RNA–Protein interactions for RNA: ENST00000552548.5

PFDN5-217, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-217ENST00000552548 RPAP3Q9H6T3 665 aaPredicted RBP8.29□□□□□ -1.08
PFDN5-217ENST00000552548 VCPKMTQ9H867 229 aa8.29□□□□□ -1.08
PFDN5-217ENST00000552548 KAT14Q9H8E8 782 aa8.29□□□□□ -1.08
PFDN5-217ENST00000552548 TXNRD2Q9NNW7 524 aa8.29□□□□□ -1.08
PFDN5-217ENST00000552548 ISY1Q9ULR0 285 aaKnown RBP8.29□□□□□ -1.08
PFDN5-217ENST00000552548 KCNH4Q9UQ05 1017 aa8.29□□□□□ -1.08
PFDN5-217ENST00000552548 CCL15-CCL14A0A0B4J2E2 113 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 A0A0G2JLL6 359 aaPredicted RBP8.28□□□□□ -1.08
PFDN5-217ENST00000552548 PALM3A6NDB9 673 aaPredicted RBP8.28□□□□□ -1.08
PFDN5-217ENST00000552548 CCDC69A6NI79 296 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 TMEM232C9JQI7 657 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 PFKFB2O60825 505 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 SNHG28P0DPA3 235 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 LIFRP42702 1097 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 C1QTNF8P60827 252 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 FGD1P98174 961 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 ZNF543Q08ER8 600 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 PPIL2Q13356 520 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 PKP1Q13835 747 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 CCL15Q16663 113 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 Q3C1V9 767 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 PRRT2Q7Z6L0 340 aaPredicted RBP8.28□□□□□ -1.08
PFDN5-217ENST00000552548 SGMS1Q86VZ5 419 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 IQCA1Q86XH1 822 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 DGKHQ86XP1 1220 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 TBC1D5Q92609 795 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 ATG4CQ96DT6 458 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 TMEM87BQ96K49 555 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 CAPNS2Q96L46 248 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 PURBQ96QR8 312 aaKnown RBP8.28□□□□□ -1.08
PFDN5-217ENST00000552548 P2RX7Q99572 595 aaKnown RBP8.28□□□□□ -1.08
PFDN5-217ENST00000552548 UPF2Q9HAU5 1272 aaKnown RBP8.28□□□□□ -1.08
PFDN5-217ENST00000552548 SLC12A7Q9Y666 1083 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 TRPM7Q96QT4 1865 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 CNTNAP5Q8WYK1 1306 aa8.28□□□□□ -1.08
PFDN5-217ENST00000552548 MYH8P13535 1937 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 ZBTB43O43298 467 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 CTGFP29279 349 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 METAP2P50579 478 aaKnown RBP eCLIP8.27□□□□□ -1.09
PFDN5-217ENST00000552548 EVCP57679 992 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 GUCY1B3Q02153 619 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 PPATQ06203 517 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 PKN1Q16512 942 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 SH3D19Q5HYK7 790 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 CCDC174Q6PII3 467 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 TMTC3Q6ZXV5 915 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 FANCBQ8NB91 859 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 NSUN7Q8NE18 718 aaKnown RBP8.27□□□□□ -1.09
PFDN5-217ENST00000552548 GPKOWQ92917 476 aaPredicted RBP eCLIP8.27□□□□□ -1.09
PFDN5-217ENST00000552548 KIFC2Q96AC6 838 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 COA7Q96BR5 231 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 AGBL1Q96MI9 1066 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 PIGSQ96S52 555 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 KIAA1683Q9H0B3 1180 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 ALDH8A1Q9H2A2 487 aaPredicted RBP8.27□□□□□ -1.09
PFDN5-217ENST00000552548 JMJD4Q9H9V9 463 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 BTBD7Q9P203 1132 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 RIPK3Q9Y572 518 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 ZNF536O15090 1300 aa8.27□□□□□ -1.09
PFDN5-217ENST00000552548 RASSF10A6NK89 507 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 KLRF2D3W0D1 207 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 PCP11498 1178 aaKnown RBP8.26□□□□□ -1.09
PFDN5-217ENST00000552548 BMP3P12645 472 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 SLC1A4P43007 532 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 RTN1Q16799 776 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 DEFB115Q30KQ5 88 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 FOXD4L5Q5VV16 416 aaPredicted RBP8.26□□□□□ -1.09
PFDN5-217ENST00000552548 CATSPERGQ6ZRH7 1159 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 HOMER1Q86YM7 354 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 ADGRF4Q8IZF3 695 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 GMCL1P1Q8NEA9 526 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 REPS2Q8NFH8 660 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 FOXD4L4Q8WXT5 416 aaPredicted RBP8.26□□□□□ -1.09
PFDN5-217ENST00000552548 GTF3C6Q969F1 213 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 ZFP91Q96JP5 570 aaPredicted RBP8.26□□□□□ -1.09
PFDN5-217ENST00000552548 TANGO6Q9C0B7 1094 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 ARHGAP39Q9C0H5 1083 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 ASCC2Q9H1I8 757 aaPredicted RBP8.26□□□□□ -1.09
PFDN5-217ENST00000552548 SLKQ9H2G2 1235 aaPredicted RBP8.26□□□□□ -1.09
PFDN5-217ENST00000552548 ARHGEF10LQ9HCE6 1279 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 RAVER2Q9HCJ3 691 aaKnown RBP8.26□□□□□ -1.09
PFDN5-217ENST00000552548 CREBZFQ9NS37 354 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 CPA4Q9UI42 421 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 PRR12Q9ULL5 1215 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 LIMCH1Q9UPQ0 1083 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 V9GY48 417 aaPredicted RBP8.26□□□□□ -1.09
PFDN5-217ENST00000552548 WDR19Q8NEZ3 1342 aa8.26□□□□□ -1.09
PFDN5-217ENST00000552548 WDR33Q9C0J8 1336 aaKnown RBP8.26□□□□□ -1.09
PFDN5-217ENST00000552548 MYH4Q9Y623 1939 aa8.25□□□□□ -1.09
PFDN5-217ENST00000552548 ZSWIM8A7E2V4 1837 aa8.25□□□□□ -1.09
PFDN5-217ENST00000552548 ERICH2A1L162 156 aa8.25□□□□□ -1.09
PFDN5-217ENST00000552548 PTPDC1A2A3K4 754 aa8.25□□□□□ -1.09
PFDN5-217ENST00000552548 FAM205CA6NFA0 338 aa8.25□□□□□ -1.09
PFDN5-217ENST00000552548 SPDYE16A6NNV3 312 aaPredicted RBP8.25□□□□□ -1.09
PFDN5-217ENST00000552548 K7ELQ4 463 aaPredicted RBP8.25□□□□□ -1.09
PFDN5-217ENST00000552548 PDHXO00330 501 aa8.25□□□□□ -1.09
PFDN5-217ENST00000552548 OPLAHO14841 1288 aa8.25□□□□□ -1.09
PFDN5-217ENST00000552548 FLOT1O75955 427 aa8.25□□□□□ -1.09
PFDN5-217ENST00000552548 TBC1D8O95759 1140 aa8.25□□□□□ -1.09
PFDN5-217ENST00000552548 HMGB1P09429 215 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms