RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 ARHGAP24Q8N264 748 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 RTEL1Q9NZ71 1219 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 ANKFY1Q9P2R3 1169 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 TSKSQ9UJT2 592 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 K7ENM7 598 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 NDUFAB1O14561 156 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 TMOD1P28289 359 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 HADHQ16836 314 aaKnown RBP12.4□□□□□ -0.42
RPAP1-204ENST00000562303 CFAP221Q4G0U5 840 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 NUCKS1Q9H1E3 243 aaKnown RBP12.4□□□□□ -0.42
RPAP1-204ENST00000562303 NFE2L3Q9Y4A8 694 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 ZMYM3Q14202 1370 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 ARHGEF6Q15052 776 aa12.4□□□□□ -0.42
RPAP1-204ENST00000562303 CERKLQ49MI3 558 aaPredicted RBP12.4□□□□□ -0.42
RPAP1-204ENST00000562303 NOP9Q86U38 636 aaKnown RBP12.4□□□□□ -0.42
RPAP1-204ENST00000562303 IFNB1P01574 187 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 ATP2B4P23634 1241 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 TSTA3Q13630 321 aaPredicted RBP12.39□□□□□ -0.43
RPAP1-204ENST00000562303 FAM173BQ6P4H8 233 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 GBP6Q6ZN66 633 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 SKA2Q8WVK7 121 aaPredicted RBP12.39□□□□□ -0.43
RPAP1-204ENST00000562303 PFDN6O15212 129 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 XRCC5P13010 732 aaKnown RBP12.39□□□□□ -0.43
RPAP1-204ENST00000562303 PAK2Q13177 524 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 RBBP5Q15291 538 aaKnown RBP12.39□□□□□ -0.43
RPAP1-204ENST00000562303 CCDC170Q8IYT3 715 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 KRT12Q99456 494 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 NCAPGQ9BPX3 1015 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 AMFRQ9UKV5 643 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 USP19O94966 1318 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 USP17L12C9JPN9 530 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 USP17L21D6R901 530 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 KIF3CO14782 793 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 ZBTB7BO15156 539 aaPredicted RBP12.39□□□□□ -0.43
RPAP1-204ENST00000562303 CTSWP56202 376 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 C8orf34Q49A92 452 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 ABI1Q8IZP0 508 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 OTUD7AQ8TE49 926 aaPredicted RBP12.39□□□□□ -0.43
RPAP1-204ENST00000562303 SLF1Q9BQI6 1058 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 PLCB1Q9NQ66 1216 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 C1orf112Q9NSG2 853 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 NUP160Q12769 1436 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 U2AF2P26368 475 aaKnown RBP eCLIP12.39□□□□□ -0.432e-6■■■■□ 26
RPAP1-204ENST00000562303 STAT1P42224 750 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 MCTP2Q6DN12 878 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 LRRC47Q8N1G4 583 aaKnown RBP12.39□□□□□ -0.43
RPAP1-204ENST00000562303 P3H4Q92791 437 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 RPS6KC1Q96S38 1066 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 TEKT3Q9BXF9 490 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 THRAP3Q9Y2W1 955 aaKnown RBP12.39□□□□□ -0.43
RPAP1-204ENST00000562303 H0YCG3 227 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 TMEM191BP0C7N4 346 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 ABCB4P21439 1286 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 DDX17Q92841 729 aaKnown RBP12.39□□□□□ -0.43
RPAP1-204ENST00000562303 CCDC68Q9H2F9 335 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 NRBP2Q9NSY0 501 aa12.39□□□□□ -0.43
RPAP1-204ENST00000562303 KDRP35968 1356 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 AOX1Q06278 1338 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 SH2D4BQ5SQS7 431 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 DPP9Q86TI2 863 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 FBXO11Q86XK2 927 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 ERO1AQ96HE7 468 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 APOL6Q9BWW8 343 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 POLGP54098 1239 aaPredicted RBP12.38□□□□□ -0.43
RPAP1-204ENST00000562303 MTMR3Q13615 1198 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 FAM160B1Q5W0V3 765 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 NME8Q8N427 588 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 HAUS1Q96CS2 278 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 PPP1R12CQ9BZL4 782 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 UHRF1BP1Q6BDS2 1440 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 ARHGEF10O15013 1369 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 SYNJ2BP-COX16A0A087WUM0 186 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 TECP42680 631 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 ANKRD20A3Q5VUR7 823 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 DENND2CQ68D51 928 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 LMNTD2Q8IXW0 634 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 TRMT44Q8IYL2 757 aaKnown RBP12.38□□□□□ -0.43
RPAP1-204ENST00000562303 COX16Q9P0S2 106 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 PARP2Q9UGN5 583 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 ICA1Q05084 483 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 NXNQ6DKJ4 435 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 SLFN12Q8IYM2 578 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 MYOCDQ8IZQ8 938 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 SCYL1Q96KG9 808 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 ZSCAN10Q96SZ4 725 aaPredicted RBP12.38□□□□□ -0.43
RPAP1-204ENST00000562303 IFIH1Q9BYX4 1025 aaKnown RBP12.38□□□□□ -0.43
RPAP1-204ENST00000562303 RIC8AQ9NPQ8 531 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 PRKAG2Q9UGJ0 569 aa12.38□□□□□ -0.43
RPAP1-204ENST00000562303 TXNDC9O14530 226 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 XPAP23025 273 aaPredicted RBP12.37□□□□□ -0.43
RPAP1-204ENST00000562303 TMCO4Q5TGY1 634 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 ZNF654Q8IZM8 581 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 PPP4R1Q8TF05 950 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 CARD6Q9BX69 1037 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 GPATCH8Q9UKJ3 1502 aaKnown RBP12.37□□□□□ -0.43
RPAP1-204ENST00000562303 LRRIQ4A6NIV6 560 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 E7EWF7 191 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 GSTA1P08263 222 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 GSTA2P09210 222 aa12.37□□□□□ -0.43
RPAP1-204ENST00000562303 DLATP10515 647 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms