RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 CD8BP10966 210 aa6.91□□□□□ -1.3
NF1-220ENST00000581113 TPP2P29144 1249 aaPredicted RBP6.91□□□□□ -1.3
NF1-220ENST00000581113 SREK1Q8WXA9 508 aaKnown RBP6.91□□□□□ -1.3
NF1-220ENST00000581113 DHX38Q92620 1227 aaKnown RBP6.91□□□□□ -1.3
NF1-220ENST00000581113 SRFP11831 508 aa6.9□□□□□ -1.31
NF1-220ENST00000581113 ANGEL2Q5VTE6 544 aaKnown RBP6.9□□□□□ -1.31
NF1-220ENST00000581113 KIAA1211LQ6NV74 962 aa6.9□□□□□ -1.31
NF1-220ENST00000581113 NFXL1Q6ZNB6 911 aa6.9□□□□□ -1.31
NF1-220ENST00000581113 C7orf61Q8IZ16 206 aa6.9□□□□□ -1.31
NF1-220ENST00000581113 Q8N3U1 123 aa6.9□□□□□ -1.31
NF1-220ENST00000581113 PAK6Q9NQU5 681 aaPredicted RBP6.9□□□□□ -1.31
NF1-220ENST00000581113 GFOD1Q9NXC2 390 aa6.9□□□□□ -1.31
NF1-220ENST00000581113 MEIS1O00470 390 aa6.89□□□□□ -1.31
NF1-220ENST00000581113 SHOXO15266 292 aa6.89□□□□□ -1.31
NF1-220ENST00000581113 PRAMEF1O95521 474 aa6.89□□□□□ -1.31
NF1-220ENST00000581113 C6orf15Q6UXA7 325 aaPredicted RBP6.89□□□□□ -1.31
NF1-220ENST00000581113 NBPF11Q86T75 865 aa6.89□□□□□ -1.31
NF1-220ENST00000581113 TSPYL5Q86VY4 417 aaPredicted RBP6.89□□□□□ -1.31
NF1-220ENST00000581113 WFDC3Q8IUB2 231 aa6.89□□□□□ -1.31
NF1-220ENST00000581113 CKAP2LQ8IYA6 745 aa6.89□□□□□ -1.31
NF1-220ENST00000581113 KLHL6Q8WZ60 621 aa6.89□□□□□ -1.31
NF1-220ENST00000581113 HAUS7Q99871 368 aa6.89□□□□□ -1.31
NF1-220ENST00000581113 DUSP13Q9UII6 198 aa6.89□□□□□ -1.31
NF1-220ENST00000581113 SIGLEC6O43699 453 aa6.88□□□□□ -1.31
NF1-220ENST00000581113 DDAH1O94760 285 aa6.88□□□□□ -1.31
NF1-220ENST00000581113 LTKP29376 864 aa6.88□□□□□ -1.31
NF1-220ENST00000581113 GP2P55259 537 aaKnown RBP6.88□□□□□ -1.31
NF1-220ENST00000581113 ZP2Q05996 745 aa6.88□□□□□ -1.31
NF1-220ENST00000581113 FXNQ16595 210 aa6.88□□□□□ -1.31
NF1-220ENST00000581113 NOL9Q5SY16 702 aaKnown RBP6.88□□□□□ -1.31
NF1-220ENST00000581113 HEATR6Q6AI08 1181 aaKnown RBP6.88□□□□□ -1.31
NF1-220ENST00000581113 TMPRSS7Q7RTY8 843 aa6.88□□□□□ -1.31
NF1-220ENST00000581113 CREG2Q8IUH2 290 aa6.88□□□□□ -1.31
NF1-220ENST00000581113 ENOX1Q8TC92 643 aaKnown RBP6.88□□□□□ -1.31
NF1-220ENST00000581113 HDAC8Q9BY41 377 aa6.88□□□□□ -1.31
NF1-220ENST00000581113 TRIM55Q9BYV6 548 aa6.88□□□□□ -1.31
NF1-220ENST00000581113 CARS2Q9HA77 564 aaKnown RBP6.88□□□□□ -1.31
NF1-220ENST00000581113 CHST7Q9NS84 486 aa6.88□□□□□ -1.31
NF1-220ENST00000581113 MINPP1Q9UNW1 487 aa6.88□□□□□ -1.31
NF1-220ENST00000581113 ZNF451Q9Y4E5 1061 aa6.88□□□□□ -1.31
NF1-220ENST00000581113 B2RBV5 119 aa6.87□□□□□ -1.31
NF1-220ENST00000581113 CBFA2T2O43439 604 aa6.87□□□□□ -1.31
NF1-220ENST00000581113 EPHX1P07099 455 aa6.87□□□□□ -1.31
NF1-220ENST00000581113 CD247P20963 164 aa6.87□□□□□ -1.31
NF1-220ENST00000581113 PLCL1Q15111 1095 aa6.87□□□□□ -1.31
NF1-220ENST00000581113 TCEAL1Q15170 157 aa6.87□□□□□ -1.31
NF1-220ENST00000581113 ANKRD39Q53RE8 183 aa6.87□□□□□ -1.31
NF1-220ENST00000581113 FAM178BQ8IXR5 827 aa6.87□□□□□ -1.31
NF1-220ENST00000581113 AGBL5Q8NDL9 886 aa6.87□□□□□ -1.31
NF1-220ENST00000581113 SYTL5Q8TDW5 730 aaPredicted RBP6.87□□□□□ -1.31
NF1-220ENST00000581113 MICAL1Q8TDZ2 1067 aa6.87□□□□□ -1.31
NF1-220ENST00000581113 DSCC1Q9BVC3 393 aa6.87□□□□□ -1.31
NF1-220ENST00000581113 GP6Q9HCN6 339 aa6.87□□□□□ -1.31
NF1-220ENST00000581113 ST7Q9NRC1 585 aa6.87□□□□□ -1.31
NF1-220ENST00000581113 KLF4O43474 513 aa6.86□□□□□ -1.31
NF1-220ENST00000581113 NCAPHQ15003 741 aa6.86□□□□□ -1.31
NF1-220ENST00000581113 GAB4Q2WGN9 574 aa6.86□□□□□ -1.31
NF1-220ENST00000581113 ADAT2Q7Z6V5 191 aaKnown RBP6.86□□□□□ -1.31
NF1-220ENST00000581113 CELF2-AS1Q8N7Q2 184 aa6.86□□□□□ -1.31
NF1-220ENST00000581113 DAGLBQ8NCG7 672 aa6.86□□□□□ -1.31
NF1-220ENST00000581113 BRF1Q92994 677 aa6.86□□□□□ -1.31
NF1-220ENST00000581113 PRDM7Q9NQW5 492 aa6.86□□□□□ -1.31
NF1-220ENST00000581113 ESR1P03372 595 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 ITGA4P13612 1032 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 FUT4P22083 530 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 ZNF445P59923 1031 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 EGR3Q06889 387 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 RAB33AQ14088 237 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 ZNF655Q8N720 491 aaPredicted RBP6.85□□□□□ -1.31
NF1-220ENST00000581113 ADCY4Q8NFM4 1077 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 ARMC5Q96C12 935 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 TCTN2Q96GX1 697 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 FGD4Q96M96 766 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 DRC1Q96MC2 740 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 HIRIP3Q9BW71 556 aaPredicted RBP6.85□□□□□ -1.31
NF1-220ENST00000581113 GBP3Q9H0R5 595 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 PCDHA11Q9Y5I1 949 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 U2SURPO15042 1029 aaKnown RBP6.85□□□□□ -1.31
NF1-220ENST00000581113 GJB6O95452 261 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 DDR2Q16832 855 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 ABI1Q8IZP0 508 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 PI4K2BQ8TCG2 481 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 KLHL25Q9H0H3 589 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 NOL6Q9H6R4 1146 aaKnown RBP6.85□□□□□ -1.31
NF1-220ENST00000581113 PRR13Q9NZ81 148 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 LMCD1Q9NZU5 365 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 WHRNQ9P202 907 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 SUGT1Q9Y2Z0 365 aa6.85□□□□□ -1.31
NF1-220ENST00000581113 SSU72P8A0A1W2PR75 194 aa6.84□□□□□ -1.31
NF1-220ENST00000581113 ANKRD34BA5PLL1 514 aa6.84□□□□□ -1.31
NF1-220ENST00000581113 PPM1BO75688 479 aa6.84□□□□□ -1.31
NF1-220ENST00000581113 PPP2R5DQ14738 602 aa6.84□□□□□ -1.31
NF1-220ENST00000581113 FIBCD1Q8N539 461 aa6.84□□□□□ -1.31
NF1-220ENST00000581113 PPP1R14AQ96A00 147 aa6.84□□□□□ -1.31
NF1-220ENST00000581113 DNAJC2Q99543 621 aaKnown RBP6.84□□□□□ -1.31
NF1-220ENST00000581113 FHOD1Q9Y613 1164 aa6.84□□□□□ -1.31
NF1-220ENST00000581113 OAS3Q9Y6K5 1087 aaKnown RBP6.84□□□□□ -1.31
NF1-220ENST00000581113 CTSKP43235 329 aa6.83□□□□□ -1.32
NF1-220ENST00000581113 PCBP3P57721 371 aaKnown RBP6.83□□□□□ -1.32
NF1-220ENST00000581113 CWF19L1Q69YN2 538 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms