RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 NSFL1CQ9UNZ2 370 aaKnown RBP19.3■□□□□ 0.68
SYNE3-204ENST00000555759 DTNBO60941 627 aa19.3■□□□□ 0.68
SYNE3-204ENST00000555759 HEXIM1O94992 359 aaKnown RBP19.3■□□□□ 0.68
SYNE3-204ENST00000555759 EEF1GP26641 437 aaKnown RBP19.3■□□□□ 0.68
SYNE3-204ENST00000555759 RBL2Q08999 1139 aa19.3■□□□□ 0.68
SYNE3-204ENST00000555759 HERC4Q5GLZ8 1057 aaPredicted RBP19.3■□□□□ 0.68
SYNE3-204ENST00000555759 ENOX1Q8TC92 643 aaKnown RBP19.3■□□□□ 0.68
SYNE3-204ENST00000555759 STAT1P42224 750 aa19.29■□□□□ 0.68
SYNE3-204ENST00000555759 CFAP61Q8NHU2 1237 aa19.29■□□□□ 0.68
SYNE3-204ENST00000555759 FBXO41Q8TF61 875 aa19.29■□□□□ 0.68
SYNE3-204ENST00000555759 LZTS2Q9BRK4 669 aa19.29■□□□□ 0.68
SYNE3-204ENST00000555759 CLIC4Q9Y696 253 aa19.29■□□□□ 0.68
SYNE3-204ENST00000555759 FANCAO15360 1455 aa19.29■□□□□ 0.68
SYNE3-204ENST00000555759 ADCY9O60503 1353 aa19.29■□□□□ 0.68
SYNE3-204ENST00000555759 SNX29Q8TEQ0 813 aa19.29■□□□□ 0.68
SYNE3-204ENST00000555759 DPH5Q9H2P9 285 aa19.29■□□□□ 0.68
SYNE3-204ENST00000555759 PLEKHA4Q9H4M7 779 aa19.29■□□□□ 0.68
SYNE3-204ENST00000555759 PPFIA2O75334 1257 aa19.29■□□□□ 0.68
SYNE3-204ENST00000555759 TXKP42681 527 aa19.29■□□□□ 0.68
SYNE3-204ENST00000555759 SEPT2Q15019 361 aa19.29■□□□□ 0.68
SYNE3-204ENST00000555759 BUB1O43683 1085 aa19.29■□□□□ 0.68
SYNE3-204ENST00000555759 DBN1Q16643 649 aa19.29■□□□□ 0.68
SYNE3-204ENST00000555759 HIBCHQ6NVY1 386 aaPredicted RBP19.29■□□□□ 0.68
SYNE3-204ENST00000555759 STAMQ92783 540 aa19.29■□□□□ 0.68
SYNE3-204ENST00000555759 TUBB6Q9BUF5 446 aa19.29■□□□□ 0.68
SYNE3-204ENST00000555759 A0A0D9SFI3 127 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 SESN3P58005 492 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 GSDMBQ8TAX9 411 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 KRT12Q99456 494 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 SPZ1Q9BXG8 430 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 ARHGAP42A6NI28 874 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 BAG2O95816 211 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 ZNF827Q17R98 1081 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 FBXO31Q5XUX0 539 aaPredicted RBP19.28■□□□□ 0.68
SYNE3-204ENST00000555759 XAGE2Q96GT9 111 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 IQSEC3Q9UPP2 1182 aaPredicted RBP19.28■□□□□ 0.68
SYNE3-204ENST00000555759 ZWINTO95229 277 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 ARL1P40616 181 aaPredicted RBP19.28■□□□□ 0.68
SYNE3-204ENST00000555759 LRRC8CQ8TDW0 803 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 EPB41L5Q9HCM4 733 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 ADGRL2O95490 1459 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 ENC1O14682 589 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 SCRN1Q12765 414 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 PLA2G4DQ86XP0 818 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 ATP2A3Q93084 1043 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 SUCLG2Q96I99 432 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 TSC22D3Q99576 134 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 MAGEF1Q9HAY2 307 aa19.28■□□□□ 0.68
SYNE3-204ENST00000555759 PTPRTO14522 1441 aa19.27■□□□□ 0.68
SYNE3-204ENST00000555759 RNMTO43148 476 aaKnown RBP19.27■□□□□ 0.68
SYNE3-204ENST00000555759 EIF3BP55884 814 aaKnown RBP19.27■□□□□ 0.68
SYNE3-204ENST00000555759 PLBD2Q8NHP8 589 aa19.27■□□□□ 0.68
SYNE3-204ENST00000555759 CTNND1O60716 968 aaKnown RBP19.27■□□□□ 0.68
SYNE3-204ENST00000555759 U2AF1L4Q8WU68 220 aaKnown RBP19.27■□□□□ 0.68
SYNE3-204ENST00000555759 H2AFZP0C0S5 128 aa19.27■□□□□ 0.68
SYNE3-204ENST00000555759 H2AFVQ71UI9 128 aa19.27■□□□□ 0.68
SYNE3-204ENST00000555759 BZW2Q9Y6E2 419 aaKnown RBP19.27■□□□□ 0.68
SYNE3-204ENST00000555759 EDC4Q6P2E9 1401 aaKnown RBP19.27■□□□□ 0.67
SYNE3-204ENST00000555759 PASKQ96RG2 1323 aa19.27■□□□□ 0.67
SYNE3-204ENST00000555759 C6orf229H3BNL8 230 aa19.26■□□□□ 0.67
SYNE3-204ENST00000555759 THAP12O43422 761 aa19.26■□□□□ 0.67
SYNE3-204ENST00000555759 RPN1P04843 607 aaKnown RBP19.26■□□□□ 0.67
SYNE3-204ENST00000555759 PDIA3P30101 505 aaKnown RBP19.26■□□□□ 0.67
SYNE3-204ENST00000555759 NT5C3AQ9H0P0 336 aa19.26■□□□□ 0.67
SYNE3-204ENST00000555759 CYP2C19P33261 490 aa19.26■□□□□ 0.67
SYNE3-204ENST00000555759 NUP153P49790 1475 aaKnown RBP19.26■□□□□ 0.67
SYNE3-204ENST00000555759 NCAPGQ9BPX3 1015 aa19.26■□□□□ 0.67
SYNE3-204ENST00000555759 MYL10Q9BUA6 226 aa19.26■□□□□ 0.67
SYNE3-204ENST00000555759 OSBPL5Q9H0X9 879 aaPredicted RBP19.26■□□□□ 0.67
SYNE3-204ENST00000555759 EXOC7Q9UPT5 735 aa19.26■□□□□ 0.67
SYNE3-204ENST00000555759 RIC8AQ9NPQ8 531 aa19.26■□□□□ 0.67
SYNE3-204ENST00000555759 PPP1R21Q6ZMI0 780 aa19.25■□□□□ 0.67
SYNE3-204ENST00000555759 DENND2AQ9ULE3 1009 aa19.25■□□□□ 0.67
SYNE3-204ENST00000555759 SYCP2Q9BX26 1530 aa19.25■□□□□ 0.67
SYNE3-204ENST00000555759 IRS4O14654 1257 aaPredicted RBP19.25■□□□□ 0.67
SYNE3-204ENST00000555759 DYMQ7RTS9 669 aa19.25■□□□□ 0.67
SYNE3-204ENST00000555759 MYOCDQ8IZQ8 938 aa19.25■□□□□ 0.67
SYNE3-204ENST00000555759 TACC3Q9Y6A5 838 aa19.25■□□□□ 0.67
SYNE3-204ENST00000555759 LINC00301Q8NCQ3 95 aa19.25■□□□□ 0.67
SYNE3-204ENST00000555759 USP44Q9H0E7 712 aa19.25■□□□□ 0.67
SYNE3-204ENST00000555759 ARMT1Q9H993 441 aa19.25■□□□□ 0.67
SYNE3-204ENST00000555759 GLE1Q53GS7 698 aaKnown RBP19.25■□□□□ 0.67
SYNE3-204ENST00000555759 FNBP1Q96RU3 617 aa19.25■□□□□ 0.67
SYNE3-204ENST00000555759 PLCH2O75038 1416 aa19.25■□□□□ 0.67
SYNE3-204ENST00000555759 PSMD6Q15008 389 aa19.24■□□□□ 0.67
SYNE3-204ENST00000555759 ARHGEF18Q6ZSZ5 1173 aa19.24■□□□□ 0.67
SYNE3-204ENST00000555759 EPSTI1Q96J88 318 aa19.24■□□□□ 0.67
SYNE3-204ENST00000555759 MAN1A1P33908 653 aa19.24■□□□□ 0.67
SYNE3-204ENST00000555759 PPP4R1Q8TF05 950 aa19.24■□□□□ 0.67
SYNE3-204ENST00000555759 PUM3Q15397 648 aaKnown RBP19.24■□□□□ 0.67
SYNE3-204ENST00000555759 NBPF10Q6P3W6 841 aaKnown RBP19.24■□□□□ 0.67
SYNE3-204ENST00000555759 SRLQ86TD4 932 aa19.24■□□□□ 0.67
SYNE3-204ENST00000555759 CLIC6Q96NY7 704 aa19.24■□□□□ 0.67
SYNE3-204ENST00000555759 XRCC5P13010 732 aaKnown RBP19.24■□□□□ 0.67
SYNE3-204ENST00000555759 EHHADHQ08426 723 aa19.24■□□□□ 0.67
SYNE3-204ENST00000555759 CALCRLQ16602 461 aa19.24■□□□□ 0.67
SYNE3-204ENST00000555759 AKNAD1Q5T1N1 836 aa19.24■□□□□ 0.67
SYNE3-204ENST00000555759 KRT28Q7Z3Y7 464 aa19.24■□□□□ 0.67
SYNE3-204ENST00000555759 GABPB2Q8TAK5 448 aaPredicted RBP19.24■□□□□ 0.67
SYNE3-204ENST00000555759 ANKRD7Q92527 254 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms