RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 KCNH3Q9ULD8 1083 aa6.21□□□□□ -1.42
HERPUD1-212ENST00000567944 MINPP1Q9UNW1 487 aa6.21□□□□□ -1.42
HERPUD1-212ENST00000567944 SLC12A7Q9Y666 1083 aa6.21□□□□□ -1.42
HERPUD1-212ENST00000567944 ESR1P03372 595 aa6.2□□□□□ -1.42
HERPUD1-212ENST00000567944 TP53P04637 393 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-212ENST00000567944 RBL2Q08999 1139 aa6.2□□□□□ -1.42
HERPUD1-212ENST00000567944 NMIQ13287 307 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-212ENST00000567944 TNNI3KQ59H18 835 aa6.2□□□□□ -1.42
HERPUD1-212ENST00000567944 ANKS3Q6ZW76 656 aa6.2□□□□□ -1.42
HERPUD1-212ENST00000567944 TSPYL5Q86VY4 417 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-212ENST00000567944 ZNF513Q8N8E2 541 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-212ENST00000567944 HDAC8Q9BY41 377 aa6.2□□□□□ -1.42
HERPUD1-212ENST00000567944 MKRN2Q9H000 416 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-212ENST00000567944 ACTR10Q9NZ32 417 aa6.2□□□□□ -1.42
HERPUD1-212ENST00000567944 ZSWIM5Q9P217 1185 aa6.2□□□□□ -1.42
HERPUD1-212ENST00000567944 SLC5A6Q9Y289 635 aa6.2□□□□□ -1.42
HERPUD1-212ENST00000567944 ZNF451Q9Y4E5 1061 aa6.2□□□□□ -1.42
HERPUD1-212ENST00000567944 B2RBV5 119 aa6.19□□□□□ -1.42
HERPUD1-212ENST00000567944 WNT11O96014 354 aa6.19□□□□□ -1.42
HERPUD1-212ENST00000567944 ATP2B1P20020 1258 aa6.19□□□□□ -1.42
HERPUD1-212ENST00000567944 SLC7A5Q01650 507 aa6.19□□□□□ -1.42
HERPUD1-212ENST00000567944 GNPTABQ3T906 1256 aa6.19□□□□□ -1.42
HERPUD1-212ENST00000567944 CCDC144CPQ8IYA2 1237 aa6.19□□□□□ -1.42
HERPUD1-212ENST00000567944 C7orf61Q8IZ16 206 aa6.19□□□□□ -1.42
HERPUD1-212ENST00000567944 STK11IPQ8N1F8 1099 aa6.19□□□□□ -1.42
HERPUD1-212ENST00000567944 SREK1Q8WXA9 508 aaKnown RBP6.19□□□□□ -1.42
HERPUD1-212ENST00000567944 KLHL25Q9H0H3 589 aa6.19□□□□□ -1.42
HERPUD1-212ENST00000567944 SIGLEC6O43699 453 aa6.18□□□□□ -1.42
HERPUD1-212ENST00000567944 PRAMEF1O95521 474 aa6.18□□□□□ -1.42
HERPUD1-212ENST00000567944 TPP2P29144 1249 aaPredicted RBP6.18□□□□□ -1.42
HERPUD1-212ENST00000567944 ZNF445P59923 1031 aa6.18□□□□□ -1.42
HERPUD1-212ENST00000567944 BBS9Q3SYG4 887 aa6.18□□□□□ -1.42
HERPUD1-212ENST00000567944 MRM1Q6IN84 353 aaKnown RBP6.18□□□□□ -1.42
HERPUD1-212ENST00000567944 VHLLQ6RSH7 139 aa6.18□□□□□ -1.42
HERPUD1-212ENST00000567944 C6orf15Q6UXA7 325 aaPredicted RBP6.18□□□□□ -1.42
HERPUD1-212ENST00000567944 FLCNQ8NFG4 579 aa6.18□□□□□ -1.42
HERPUD1-212ENST00000567944 SYTL5Q8TDW5 730 aaPredicted RBP6.18□□□□□ -1.42
HERPUD1-212ENST00000567944 ASB11Q8WXH4 323 aa6.18□□□□□ -1.42
HERPUD1-212ENST00000567944 SMARCC1Q92922 1105 aaPredicted RBP6.18□□□□□ -1.42
HERPUD1-212ENST00000567944 ARMC5Q96C12 935 aa6.18□□□□□ -1.42
HERPUD1-212ENST00000567944 FMNL2Q96PY5 1086 aa6.18□□□□□ -1.42
HERPUD1-212ENST00000567944 HAUS7Q99871 368 aa6.18□□□□□ -1.42
HERPUD1-212ENST00000567944 GP6Q9HCN6 339 aa6.18□□□□□ -1.42
HERPUD1-212ENST00000567944 GPATCH2Q9NW75 528 aa6.18□□□□□ -1.42
HERPUD1-212ENST00000567944 GFOD1Q9NXC2 390 aa6.18□□□□□ -1.42
HERPUD1-212ENST00000567944 ADAMTS6Q9UKP5 1117 aa6.18□□□□□ -1.42
HERPUD1-212ENST00000567944 EPHX1P07099 455 aa6.17□□□□□ -1.42
HERPUD1-212ENST00000567944 CD247P20963 164 aa6.17□□□□□ -1.42
HERPUD1-212ENST00000567944 FUT4P22083 530 aa6.17□□□□□ -1.42
HERPUD1-212ENST00000567944 GTF2F1P35269 517 aaKnown RBP eCLIP6.17□□□□□ -1.42
HERPUD1-212ENST00000567944 CTSKP43235 329 aa6.17□□□□□ -1.42
HERPUD1-212ENST00000567944 RAB33AQ14088 237 aa6.17□□□□□ -1.42
HERPUD1-212ENST00000567944 KIAA1211LQ6NV74 962 aa6.17□□□□□ -1.42
HERPUD1-212ENST00000567944 FAM178BQ8IXR5 827 aa6.17□□□□□ -1.42
HERPUD1-212ENST00000567944 DAGLBQ8NCG7 672 aa6.17□□□□□ -1.42
HERPUD1-212ENST00000567944 ENOX1Q8TC92 643 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-212ENST00000567944 ZNF281Q9Y2X9 895 aa6.17□□□□□ -1.42
HERPUD1-212ENST00000567944 PCDHB12Q9Y5F1 795 aa6.17□□□□□ -1.42
HERPUD1-212ENST00000567944 OAS3Q9Y6K5 1087 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-212ENST00000567944 STK10O94804 968 aaKnown RBP6.16□□□□□ -1.42
HERPUD1-212ENST00000567944 GJB6O95452 261 aa6.16□□□□□ -1.42
HERPUD1-212ENST00000567944 GP2P55259 537 aaKnown RBP6.16□□□□□ -1.42
HERPUD1-212ENST00000567944 CHMP4BP1P59074 171 aa6.16□□□□□ -1.42
HERPUD1-212ENST00000567944 IKZF1Q13422 519 aa6.16□□□□□ -1.42
HERPUD1-212ENST00000567944 LARP1BQ659C4 914 aaKnown RBP6.16□□□□□ -1.42
HERPUD1-212ENST00000567944 TMPRSS7Q7RTY8 843 aa6.16□□□□□ -1.42
HERPUD1-212ENST00000567944 ABI1Q8IZP0 508 aa6.16□□□□□ -1.42
HERPUD1-212ENST00000567944 USHBP1Q8N6Y0 703 aa6.16□□□□□ -1.42
HERPUD1-212ENST00000567944 TCTN2Q96GX1 697 aa6.16□□□□□ -1.42
HERPUD1-212ENST00000567944 TRIT1Q9H3H1 467 aaKnown RBP6.16□□□□□ -1.42
HERPUD1-212ENST00000567944 PRDM7Q9NQW5 492 aa6.16□□□□□ -1.42
HERPUD1-212ENST00000567944 CHST7Q9NS84 486 aa6.16□□□□□ -1.42
HERPUD1-212ENST00000567944 PRR13Q9NZ81 148 aa6.16□□□□□ -1.42
HERPUD1-212ENST00000567944 LMCD1Q9NZU5 365 aa6.16□□□□□ -1.42
HERPUD1-212ENST00000567944 ANGEL1Q9UNK9 670 aaKnown RBP6.16□□□□□ -1.42
HERPUD1-212ENST00000567944 PCDHA11Q9Y5I1 949 aa6.16□□□□□ -1.42
HERPUD1-212ENST00000567944 SERINC3Q13530 473 aa6.15□□□□□ -1.42
HERPUD1-212ENST00000567944 NCAPHQ15003 741 aa6.15□□□□□ -1.42
HERPUD1-212ENST00000567944 SF3A1Q15459 793 aaKnown RBP6.15□□□□□ -1.42
HERPUD1-212ENST00000567944 FXNQ16595 210 aa6.15□□□□□ -1.42
HERPUD1-212ENST00000567944 DDR2Q16832 855 aa6.15□□□□□ -1.42
HERPUD1-212ENST00000567944 ZNF655Q8N720 491 aaPredicted RBP6.15□□□□□ -1.42
HERPUD1-212ENST00000567944 BRF1Q92994 677 aa6.15□□□□□ -1.42
HERPUD1-212ENST00000567944 CARS2Q9HA77 564 aaKnown RBP6.15□□□□□ -1.42
HERPUD1-212ENST00000567944 ST7Q9NRC1 585 aa6.15□□□□□ -1.42
HERPUD1-212ENST00000567944 MBNL3Q9NUK0 354 aaKnown RBP6.15□□□□□ -1.42
HERPUD1-212ENST00000567944 APEX2Q9UBZ4 518 aa6.15□□□□□ -1.42
HERPUD1-212ENST00000567944 FBXL21Q9UKT6 434 aa6.15□□□□□ -1.42
HERPUD1-212ENST00000567944 TEKQ02763 1124 aa6.14□□□□□ -1.43
HERPUD1-212ENST00000567944 ZP2Q05996 745 aa6.14□□□□□ -1.43
HERPUD1-212ENST00000567944 FZD5Q13467 585 aa6.14□□□□□ -1.43
HERPUD1-212ENST00000567944 ANGEL2Q5VTE6 544 aaKnown RBP6.14□□□□□ -1.43
HERPUD1-212ENST00000567944 CREG2Q8IUH2 290 aa6.14□□□□□ -1.43
HERPUD1-212ENST00000567944 FGD4Q96M96 766 aa6.14□□□□□ -1.43
HERPUD1-212ENST00000567944 C19orf73Q9NVV2 129 aa6.14□□□□□ -1.43
HERPUD1-212ENST00000567944 DUSP13Q9UII6 198 aa6.14□□□□□ -1.43
HERPUD1-212ENST00000567944 MSRB2Q9Y3D2 182 aa6.14□□□□□ -1.43
HERPUD1-212ENST00000567944 FHOD1Q9Y613 1164 aa6.14□□□□□ -1.43
HERPUD1-212ENST00000567944 ARID1BQ8NFD5 2236 aaPredicted RBP6.14□□□□□ -1.43
HERPUD1-212ENST00000567944 A0A087WZG4 1122 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms