RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 DGKHQ86XP1 1220 aa9.05□□□□□ -0.96
NPAS3-213ENST00000552874 FBXL16Q8N461 479 aa9.05□□□□□ -0.96
NPAS3-213ENST00000552874 REPS2Q8NFH8 660 aa9.05□□□□□ -0.96
NPAS3-213ENST00000552874 NCOA7Q8NI08 942 aa9.05□□□□□ -0.96
NPAS3-213ENST00000552874 LPAR1Q92633 364 aa9.05□□□□□ -0.96
NPAS3-213ENST00000552874 GMCL1Q96IK5 515 aa9.05□□□□□ -0.96
NPAS3-213ENST00000552874 ZSCAN10Q96SZ4 725 aaPredicted RBP9.05□□□□□ -0.96
NPAS3-213ENST00000552874 BACH2Q9BYV9 841 aa9.05□□□□□ -0.96
NPAS3-213ENST00000552874 ARHGEF10LQ9HCE6 1279 aa9.05□□□□□ -0.96
NPAS3-213ENST00000552874 CLIP2Q9UDT6 1046 aa9.05□□□□□ -0.96
NPAS3-213ENST00000552874 MYH7BA7E2Y1 1941 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 WDR81Q562E7 1941 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 POTEB2H3BUK9 544 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 FOXN1O15353 648 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 MAP3K13O43283 966 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 CA12O43570 354 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 PRC1O43663 620 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 CYP2C8P10632 490 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 HSPA8P11142 646 aaKnown RBP9.04□□□□□ -0.96
NPAS3-213ENST00000552874 PDHBP11177 359 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 TOP1P11387 765 aaKnown RBP9.04□□□□□ -0.96
NPAS3-213ENST00000552874 RBM25P49756 843 aaKnown RBP9.04□□□□□ -0.96
NPAS3-213ENST00000552874 ANAPC15P60006 121 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 TROAPQ12815 778 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 FAM83BQ5T0W9 1011 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 RNF20Q5VTR2 975 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 GADL1Q6ZQY3 521 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 CATSPERGQ6ZRH7 1159 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 FASTKD5Q7L8L6 764 aaKnown RBP9.04□□□□□ -0.96
NPAS3-213ENST00000552874 CHST3Q7LGC8 479 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 SGMS1Q86VZ5 419 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 TCEANC2Q96MN5 208 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 TTC14Q96N46 770 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 NUP88Q99567 741 aaPredicted RBP9.04□□□□□ -0.96
NPAS3-213ENST00000552874 TM6SF1Q9BZW5 370 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 ASCC2Q9H1I8 757 aaPredicted RBP9.04□□□□□ -0.96
NPAS3-213ENST00000552874 RPAP3Q9H6T3 665 aaPredicted RBP9.04□□□□□ -0.96
NPAS3-213ENST00000552874 SH2D4AQ9H788 454 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 ZSWIM6Q9HCJ5 1215 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 TXNRD2Q9NNW7 524 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 TOMM22Q9NS69 142 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 FBXO28Q9NVF7 368 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.04□□□□□ -0.96
NPAS3-213ENST00000552874 ADAMTS5Q9UNA0 930 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 MYPNQ86TC9 1320 aa9.04□□□□□ -0.96
NPAS3-213ENST00000552874 MYH15Q9Y2K3 1946 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 F5H6K3 240 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 PLA2G6O60733 806 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 HSPA1AP0DMV8 641 aaKnown RBP9.03□□□□□ -0.96
NPAS3-213ENST00000552874 HSPA1BP0DMV9 641 aaKnown RBP9.03□□□□□ -0.96
NPAS3-213ENST00000552874 RPS6KB1P23443 525 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 CTGFP29279 349 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 MCM5P33992 734 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 LIFRP42702 1097 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 MAP2K1Q02750 393 aaPredicted RBP9.03□□□□□ -0.96
NPAS3-213ENST00000552874 KLRC3Q07444 240 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 TOB2Q14106 344 aaPredicted RBP9.03□□□□□ -0.96
NPAS3-213ENST00000552874 KRT32Q14532 448 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 PPP4R3BQ5MIZ7 849 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 C17orf99Q6UX52 265 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 BTNL9Q6UXG8 535 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 RALYLQ86SE5 291 aaKnown RBP9.03□□□□□ -0.96
NPAS3-213ENST00000552874 IQCA1Q86XH1 822 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 SPICE1Q8N0Z3 855 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 PNMA1Q8ND90 353 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 NEK1Q96PY6 1258 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 FEZ1Q99689 392 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 LRRC2Q9BYS8 371 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 GOPCQ9HD26 462 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 MORF4L1Q9UBU8 362 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 STX8Q9UNK0 236 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 DNAH12Q6ZR08 3092 aa9.03□□□□□ -0.96
NPAS3-213ENST00000552874 KIAA0100Q14667 2235 aaKnown RBP9.03□□□□□ -0.96
NPAS3-213ENST00000552874 USP17L15C9J2P7 530 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 USP17L13C9JLJ4 530 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 USP17L11C9JVI0 530 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 USP17L18D6R9N7 530 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 USP17L22D6RA61 530 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 USP17L17D6RBQ6 530 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 USP17L19D6RCP7 530 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 USP17L20D6RJB6 530 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 TLR2O60603 784 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 PEX10O60683 326 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 ALDH1A1P00352 501 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 ZKSCAN1P17029 563 aaPredicted RBP9.02□□□□□ -0.97
NPAS3-213ENST00000552874 EVCP57679 992 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 HERVK_113P62684 666 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 ZNF543Q08ER8 600 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 USP17L24Q0WX57 530 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 TAF1CQ15572 869 aaPredicted RBP9.02□□□□□ -0.97
NPAS3-213ENST00000552874 CCDC178Q5BJE1 867 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 SLFN13Q68D06 897 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 DHX32Q7L7V1 743 aaKnown RBP9.02□□□□□ -0.97
NPAS3-213ENST00000552874 DCAF4Q8WV16 495 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 TMEM87BQ96K49 555 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 JAKMIP1Q96N16 626 aaKnown RBP9.02□□□□□ -0.97
NPAS3-213ENST00000552874 TBC1D32Q96NH3 1257 aa9.02□□□□□ -0.97
NPAS3-213ENST00000552874 PARK7Q99497 189 aaKnown RBP9.02□□□□□ -0.97
NPAS3-213ENST00000552874 P2RX7Q99572 595 aaKnown RBP9.02□□□□□ -0.97
NPAS3-213ENST00000552874 TMOD4Q9NZQ9 345 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms