RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 USP17L11C9JVI0 530 aa16.65■□□□□ 0.26
SKA2-205ENST00000580541 USP17L18D6R9N7 530 aa16.65■□□□□ 0.26
SKA2-205ENST00000580541 USP17L22D6RA61 530 aa16.65■□□□□ 0.26
SKA2-205ENST00000580541 USP17L17D6RBQ6 530 aa16.65■□□□□ 0.26
SKA2-205ENST00000580541 USP17L19D6RCP7 530 aa16.65■□□□□ 0.26
SKA2-205ENST00000580541 USP17L20D6RJB6 530 aa16.65■□□□□ 0.26
SKA2-205ENST00000580541 NDUFB10O96000 172 aa16.65■□□□□ 0.26
SKA2-205ENST00000580541 PDHBP11177 359 aa16.65■□□□□ 0.26
SKA2-205ENST00000580541 METAP2P50579 478 aaKnown RBP eCLIP16.65■□□□□ 0.26
SKA2-205ENST00000580541 USP17L24Q0WX57 530 aa16.65■□□□□ 0.26
SKA2-205ENST00000580541 TROAPQ12815 778 aa16.65■□□□□ 0.26
SKA2-205ENST00000580541 CCDC96Q2M329 555 aa16.65■□□□□ 0.26
SKA2-205ENST00000580541 GPHNQ9NQX3 736 aaPredicted RBP16.65■□□□□ 0.26
SKA2-205ENST00000580541 FEM1BQ9UK73 627 aa16.65■□□□□ 0.26
SKA2-205ENST00000580541 MTMR7Q9Y216 660 aa16.65■□□□□ 0.26
SKA2-205ENST00000580541 PHIPQ8WWQ0 1821 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 CCL15-CCL14A0A0B4J2E2 113 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 GOLGA8BA8MQT2 603 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 PLA2G6O60733 806 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 SNHG28P0DPA3 235 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 OSBPP22059 807 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 SMARCA1P28370 1054 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 PDIA3P30101 505 aaKnown RBP16.64■□□□□ 0.25
SKA2-205ENST00000580541 MAP2K2P36507 400 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 IKQ13123 557 aaPredicted RBP16.64■□□□□ 0.25
SKA2-205ENST00000580541 COL9A3Q14050 684 aaPredicted RBP16.64■□□□□ 0.25
SKA2-205ENST00000580541 CCL15Q16663 113 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 RTN1Q16799 776 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 FAM160B2Q86V87 743 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 MICU3Q86XE3 530 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 SPICE1Q8N0Z3 855 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 SNX21Q969T3 373 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 MS4A4AQ96JQ5 239 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 CAPNS2Q96L46 248 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 ZCCHC17Q9NP64 241 aaKnown RBP16.64■□□□□ 0.25
SKA2-205ENST00000580541 HOXC10Q9NYD6 342 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 PNMA3Q9UL41 463 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 BRPF3Q9ULD4 1205 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 SLC45A1Q9Y2W3 748 aa16.64■□□□□ 0.25
SKA2-205ENST00000580541 TESPA1A2RU30 521 aaPredicted RBP16.63■□□□□ 0.25
SKA2-205ENST00000580541 GOLGA8AA7E2F4 631 aa16.63■□□□□ 0.25
SKA2-205ENST00000580541 CPLX1O14810 134 aa16.63■□□□□ 0.25
SKA2-205ENST00000580541 FDX1P10109 184 aa16.63■□□□□ 0.25
SKA2-205ENST00000580541 VCAM1P19320 739 aa16.63■□□□□ 0.25
SKA2-205ENST00000580541 HOXA7P31268 230 aaPredicted RBP16.63■□□□□ 0.25
SKA2-205ENST00000580541 GJA5P36382 358 aa16.63■□□□□ 0.25
SKA2-205ENST00000580541 ZNF543Q08ER8 600 aa16.63■□□□□ 0.25
SKA2-205ENST00000580541 MKRN3Q13064 507 aaKnown RBP16.63■□□□□ 0.25
SKA2-205ENST00000580541 BECN1Q14457 450 aa16.63■□□□□ 0.25
SKA2-205ENST00000580541 GRM4Q14833 912 aa16.63■□□□□ 0.25
SKA2-205ENST00000580541 CYP4F22Q6NT55 531 aa16.63■□□□□ 0.25
SKA2-205ENST00000580541 HSCBQ8IWL3 235 aa16.63■□□□□ 0.25
SKA2-205ENST00000580541 TANGO6Q9C0B7 1094 aa16.63■□□□□ 0.25
SKA2-205ENST00000580541 SENP2Q9HC62 589 aa16.63■□□□□ 0.25
SKA2-205ENST00000580541 AGTPBP1Q9UPW5 1226 aa16.63■□□□□ 0.25
SKA2-205ENST00000580541 PALM3A6NDB9 673 aaPredicted RBP16.62■□□□□ 0.25
SKA2-205ENST00000580541 FAM155AB1AL88 458 aaPredicted RBP16.62■□□□□ 0.25
SKA2-205ENST00000580541 CDKL5O76039 1030 aa16.62■□□□□ 0.25
SKA2-205ENST00000580541 STAT2P52630 851 aa16.62■□□□□ 0.25
SKA2-205ENST00000580541 IRX3P78415 501 aaPredicted RBP16.62■□□□□ 0.25
SKA2-205ENST00000580541 GRM1Q13255 1194 aa16.62■□□□□ 0.25
SKA2-205ENST00000580541 COG2Q14746 738 aa16.62■□□□□ 0.25
SKA2-205ENST00000580541 ANKRD23Q86SG2 305 aa16.62■□□□□ 0.25
SKA2-205ENST00000580541 PRPF38AQ8NAV1 312 aaKnown RBP16.62■□□□□ 0.25
SKA2-205ENST00000580541 RPAP3Q9H6T3 665 aaPredicted RBP16.62■□□□□ 0.25
SKA2-205ENST00000580541 TPCN1Q9ULQ1 816 aa16.62■□□□□ 0.25
SKA2-205ENST00000580541 CTDP1Q9Y5B0 961 aaPredicted RBP16.62■□□□□ 0.25
SKA2-205ENST00000580541 TMEM232C9JQI7 657 aa16.61■□□□□ 0.25
SKA2-205ENST00000580541 KLRF2D3W0D1 207 aa16.61■□□□□ 0.25
SKA2-205ENST00000580541 PFKFB2O60825 505 aa16.61■□□□□ 0.25
SKA2-205ENST00000580541 ALDH1A1P00352 501 aa16.61■□□□□ 0.25
SKA2-205ENST00000580541 ANP32AP39687 249 aaKnown RBP16.61■□□□□ 0.25
SKA2-205ENST00000580541 TM4SF4P48230 202 aa16.61■□□□□ 0.25
SKA2-205ENST00000580541 TRAF1Q13077 416 aa16.61■□□□□ 0.25
SKA2-205ENST00000580541 FAM83BQ5T0W9 1011 aa16.61■□□□□ 0.25
SKA2-205ENST00000580541 CATSPERGQ6ZRH7 1159 aa16.61■□□□□ 0.25
SKA2-205ENST00000580541 NOL8Q76FK4 1167 aaKnown RBP16.61■□□□□ 0.25
SKA2-205ENST00000580541 GTF3C2Q8WUA4 911 aaPredicted RBP16.61■□□□□ 0.25
SKA2-205ENST00000580541 RBM27Q9P2N5 1060 aaKnown RBP16.61■□□□□ 0.25
SKA2-205ENST00000580541 PNMA2Q9UL42 364 aa16.61■□□□□ 0.25
SKA2-205ENST00000580541 WDR33Q9C0J8 1336 aaKnown RBP16.61■□□□□ 0.25
SKA2-205ENST00000580541 FLOT1O75955 427 aa16.6■□□□□ 0.25
SKA2-205ENST00000580541 AKAP17AQ02040 695 aaKnown RBP16.6■□□□□ 0.25
SKA2-205ENST00000580541 KIF23Q02241 960 aaPredicted RBP16.6■□□□□ 0.25
SKA2-205ENST00000580541 BTNL9Q6UXG8 535 aa16.6■□□□□ 0.25
SKA2-205ENST00000580541 KCTD1Q719H9 257 aa16.6■□□□□ 0.25
SKA2-205ENST00000580541 SLF1Q9BQI6 1058 aa16.6■□□□□ 0.25
SKA2-205ENST00000580541 LARP6Q9BRS8 491 aaKnown RBP16.6■□□□□ 0.25
SKA2-205ENST00000580541 MYL10Q9BUA6 226 aa16.6■□□□□ 0.25
SKA2-205ENST00000580541 GPCPD1Q9NPB8 672 aa16.6■□□□□ 0.25
SKA2-205ENST00000580541 MAD2L2Q9UI95 211 aa16.6■□□□□ 0.25
SKA2-205ENST00000580541 MYPNQ86TC9 1320 aa16.6■□□□□ 0.25
SKA2-205ENST00000580541 CCT2P78371 535 aaKnown RBP16.59■□□□□ 0.25
SKA2-205ENST00000580541 STK3Q13188 491 aa16.59■□□□□ 0.25
SKA2-205ENST00000580541 ME3Q16798 604 aa16.59■□□□□ 0.25
SKA2-205ENST00000580541 CCDC144CPQ8IYA2 1237 aa16.59■□□□□ 0.25
SKA2-205ENST00000580541 TRIM22Q8IYM9 498 aa16.59■□□□□ 0.25
SKA2-205ENST00000580541 MB21D1Q8N884 522 aa16.59■□□□□ 0.25
SKA2-205ENST00000580541 BRI3BPQ8WY22 251 aa16.59■□□□□ 0.25
SKA2-205ENST00000580541 HPS5Q9UPZ3 1129 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms