RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 MCM5P33992 734 aa14.37□□□□□ -0.11
RCCD1-209ENST00000557750 PSMC4P43686 418 aa14.37□□□□□ -0.11
RCCD1-209ENST00000557750 GPAT2Q6NUI2 795 aa14.37□□□□□ -0.11
RCCD1-209ENST00000557750 ANKRD23Q86SG2 305 aa14.37□□□□□ -0.11
RCCD1-209ENST00000557750 LPAR1Q92633 364 aa14.37□□□□□ -0.11
RCCD1-209ENST00000557750 MKL1Q969V6 931 aa14.37□□□□□ -0.11
RCCD1-209ENST00000557750 C12orf42Q96LP6 360 aa14.37□□□□□ -0.11
RCCD1-209ENST00000557750 JAKMIP1Q96N16 626 aaKnown RBP14.37□□□□□ -0.11
RCCD1-209ENST00000557750 TTC14Q96N46 770 aa14.37□□□□□ -0.11
RCCD1-209ENST00000557750 MYH8P13535 1937 aa14.37□□□□□ -0.11
RCCD1-209ENST00000557750 F5H6K3 240 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 PRC1O43663 620 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 TOP1P11387 765 aaKnown RBP14.36□□□□□ -0.11
RCCD1-209ENST00000557750 NOVP48745 357 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 KLRC3Q07444 240 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 PABPC4Q13310 644 aaKnown RBP eCLIP14.36□□□□□ -0.113e-8■■■■□ 22.1
RCCD1-209ENST00000557750 DGKHQ86XP1 1220 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 ENAHQ8N8S7 591 aaPredicted RBP14.36□□□□□ -0.11
RCCD1-209ENST00000557750 TMEM47Q9BQJ4 181 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 SRRDQ9UH36 339 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 SYNPO2Q9UMS6 1093 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 MTMR7Q9Y216 660 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 ADGRA2Q96PE1 1338 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 FMNL1O95466 1100 aaPredicted RBP14.36□□□□□ -0.11
RCCD1-209ENST00000557750 NDUFB10O96000 172 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 HMGB1P09429 215 aaKnown RBP14.36□□□□□ -0.11
RCCD1-209ENST00000557750 OSBPP22059 807 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 PSMA5P28066 241 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 ANTXR2P58335 489 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 COL9A3Q14050 684 aaPredicted RBP14.36□□□□□ -0.11
RCCD1-209ENST00000557750 TMEM67Q5HYA8 995 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 KIAA1755Q5JYT7 1200 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 IFIT1BQ5T764 474 aaKnown RBP14.36□□□□□ -0.11
RCCD1-209ENST00000557750 RCSD1Q6JBY9 416 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 CHRDL2Q6WN34 429 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 CHMP4CQ96CF2 233 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 RPAP3Q9H6T3 665 aaPredicted RBP14.36□□□□□ -0.11
RCCD1-209ENST00000557750 KAT14Q9H8E8 782 aa14.36□□□□□ -0.11
RCCD1-209ENST00000557750 UPF2Q9HAU5 1272 aaKnown RBP14.36□□□□□ -0.11
RCCD1-209ENST00000557750 ISY1Q9ULR0 285 aaKnown RBP14.36□□□□□ -0.11
RCCD1-209ENST00000557750 GREB1LQ9C091 1923 aaPredicted RBP14.35□□□□□ -0.11
RCCD1-209ENST00000557750 WDR46O15213 610 aaKnown RBP14.35□□□□□ -0.11
RCCD1-209ENST00000557750 IRX3P78415 501 aaPredicted RBP14.35□□□□□ -0.11
RCCD1-209ENST00000557750 WTAPQ15007 396 aa14.35□□□□□ -0.11
RCCD1-209ENST00000557750 SLFN13Q68D06 897 aa14.35□□□□□ -0.11
RCCD1-209ENST00000557750 BLOC1S2Q6QNY1 142 aa14.35□□□□□ -0.11
RCCD1-209ENST00000557750 DHX32Q7L7V1 743 aaKnown RBP14.35□□□□□ -0.11
RCCD1-209ENST00000557750 GMCL1P1Q8NEA9 526 aa14.35□□□□□ -0.11
RCCD1-209ENST00000557750 DPF3Q92784 378 aa14.35□□□□□ -0.11
RCCD1-209ENST00000557750 TANGO6Q9C0B7 1094 aa14.35□□□□□ -0.11
RCCD1-209ENST00000557750 PNMA3Q9UL41 463 aa14.35□□□□□ -0.11
RCCD1-209ENST00000557750 PHIPQ8WWQ0 1821 aa14.35□□□□□ -0.11
RCCD1-209ENST00000557750 USP17L15C9J2P7 530 aa14.34□□□□□ -0.11
RCCD1-209ENST00000557750 USP17L13C9JLJ4 530 aa14.34□□□□□ -0.11
RCCD1-209ENST00000557750 USP17L11C9JVI0 530 aa14.34□□□□□ -0.11
RCCD1-209ENST00000557750 USP17L18D6R9N7 530 aa14.34□□□□□ -0.11
RCCD1-209ENST00000557750 USP17L22D6RA61 530 aa14.34□□□□□ -0.11
RCCD1-209ENST00000557750 USP17L17D6RBQ6 530 aa14.34□□□□□ -0.11
RCCD1-209ENST00000557750 USP17L19D6RCP7 530 aa14.34□□□□□ -0.11
RCCD1-209ENST00000557750 USP17L20D6RJB6 530 aa14.34□□□□□ -0.11
RCCD1-209ENST00000557750 CYP2C8P10632 490 aa14.34□□□□□ -0.11
RCCD1-209ENST00000557750 CASTP20810 708 aaKnown RBP14.34□□□□□ -0.11
RCCD1-209ENST00000557750 HOXD10P28358 340 aa14.34□□□□□ -0.11
RCCD1-209ENST00000557750 GRK4P32298 578 aa14.34□□□□□ -0.11
RCCD1-209ENST00000557750 USP17L24Q0WX57 530 aa14.34□□□□□ -0.11
RCCD1-209ENST00000557750 PNMA1Q8ND90 353 aa14.34□□□□□ -0.11
RCCD1-209ENST00000557750 RAET1EQ8TD07 263 aa14.34□□□□□ -0.11
RCCD1-209ENST00000557750 TMEM87BQ96K49 555 aa14.34□□□□□ -0.11
RCCD1-209ENST00000557750 TCEANC2Q96MN5 208 aa14.34□□□□□ -0.11
RCCD1-209ENST00000557750 PARK7Q99497 189 aaKnown RBP14.34□□□□□ -0.11
RCCD1-209ENST00000557750 NUP88Q99567 741 aaPredicted RBP14.34□□□□□ -0.11
RCCD1-209ENST00000557750 LRRC2Q9BYS8 371 aa14.34□□□□□ -0.11
RCCD1-209ENST00000557750 SLC45A1Q9Y2W3 748 aa14.34□□□□□ -0.11
RCCD1-209ENST00000557750 CCL5P13501 91 aa14.33□□□□□ -0.11
RCCD1-209ENST00000557750 CPA1P15085 419 aa14.33□□□□□ -0.11
RCCD1-209ENST00000557750 HOXA7P31268 230 aaPredicted RBP14.33□□□□□ -0.11
RCCD1-209ENST00000557750 SLC1A4P43007 532 aa14.33□□□□□ -0.11
RCCD1-209ENST00000557750 ANAPC15P60006 121 aa14.33□□□□□ -0.11
RCCD1-209ENST00000557750 FGD1P98174 961 aa14.33□□□□□ -0.11
RCCD1-209ENST00000557750 SEC23AQ15436 765 aa14.33□□□□□ -0.11
RCCD1-209ENST00000557750 FAM83BQ5T0W9 1011 aa14.33□□□□□ -0.11
RCCD1-209ENST00000557750 SMCR8Q8TEV9 937 aaPredicted RBP14.33□□□□□ -0.11
RCCD1-209ENST00000557750 ANKS1AQ92625 1134 aa14.33□□□□□ -0.11
RCCD1-209ENST00000557750 ASCC2Q9H1I8 757 aaPredicted RBP14.33□□□□□ -0.11
RCCD1-209ENST00000557750 MYPNQ86TC9 1320 aa14.33□□□□□ -0.12
RCCD1-209ENST00000557750 SAMD1Q6SPF0 538 aaPredicted RBP14.33□□□□□ -0.12
RCCD1-209ENST00000557750 NFXL1Q6ZNB6 911 aa14.33□□□□□ -0.12
RCCD1-209ENST00000557750 RASGRP2Q7LDG7 609 aa14.33□□□□□ -0.12
RCCD1-209ENST00000557750 UBE2Q1Q7Z7E8 422 aa14.33□□□□□ -0.12
RCCD1-209ENST00000557750 IGDCC4Q8TDY8 1250 aa14.33□□□□□ -0.12
RCCD1-209ENST00000557750 MTA3Q9BTC8 594 aa14.33□□□□□ -0.12
RCCD1-209ENST00000557750 BACH2Q9BYV9 841 aa14.33□□□□□ -0.12
RCCD1-209ENST00000557750 C22orf23Q9BZE7 217 aa14.33□□□□□ -0.12
RCCD1-209ENST00000557750 GPHNQ9NQX3 736 aaPredicted RBP14.33□□□□□ -0.12
RCCD1-209ENST00000557750 RBM27Q9P2N5 1060 aaKnown RBP14.33□□□□□ -0.12
RCCD1-209ENST00000557750 SH2B2O14492 632 aaPredicted RBP14.32□□□□□ -0.12
RCCD1-209ENST00000557750 FLOT1O75955 427 aa14.32□□□□□ -0.12
RCCD1-209ENST00000557750 GJB1P08034 283 aa14.32□□□□□ -0.12
RCCD1-209ENST00000557750 BMP3P12645 472 aa14.32□□□□□ -0.12
RCCD1-209ENST00000557750 GJA8P48165 433 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms