□ -0.78
SNRPA-202ENST00000596860 HSPA1BP0DMV9 641 aaKnown RBP10.18□□□□□ -0.78
SNRPA-202ENST00000596860 CDC27P30260 824 aa10.18□□□□□ -0.78
SNRPA-202ENST00000596860 HOXA7P31268 230 aaPredicted RBP10.18□□□□□ -0.78
SNRPA-202ENST00000596860 ADD1P35611 737 aaKnown RBP10.18□□□□□ -0.78
SNRPA-202ENST00000596860 ECE1P42892 770 aa10.18□□□□□ -0.78
SNRPA-202ENST00000596860 SPP2Q13103 211 aa10.18□□□□□ -0.78
SNRPA-202ENST00000596860 PABPC4Q13310 644 aaKnown RBP eCLIP10.18□□□□□ -0.789e-11■■□□□ 11.4
SNRPA-202ENST00000596860 SNAPC2Q13487 334 aa10.18□□□□□ -0.78
SNRPA-202ENST00000596860 NBPF11Q86T75 865 aa10.18□□□□□ -0.78
SNRPA-202ENST00000596860 CLEC10AQ8IUN9 316 aa10.18□□□□□ -0.78
SNRPA-202ENST00000596860 GTF3C2Q8WUA4 911 aaPredicted RBP10.18□□□□□ -0.78
SNRPA-202ENST00000596860 OPTNQ96CV9 577 aa10.18□□□□□ -0.78
SNRPA-202ENST00000596860 WNK4Q96J92 1243 aa10.18□□□□□ -0.78
SNRPA-202ENST00000596860 MAF1Q9H063 256 aa10.18□□□□□ -0.78
SNRPA-202ENST00000596860 TMOD4Q9NZQ9 345 aa10.18□□□□□ -0.78
SNRPA-202ENST00000596860 NAP1L2Q9ULW6 460 aaPredicted RBP10.18□□□□□ -0.78
SNRPA-202ENST00000596860 SMC3Q9UQE7 1217 aa10.18□□□□□ -0.78
SNRPA-202ENST00000596860 TLL2Q9Y6L7 1015 aa10.18□□□□□ -0.78
SNRPA-202ENST00000596860 BAZ2BQ9UIF8 2168 aaKnown RBP10.18□□□□□ -0.78
SNRPA-202ENST00000596860 TESPA1A2RU30 521 aaPredicted RBP10.17□□□□□ -0.78
SNRPA-202ENST00000596860 CTDNEP1O95476 244 aa10.17□□□□□ -0.78
SNRPA-202ENST00000596860 STAT2P52630 851 aa10.17□□□□□ -0.78
SNRPA-202ENST00000596860 GTF2A2P52657 109 aa10.17□□□□□ -0.78
SNRPA-202ENST00000596860 INHBEP58166 350 aa10.17□□□□□ -0.78
SNRPA-202ENST00000596860 CCT2P78371 535 aaKnown RBP10.17□□□□□ -0.78
SNRPA-202ENST00000596860 AKAP17AQ02040 695 aaKnown RBP10.17□□□□□ -0.78
SNRPA-202ENST00000596860 SSRP1Q08945 709 aaKnown RBP10.17□□□□□ -0.78
SNRPA-202ENST00000596860 STK3Q13188 491 aa10.17□□□□□ -0.78
SNRPA-202ENST00000596860 MTMR2Q13614 643 aa10.17□□□□□ -0.78
SNRPA-202ENST00000596860 PRKG1Q13976 671 aa10.17□□□□□ -0.78
SNRPA-202ENST00000596860 DLK2Q6UY11 383 aa10.17□□□□□ -0.78
SNRPA-202ENST00000596860 NOL8Q76FK4 1167 aaKnown RBP10.17□□□□□ -0.78
SNRPA-202ENST00000596860 SAPCD2Q86UD0 394 aa10.17□□□□□ -0.78
SNRPA-202ENST00000596860 REM2Q8IYK8 340 aaPredicted RBP10.17□□□□□ -0.78
SNRPA-202ENST00000596860 SRBD1Q8N5C6 995 aaKnown RBP10.17□□□□□ -0.78
SNRPA-202ENST00000596860 NECAB1Q8N987 351 aa10.17□□□□□ -0.78
SNRPA-202ENST00000596860 CCDC102AQ96A19 550 aa10.17□□□□□ -0.78
SNRPA-202ENST00000596860 LARP6Q9BRS8 491 aaKnown RBP10.17□□□□□ -0.78
SNRPA-202ENST00000596860 MYL10Q9BUA6 226 aa10.17□□□□□ -0.78
SNRPA-202ENST00000596860 ELP3Q9H9T3 547 aa10.17□□□□□ -0.78
SNRPA-202ENST00000596860 NCOA5Q9HCD5 579 aaKnown RBP10.17□□□□□ -0.78
SNRPA-202ENST00000596860 SH3GLB2Q9NR46 395 aa10.17□□□□□ -0.78
SNRPA-202ENST00000596860 EMILIN3Q9NT22 766 aa10.17□□□□□ -0.78
SNRPA-202ENST00000596860 A0A0G2JMZ2 1700 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 PTPDC1A2A3K4 754 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 USP17L15C9J2P7 530 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 USP17L13C9JLJ4 530 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 USP17L11C9JVI0 530 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 USP17L18D6R9N7 530 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 USP17L22D6RA61 530 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 USP17L17D6RBQ6 530 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 USP17L19D6RCP7 530 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 USP17L20D6RJB6 530 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 IRF6O14896 467 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 CETPP11597 493 aa10.16□□□□□ -0.78
SNRPA-202ENST00000596860 XBP1P17861 261 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms