RNA–Protein interactions for RNA: ENST00000584970.1

DDX25-209, Transcript of DEAD-box helicase 25, human

TSL 3

Gene DDX25, Length 460 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX25-209	ENST00000584970	LRRC2	Q9BYS8	371 aa		13.23	□□□□□ -0.29
DDX25-209	ENST00000584970	PNMA3	Q9UL41	463 aa		13.23	□□□□□ -0.29
DDX25-209	ENST00000584970	MYH6	P13533	1939 aa		13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	USP17L15	C9J2P7	530 aa		13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	USP17L13	C9JLJ4	530 aa		13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	USP17L11	C9JVI0	530 aa		13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	USP17L18	D6R9N7	530 aa		13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	USP17L22	D6RA61	530 aa		13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	USP17L17	D6RBQ6	530 aa		13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	USP17L19	D6RCP7	530 aa		13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	USP17L20	D6RJB6	530 aa		13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	BMP3	P12645	472 aa		13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	VEGFB	P49765	207 aa		13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	STAT2	P52630	851 aa		13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	ZNF543	Q08ER8	600 aa		13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	USP17L24	Q0WX57	530 aa		13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	ZYX	Q15942	572 aa	Known RBP	13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	GADL1	Q6ZQY3	521 aa		13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	HSCB	Q8IWL3	235 aa		13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	BRI3BP	Q8WY22	251 aa		13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	TCEANC2	Q96MN5	208 aa		13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	FEM1B	Q9UK73	627 aa		13.22	□□□□□ -0.29
DDX25-209	ENST00000584970	PCNT	O95613	3336 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	COL11A1	P12107	1806 aa	Predicted RBP	13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	KLF18	A0A0U1RQI7	1052 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	CCDC196	A0A1B0GTZ2	297 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	ZBTB43	O43298	467 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	PARP1	P09874	1014 aa	Known RBP	13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	FDX1	P10109	184 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	SMARCA1	P28370	1054 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	AK2	P54819	239 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	KIF23	Q02241	960 aa	Predicted RBP	13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	MKRN3	Q13064	507 aa	Known RBP	13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	GRM4	Q14833	912 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	KIAA1755	Q5JYT7	1200 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	GPAT2	Q6NUI2	795 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	BTNL9	Q6UXG8	535 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	LBX2	Q6XYB7	198 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	CATSPERG	Q6ZRH7	1159 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	FAM160B2	Q86V87	743 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	IFNL1	Q8IU54	200 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	CTCFL	Q8NI51	663 aa	Predicted RBP	13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	CHURC1	Q8WUH1	139 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	CHMP4C	Q96CF2	233 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	LZTS2	Q9BRK4	669 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	CFHR5	Q9BXR6	569 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	SENP2	Q9HC62	589 aa		13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	RBM28	Q9NW13	759 aa	Known RBP	13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.21	□□□□□ -0.29
DDX25-209	ENST00000584970	CEP350	Q5VT06	3117 aa		13.21	□□□□□ -0.3
DDX25-209	ENST00000584970	PALM3	A6NDB9	673 aa	Predicted RBP	13.2	□□□□□ -0.3
DDX25-209	ENST00000584970	BTBD19	C9JJ37	291 aa		13.2	□□□□□ -0.3
DDX25-209	ENST00000584970	OSBP	P22059	807 aa		13.2	□□□□□ -0.3
DDX25-209	ENST00000584970	GNAQ	P50148	359 aa		13.2	□□□□□ -0.3
DDX25-209	ENST00000584970	HTRA3	P83110	453 aa		13.2	□□□□□ -0.3
DDX25-209	ENST00000584970	APOBR	Q0VD83	1088 aa		13.2	□□□□□ -0.3
DDX25-209	ENST00000584970	FAM83B	Q5T0W9	1011 aa		13.2	□□□□□ -0.3
DDX25-209	ENST00000584970	TREML2	Q5T2D2	321 aa		13.2	□□□□□ -0.3
DDX25-209	ENST00000584970	SPICE1	Q8N0Z3	855 aa		13.2	□□□□□ -0.3
DDX25-209	ENST00000584970	PRPF38A	Q8NAV1	312 aa	Known RBP	13.2	□□□□□ -0.3
DDX25-209	ENST00000584970	FANCB	Q8NB91	859 aa		13.2	□□□□□ -0.3
DDX25-209	ENST00000584970	PARK7	Q99497	189 aa	Known RBP	13.2	□□□□□ -0.3
DDX25-209	ENST00000584970	PTPN18	Q99952	460 aa		13.2	□□□□□ -0.3
DDX25-209	ENST00000584970	TANGO6	Q9C0B7	1094 aa		13.2	□□□□□ -0.3
DDX25-209	ENST00000584970	GPHN	Q9NQX3	736 aa	Predicted RBP	13.2	□□□□□ -0.3
DDX25-209	ENST00000584970	HOXC10	Q9NYD6	342 aa		13.2	□□□□□ -0.3
DDX25-209	ENST00000584970	MAD2L2	Q9UI95	211 aa		13.2	□□□□□ -0.3
DDX25-209	ENST00000584970	BRPF3	Q9ULD4	1205 aa		13.2	□□□□□ -0.3
DDX25-209	ENST00000584970	GOLGA8B	A8MQT2	603 aa		13.19	□□□□□ -0.3
DDX25-209	ENST00000584970	PDHX	O00330	501 aa		13.19	□□□□□ -0.3
DDX25-209	ENST00000584970	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
DDX25-209	ENST00000584970	RAD21	O60216	631 aa		13.19	□□□□□ -0.3
DDX25-209	ENST00000584970	DHX16	O60231	1041 aa	Known RBP	13.19	□□□□□ -0.3
DDX25-209	ENST00000584970	PDIA3	P30101	505 aa	Known RBP	13.19	□□□□□ -0.3
DDX25-209	ENST00000584970	METAP2	P50579	478 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
DDX25-209	ENST00000584970	IRX3	P78415	501 aa	Predicted RBP	13.19	□□□□□ -0.3
DDX25-209	ENST00000584970	GRM1	Q13255	1194 aa		13.19	□□□□□ -0.3
DDX25-209	ENST00000584970	COG2	Q14746	738 aa		13.19	□□□□□ -0.3
DDX25-209	ENST00000584970	CCDC96	Q2M329	555 aa		13.19	□□□□□ -0.3
DDX25-209	ENST00000584970	MICU3	Q86XE3	530 aa		13.19	□□□□□ -0.3
DDX25-209	ENST00000584970	MB21D1	Q8N884	522 aa		13.19	□□□□□ -0.3
DDX25-209	ENST00000584970	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.19	□□□□□ -0.3
DDX25-209	ENST00000584970	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.19	□□□□□ -0.3
DDX25-209	ENST00000584970	SAGE1	Q9NXZ1	904 aa		13.19	□□□□□ -0.3
DDX25-209	ENST00000584970	LIMCH1	Q9UPQ0	1083 aa		13.19	□□□□□ -0.3
DDX25-209	ENST00000584970	TMEM232	C9JQI7	657 aa		13.18	□□□□□ -0.3
DDX25-209	ENST00000584970	AOC2	O75106	756 aa		13.18	□□□□□ -0.3
DDX25-209	ENST00000584970	FLOT1	O75955	427 aa		13.18	□□□□□ -0.3
DDX25-209	ENST00000584970	GCLC	P48506	637 aa	Predicted RBP	13.18	□□□□□ -0.3
DDX25-209	ENST00000584970	MAP2K1	Q02750	393 aa	Predicted RBP	13.18	□□□□□ -0.3
DDX25-209	ENST00000584970	DGKZ	Q13574	1117 aa		13.18	□□□□□ -0.3
DDX25-209	ENST00000584970	RTN1	Q16799	776 aa		13.18	□□□□□ -0.3
DDX25-209	ENST00000584970	FAM43A	Q8N2R8	423 aa		13.18	□□□□□ -0.3
DDX25-209	ENST00000584970	DNAJC5G	Q8N7S2	189 aa		13.18	□□□□□ -0.3
DDX25-209	ENST00000584970	NUP133	Q8WUM0	1156 aa		13.18	□□□□□ -0.3
DDX25-209	ENST00000584970	SNX21	Q969T3	373 aa		13.18	□□□□□ -0.3
DDX25-209	ENST00000584970	SLF1	Q9BQI6	1058 aa		13.18	□□□□□ -0.3
DDX25-209	ENST00000584970	SPZ1	Q9BXG8	430 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms