RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 SENP2Q9HC62 589 aa12.23□□□□□ -0.45
CDH3-210ENST00000569117 ARHGEF10LQ9HCE6 1279 aa12.23□□□□□ -0.45
CDH3-210ENST00000569117 PARP14Q460N5 1801 aa12.23□□□□□ -0.45
CDH3-210ENST00000569117 C19orf67A6NJJ6 358 aa12.22□□□□□ -0.45
CDH3-210ENST00000569117 TRAK2O60296 914 aa12.22□□□□□ -0.45
CDH3-210ENST00000569117 PTGDRQ13258 359 aa12.22□□□□□ -0.45
CDH3-210ENST00000569117 SIAH1Q8IUQ4 282 aa12.22□□□□□ -0.45
CDH3-210ENST00000569117 PNMA1Q8ND90 353 aa12.22□□□□□ -0.45
CDH3-210ENST00000569117 OXER1Q8TDS5 423 aa12.22□□□□□ -0.45
CDH3-210ENST00000569117 SNX21Q969T3 373 aa12.22□□□□□ -0.45
CDH3-210ENST00000569117 MKL1Q969V6 931 aa12.22□□□□□ -0.45
CDH3-210ENST00000569117 CLMNQ96JQ2 1002 aa12.22□□□□□ -0.45
CDH3-210ENST00000569117 TMEM47Q9BQJ4 181 aa12.22□□□□□ -0.45
CDH3-210ENST00000569117 WDR18Q9BV38 432 aa12.22□□□□□ -0.45
CDH3-210ENST00000569117 KAT14Q9H8E8 782 aa12.22□□□□□ -0.45
CDH3-210ENST00000569117 AS3MTQ9HBK9 375 aa12.22□□□□□ -0.45
CDH3-210ENST00000569117 KLF18A0A0U1RQI7 1052 aa12.21□□□□□ -0.45
CDH3-210ENST00000569117 A0A1W2PRG0 241 aa12.21□□□□□ -0.45
CDH3-210ENST00000569117 CCDC69A6NI79 296 aa12.21□□□□□ -0.45
CDH3-210ENST00000569117 GOLGA8BA8MQT2 603 aa12.21□□□□□ -0.45
CDH3-210ENST00000569117 UBE2Q2LH0YL09 131 aa12.21□□□□□ -0.45
CDH3-210ENST00000569117 DDAH1O94760 285 aa12.21□□□□□ -0.45
CDH3-210ENST00000569117 APOBRQ0VD83 1088 aa12.21□□□□□ -0.45
CDH3-210ENST00000569117 NFXL1Q6ZNB6 911 aa12.21□□□□□ -0.45
CDH3-210ENST00000569117 CCDC84Q86UT8 332 aaPredicted RBP12.21□□□□□ -0.45
CDH3-210ENST00000569117 ERO1BQ86YB8 467 aa12.21□□□□□ -0.45
CDH3-210ENST00000569117 ZNF654Q8IZM8 581 aa12.21□□□□□ -0.45
CDH3-210ENST00000569117 LRRC47Q8N1G4 583 aaKnown RBP12.21□□□□□ -0.45
CDH3-210ENST00000569117 GMCL1P1Q8NEA9 526 aa12.21□□□□□ -0.45
CDH3-210ENST00000569117 KIAA1683Q9H0B3 1180 aa12.21□□□□□ -0.45
CDH3-210ENST00000569117 ELP3Q9H9T3 547 aa12.21□□□□□ -0.45
CDH3-210ENST00000569117 CLIP2Q9UDT6 1046 aa12.21□□□□□ -0.45
CDH3-210ENST00000569117 BRPF3Q9ULD4 1205 aa12.21□□□□□ -0.45
CDH3-210ENST00000569117 TPCN1Q9ULQ1 816 aa12.21□□□□□ -0.45
CDH3-210ENST00000569117 LIMCH1Q9UPQ0 1083 aa12.21□□□□□ -0.45
CDH3-210ENST00000569117 TMX2Q9Y320 296 aa12.21□□□□□ -0.45
CDH3-210ENST00000569117 CALM1P0DP23 149 aa12.2□□□□□ -0.46
CDH3-210ENST00000569117 CALM2P0DP24 149 aa12.2□□□□□ -0.46
CDH3-210ENST00000569117 CALM3P0DP25 149 aa12.2□□□□□ -0.46
CDH3-210ENST00000569117 SNHG28P0DPA3 235 aa12.2□□□□□ -0.46
CDH3-210ENST00000569117 ECE1P42892 770 aa12.2□□□□□ -0.46
CDH3-210ENST00000569117 ATP2B2Q01814 1243 aa12.2□□□□□ -0.46
CDH3-210ENST00000569117 PPATQ06203 517 aa12.2□□□□□ -0.46
CDH3-210ENST00000569117 TROAPQ12815 778 aa12.2□□□□□ -0.46
CDH3-210ENST00000569117 PPIL2Q13356 520 aa12.2□□□□□ -0.46
CDH3-210ENST00000569117 NOL8Q76FK4 1167 aaKnown RBP12.2□□□□□ -0.46
CDH3-210ENST00000569117 CATIPQ7Z7H3 387 aa12.2□□□□□ -0.46
CDH3-210ENST00000569117 SAPCD2Q86UD0 394 aa12.2□□□□□ -0.46
CDH3-210ENST00000569117 ZNF280CQ8ND82 737 aa12.2□□□□□ -0.46
CDH3-210ENST00000569117 ACER1Q8TDN7 264 aa12.2□□□□□ -0.46
CDH3-210ENST00000569117 ZNF274Q96GC6 653 aaPredicted RBP12.2□□□□□ -0.46
CDH3-210ENST00000569117 MAP3K14Q99558 947 aa12.2□□□□□ -0.46
CDH3-210ENST00000569117 FEZ1Q99689 392 aa12.2□□□□□ -0.46
CDH3-210ENST00000569117 REPIN1Q9BWE0 567 aaKnown RBP12.2□□□□□ -0.46
CDH3-210ENST00000569117 AFG3L2Q9Y4W6 797 aa12.2□□□□□ -0.46
CDH3-210ENST00000569117 SLC12A7Q9Y666 1083 aa12.2□□□□□ -0.46
CDH3-210ENST00000569117 TLL2Q9Y6L7 1015 aa12.2□□□□□ -0.46
CDH3-210ENST00000569117 TMEM88BA6NKF7 163 aa12.19□□□□□ -0.46
CDH3-210ENST00000569117 USP17L10C9JJH3 530 aa12.19□□□□□ -0.46
CDH3-210ENST00000569117 K7ELQ4 463 aaPredicted RBP12.19□□□□□ -0.46
CDH3-210ENST00000569117 ZBTB43O43298 467 aa12.19□□□□□ -0.46
CDH3-210ENST00000569117 LARGE1O95461 756 aa12.19□□□□□ -0.46
CDH3-210ENST00000569117 PDIA3P30101 505 aaKnown RBP12.19□□□□□ -0.46
CDH3-210ENST00000569117 ANP32AP39687 249 aaKnown RBP12.19□□□□□ -0.46
CDH3-210ENST00000569117 HUNKP57058 714 aa12.19□□□□□ -0.46
CDH3-210ENST00000569117 MTMR2Q13614 643 aa12.19□□□□□ -0.46
CDH3-210ENST00000569117 SYNE3Q6ZMZ3 975 aa12.19□□□□□ -0.46
CDH3-210ENST00000569117 MICU3Q86XE3 530 aa12.19□□□□□ -0.46
CDH3-210ENST00000569117 OPTNQ96CV9 577 aa12.19□□□□□ -0.46
CDH3-210ENST00000569117 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
CDH3-210ENST00000569117 HHIPL1Q96JK4 782 aa12.19□□□□□ -0.46
CDH3-210ENST00000569117 C12orf42Q96LP6 360 aa12.19□□□□□ -0.46
CDH3-210ENST00000569117 ZSCAN31Q96LW9 406 aaPredicted RBP12.19□□□□□ -0.46
CDH3-210ENST00000569117 VCPKMTQ9H867 229 aa12.19□□□□□ -0.46
CDH3-210ENST00000569117 SH2B1Q9NRF2 756 aaPredicted RBP12.19□□□□□ -0.46
CDH3-210ENST00000569117 HPS5Q9UPZ3 1129 aa12.19□□□□□ -0.46
CDH3-210ENST00000569117 KCNH4Q9UQ05 1017 aa12.19□□□□□ -0.46
CDH3-210ENST00000569117 RBM19Q9Y4C8 960 aaKnown RBP12.19□□□□□ -0.46
CDH3-210ENST00000569117 ZHX2Q9Y6X8 837 aa12.19□□□□□ -0.46
CDH3-210ENST00000569117 THSD7BQ9C0I4 1608 aa12.19□□□□□ -0.46
CDH3-210ENST00000569117 A0A0G2JMZ2 1700 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 MYH6P13533 1939 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 RLFQ13129 1914 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 TRIM75PA6NK02 468 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 NDUFB10O96000 172 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 ZBTB48P10074 688 aaPredicted RBP12.18□□□□□ -0.46
CDH3-210ENST00000569117 PDHBP11177 359 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 PDIA4P13667 645 aaKnown RBP12.18□□□□□ -0.46
CDH3-210ENST00000569117 METAP2P50579 478 aaKnown RBP eCLIP12.18□□□□□ -0.46
CDH3-210ENST00000569117 USP14P54578 494 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 BACE1P56817 501 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 SPP2Q13103 211 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 GRM4Q14833 912 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 ME3Q16798 604 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 SH3D19Q5HYK7 790 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 RASGRP2Q7LDG7 609 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 HSCBQ8IWL3 235 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 CCDC82Q8N4S0 544 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 DCAF4Q8WV16 495 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 LPAR1Q92633 364 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms