RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 ESR1P03372 595 aa3.96□□□□□ -1.78
IFT43-208ENST00000554423 GLI1P08151 1106 aa3.96□□□□□ -1.78
IFT43-208ENST00000554423 CHRNEQ04844 493 aa3.96□□□□□ -1.78
IFT43-208ENST00000554423 GNL2Q13823 731 aaKnown RBP3.96□□□□□ -1.78
IFT43-208ENST00000554423 NBPF9Q3BBW0 867 aa3.96□□□□□ -1.78
IFT43-208ENST00000554423 ZNF394Q53GI3 561 aa3.96□□□□□ -1.78
IFT43-208ENST00000554423 NBPF12Q5TAG4 269 aaPredicted RBP3.96□□□□□ -1.78
IFT43-208ENST00000554423 MPZL3Q6UWV2 235 aa3.96□□□□□ -1.78
IFT43-208ENST00000554423 LILRA2Q8N149 483 aa3.96□□□□□ -1.78
IFT43-208ENST00000554423 TAB3Q8N5C8 712 aaPredicted RBP3.96□□□□□ -1.78
IFT43-208ENST00000554423 RGS22Q8NE09 1264 aa3.96□□□□□ -1.78
IFT43-208ENST00000554423 PDZD8Q8NEN9 1154 aa3.96□□□□□ -1.78
IFT43-208ENST00000554423 OR6P1Q8NGX9 317 aa3.96□□□□□ -1.78
IFT43-208ENST00000554423 ABHD4Q8TB40 342 aa3.96□□□□□ -1.78
IFT43-208ENST00000554423 CPLX3Q8WVH0 158 aa3.96□□□□□ -1.78
IFT43-208ENST00000554423 SMARCC1Q92922 1105 aaPredicted RBP3.96□□□□□ -1.78
IFT43-208ENST00000554423 MKRN2Q9H000 416 aaKnown RBP3.96□□□□□ -1.78
IFT43-208ENST00000554423 PRR13Q9NZ81 148 aa3.96□□□□□ -1.78
IFT43-208ENST00000554423 FBXL21Q9UKT6 434 aa3.96□□□□□ -1.78
IFT43-208ENST00000554423 ZNRF3Q9ULT6 936 aa3.96□□□□□ -1.78
IFT43-208ENST00000554423 FITM1A5D6W6 292 aa3.95□□□□□ -1.78
IFT43-208ENST00000554423 LRRC10BA6NIK2 292 aa3.95□□□□□ -1.78
IFT43-208ENST00000554423 TNFRSF10CO14798 259 aa3.95□□□□□ -1.78
IFT43-208ENST00000554423 PSPNO60542 156 aa3.95□□□□□ -1.78
IFT43-208ENST00000554423 DNAJA2O60884 412 aa3.95□□□□□ -1.78
IFT43-208ENST00000554423 RECKO95980 971 aa3.95□□□□□ -1.78
IFT43-208ENST00000554423 HK2P52789 917 aa3.95□□□□□ -1.78
IFT43-208ENST00000554423 RBM10P98175 930 aaKnown RBP3.95□□□□□ -1.78
IFT43-208ENST00000554423 SNX17Q15036 470 aa3.95□□□□□ -1.78
IFT43-208ENST00000554423 NT5DC4Q86YG4 428 aa3.95□□□□□ -1.78
IFT43-208ENST00000554423 CCDC144CPQ8IYA2 1237 aa3.95□□□□□ -1.78
IFT43-208ENST00000554423 RBBP8NLQ8NC74 664 aaPredicted RBP3.95□□□□□ -1.78
IFT43-208ENST00000554423 GPRASP2Q96D09 838 aa3.95□□□□□ -1.78
IFT43-208ENST00000554423 VWCEQ96DN2 955 aa3.95□□□□□ -1.78
IFT43-208ENST00000554423 CCSER2Q9H7U1 834 aa3.95□□□□□ -1.78
IFT43-208ENST00000554423 PCDHB12Q9Y5F1 795 aa3.95□□□□□ -1.78
IFT43-208ENST00000554423 PCDHGB7Q9Y5F8 929 aa3.95□□□□□ -1.78
IFT43-208ENST00000554423 PCDHA11Q9Y5I1 949 aa3.95□□□□□ -1.78
IFT43-208ENST00000554423 SIGLEC6O43699 453 aa3.94□□□□□ -1.78
IFT43-208ENST00000554423 GUCY2CP25092 1073 aa3.94□□□□□ -1.78
IFT43-208ENST00000554423 NOP2P46087 812 aaKnown RBP3.94□□□□□ -1.78
IFT43-208ENST00000554423 EIF6P56537 245 aaKnown RBP3.94□□□□□ -1.78
IFT43-208ENST00000554423 PAK2Q13177 524 aa3.94□□□□□ -1.78
IFT43-208ENST00000554423 TCEAL1Q15170 157 aa3.94□□□□□ -1.78
IFT43-208ENST00000554423 SLC14A2Q15849 920 aa3.94□□□□□ -1.78
IFT43-208ENST00000554423 NOL9Q5SY16 702 aaKnown RBP3.94□□□□□ -1.78
IFT43-208ENST00000554423 CWF19L1Q69YN2 538 aaKnown RBP3.94□□□□□ -1.78
IFT43-208ENST00000554423 ANKS4BQ8N8V4 417 aa3.94□□□□□ -1.78
IFT43-208ENST00000554423 LINC00116Q8NCU8 138 aa3.94□□□□□ -1.78
IFT43-208ENST00000554423 SEC16BQ96JE7 1060 aa3.94□□□□□ -1.78
IFT43-208ENST00000554423 SLC6A18Q96N87 628 aa3.94□□□□□ -1.78
IFT43-208ENST00000554423 PPP1R16BQ96T49 567 aa3.94□□□□□ -1.78
IFT43-208ENST00000554423 TGIF2Q9GZN2 237 aa3.94□□□□□ -1.78
IFT43-208ENST00000554423 ADAMTS10Q9H324 1103 aa3.94□□□□□ -1.78
IFT43-208ENST00000554423 SUCOQ9UBS9 1254 aaKnown RBP3.94□□□□□ -1.78
IFT43-208ENST00000554423 ZMYM5Q9UJ78 669 aa3.94□□□□□ -1.78
IFT43-208ENST00000554423 STRIP2Q9ULQ0 834 aa3.94□□□□□ -1.78
IFT43-208ENST00000554423 INPP5FQ9Y2H2 1132 aa3.94□□□□□ -1.78
IFT43-208ENST00000554423 DNAJC25-GNG10A0A024R161 153 aa3.93□□□□□ -1.78
IFT43-208ENST00000554423 HPXP02790 462 aa3.93□□□□□ -1.78
IFT43-208ENST00000554423 RPL10P27635 214 aaKnown RBP3.93□□□□□ -1.78
IFT43-208ENST00000554423 POLR2BP30876 1174 aaKnown RBP3.93□□□□□ -1.78
IFT43-208ENST00000554423 PMS1P54277 932 aaKnown RBP3.93□□□□□ -1.78
IFT43-208ENST00000554423 RACK1P63244 317 aaKnown RBP3.93□□□□□ -1.78
IFT43-208ENST00000554423 HDLBPQ00341 1268 aaKnown RBP3.93□□□□□ -1.78
IFT43-208ENST00000554423 AUHQ13825 339 aaKnown RBP3.93□□□□□ -1.78
IFT43-208ENST00000554423 NR0B2Q15466 257 aa3.93□□□□□ -1.78
IFT43-208ENST00000554423 ANKRD39Q53RE8 183 aa3.93□□□□□ -1.78
IFT43-208ENST00000554423 METTL16Q86W50 562 aaKnown RBP3.93□□□□□ -1.78
IFT43-208ENST00000554423 BHLHE22Q8NFJ8 381 aaPredicted RBP3.93□□□□□ -1.78
IFT43-208ENST00000554423 RASGRP4Q8TDF6 673 aa3.93□□□□□ -1.78
IFT43-208ENST00000554423 TCTN2Q96GX1 697 aa3.93□□□□□ -1.78
IFT43-208ENST00000554423 FAM84AQ96KN4 292 aa3.93□□□□□ -1.78
IFT43-208ENST00000554423 SLC9A7Q96T83 725 aa3.93□□□□□ -1.78
IFT43-208ENST00000554423 DSCC1Q9BVC3 393 aa3.93□□□□□ -1.78
IFT43-208ENST00000554423 SLC6A17Q9H1V8 727 aa3.93□□□□□ -1.78
IFT43-208ENST00000554423 ANTXR1Q9H6X2 564 aa3.93□□□□□ -1.78
IFT43-208ENST00000554423 CWC22Q9HCG8 908 aaKnown RBP3.93□□□□□ -1.78
IFT43-208ENST00000554423 CHST7Q9NS84 486 aa3.93□□□□□ -1.78
IFT43-208ENST00000554423 TCFL5Q9UL49 500 aa3.93□□□□□ -1.78
IFT43-208ENST00000554423 EFR3BQ9Y2G0 817 aa3.93□□□□□ -1.78
IFT43-208ENST00000554423 CARMIL2Q6F5E8 1435 aa3.93□□□□□ -1.78
IFT43-208ENST00000554423 WASH4PA8MWX3 477 aa3.92□□□□□ -1.78
IFT43-208ENST00000554423 GSNP06396 782 aa3.92□□□□□ -1.78
IFT43-208ENST00000554423 SYPP08247 313 aa3.92□□□□□ -1.78
IFT43-208ENST00000554423 KIR2DL1P43626 348 aaPredicted RBP3.92□□□□□ -1.78
IFT43-208ENST00000554423 KIR2DL2P43627 348 aaPredicted RBP3.92□□□□□ -1.78
IFT43-208ENST00000554423 SOX9P48436 509 aa3.92□□□□□ -1.78
IFT43-208ENST00000554423 KRTAP1-1Q07627 177 aa3.92□□□□□ -1.78
IFT43-208ENST00000554423 MLANAQ16655 118 aa3.92□□□□□ -1.78
IFT43-208ENST00000554423 RALGPS1Q5JS13 557 aa3.92□□□□□ -1.78
IFT43-208ENST00000554423 WAPLQ7Z5K2 1190 aa3.92□□□□□ -1.78
IFT43-208ENST00000554423 TMEM192Q8IY95 271 aa3.92□□□□□ -1.78
IFT43-208ENST00000554423 C7orf61Q8IZ16 206 aa3.92□□□□□ -1.78
IFT43-208ENST00000554423 USHBP1Q8N6Y0 703 aa3.92□□□□□ -1.78
IFT43-208ENST00000554423 SRRTQ9BXP5 876 aaKnown RBP3.92□□□□□ -1.78
IFT43-208ENST00000554423 HDAC8Q9BY41 377 aa3.92□□□□□ -1.78
IFT43-208ENST00000554423 PRDM14Q9GZV8 571 aa3.92□□□□□ -1.78
IFT43-208ENST00000554423 PHAXQ9H814 394 aaKnown RBP3.92□□□□□ -1.78
IFT43-208ENST00000554423 GINM1Q9NU53 330 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms